| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is yaiI [C]
Identifier: 34497223
GI number: 34497223
Start: 1923223
End: 1923666
Strand: Direct
Name: yaiI [C]
Synonym: CV_1768
Alternate gene names: 34497223
Gene position: 1923223-1923666 (Clockwise)
Preceding gene: 34497203
Following gene: 34497228
Centisome position: 40.48
GC content: 68.24
Gene sequence:
>444_bases ATGACGATCTGGGTAGACGCCGACGCCTGTCCCAAGGTGATACGGGAAGTGCTGTGCCGCGCGGCGCAGCGCACCGGCGT GGAGCTGGTGTTCGTCGCCAACCAGCTGCTGACGGTGCCGAAGGCGCCGAATATCCGCGCGCTGCAGGTGCCCAAGGGCT TCGACGTGGCCGACAACGAGATCGCCCGCCGCATCCAGCCGACGGACCTGTTGATCACCGGCGACATTCCGCTGGCGTCG GAGGCGCTGGCCAAGGGCGCGCAGGCGCTGAACTGGCGCGGCGACGCCTTTTCCAAGGAGACCATCGCCGCCCAACTGAC GATGCGGGACTTCATGGATACGCTGCGCGCCAGCGGCGTGCAGACCGAGGGGCCGCCGCCCTTGAGCCAGGCGGATCGGC AGGCTTTTGCCCGACAGTTGGATATCTGGCTGGCGCGGCGGTAG
Upstream 100 bases:
>100_bases TATCTCCTTGACATTTTTGGCGGGCGCGCAGGATAGCGGATTCTCATGTCATGGACAAGGGCGGGTATCATGGCGGCCTG TCGATAGAGAAAGATGCGAT
Downstream 100 bases:
>100_bases GGCGGAAGTCCGGCTCAGGCCGGGCGTTCCCTTAAGCCATGGCCGCAGGGTGATGATGTCCTGGCACCAATTCCGCCTGG TAGGCGGGTCAGGGGGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTIWVDADACPKVIREVLCRAAQRTGVELVFVANQLLTVPKAPNIRALQVPKGFDVADNEIARRIQPTDLLITGDIPLAS EALAKGAQALNWRGDAFSKETIAAQLTMRDFMDTLRASGVQTEGPPPLSQADRQAFARQLDIWLARR
Sequences:
>Translated_147_residues MTIWVDADACPKVIREVLCRAAQRTGVELVFVANQLLTVPKAPNIRALQVPKGFDVADNEIARRIQPTDLLITGDIPLAS EALAKGAQALNWRGDAFSKETIAAQLTMRDFMDTLRASGVQTEGPPPLSQADRQAFARQLDIWLARR >Mature_146_residues TIWVDADACPKVIREVLCRAAQRTGVELVFVANQLLTVPKAPNIRALQVPKGFDVADNEIARRIQPTDLLITGDIPLASE ALAKGAQALNWRGDAFSKETIAAQLTMRDFMDTLRASGVQTEGPPPLSQADRQAFARQLDIWLARR
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family
Homologues:
Organism=Escherichia coli, GI87081732, Length=143, Percent_Identity=64.3356643356643, Blast_Score=180, Evalue=4e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1768_CHRVO (Q7NX61)
Other databases:
- EMBL: AE016825 - RefSeq: NP_901438.1 - GeneID: 2550710 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_1768 - NMPDR: fig|243365.1.peg.1768 - HOGENOM: HBG363074 - OMA: PLASRCV - PhylomeDB: Q7NX61 - BioCyc: CVIO243365:CV_1768-MONOMER - HAMAP: MF_00489 - InterPro: IPR003791
Pfam domain/function: PF02639 DUF188
EC number: NA
Molecular weight: Translated: 16165; Mature: 16034
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIWVDADACPKVIREVLCRAAQRTGVELVFVANQLLTVPKAPNIRALQVPKGFDVADNE CEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCEEEECCCCCCCCHHH IARRIQPTDLLITGDIPLASEALAKGAQALNWRGDAFSKETIAAQLTMRDFMDTLRASGV HHHHCCCCCEEEECCCCCHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC QTEGPPPLSQADRQAFARQLDIWLARR CCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIWVDADACPKVIREVLCRAAQRTGVELVFVANQLLTVPKAPNIRALQVPKGFDVADNE EEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCEEEECCCCCCCCHHH IARRIQPTDLLITGDIPLASEALAKGAQALNWRGDAFSKETIAAQLTMRDFMDTLRASGV HHHHCCCCCEEEECCCCCHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC QTEGPPPLSQADRQAFARQLDIWLARR CCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782