Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is 34497203

Identifier: 34497203

GI number: 34497203

Start: 1899096

End: 1900754

Strand: Direct

Name: 34497203

Synonym: CV_1748

Alternate gene names: NA

Gene position: 1899096-1900754 (Clockwise)

Preceding gene: 34497202

Following gene: 34497223

Centisome position: 39.97

GC content: 67.93

Gene sequence:

>1659_bases
ATGCTGACTTATTCCGCTCAGGCCAGCTCGCTGGCCAAGCCGACCGAAAAACCCTGGATGCTGTTGCTGCTGTGCTTCAT
CTGGCTGTGGCCCGGCATTCTGGGGCACGATCCCTGGAAACCGGACGAACCCTTCGTGCTGGCTGTCGCGCAAGGCATGC
TGGACAGCGGTAATTGGCTGCTGCCCACGCTCAACGGCGCGCCGTATCTCGAAAATCCCCCCTTGTACTACTGGCTGGCG
GCCGGCTGCATCAAGCTGTTCTCGTCCTGGCTGCTGCCCGCGCACGACGCGGCCCGGCTGGCGACGCCCTTGTTGATGTC
GCTGTCGCTGCTGCTGGCCGGCATGGCGGGCCGCGACCTGATAGGCCGCCGCCACGGCCGCAGCGTGGTGATGATACTGA
TAGGCTGCATCGGCCTGGTGGAGTCGGGCCACCAGCTGACGCCCAGCGTCGCCAGCTTCGCCGGCCTCACCGCCGCGTTC
TACGCGCTGTCGCTGGCGCTGCGCTCGCCAGGGCTCGCCGGCGCGGTATTGGGCGCGGCCAGCGTGGCCATCTTCCTGGG
CGGCAGCCTGCTGGACCTGGCGCTGATCTGGCTGGTGGCGCTGATGCTGCCCGCCTTCAGCGGCTGGCGGCGGAAGAACT
ACGCGATCACGCTGCTGCTGGGGCTGCTGCTGGCGCTGCCCGCCATCCTGGTATGGCCGATGCTGCTGCAGCGTCTGTAT
CCGGCGGTGTACGCCGAGTGGTGGGGCGGCTACGCGCTGGGGCAGACCAGCGGCTTCCATCATATCCGCCTGTTCCATGA
CTTCGGCTATTACAGCCTGAACGTGCTGTGGTTCGCTTTTCCGGCCTGGCCGCTCGCCTTGTGGACGCTGTACCGCCACC
GGCTGCCGCAGTCGCCCAAGCTGCAGCTGCCGCTGCTGTTCGCGCTGATGAACGCGGTGCTGCTGACGTTGTCGGACCGC
ACCAACATCACCGACGCGATGCCGCTGCTGCTGCCGCTGGCCGTGCTGGGCGCGGTGGAGCTGGACAATCTGCGGCGCGG
CGCCGCAGCCTTCCTCAACTGGTTCGCGCTGATGACCTTCGGCCTGTTCGGCCTGCTGGTGTGGCTGGGCTGGGCGGCGA
TGAACTATGGCTGGCCAGAGGGCTTGGCCGGGCGCGCGCAGTACTTCAGCCCCTTCTACCAGCCGCATGTCTCCTGGCTG
CAGGCTGCAGGCGGCCTGATTGCCACCCTGGTGTGGCTGTGGGCGCTGACCCGGCCCCATCTGCGCGGCCGCCAGGCGAT
CACCAACTGGGCGGCCGGGCTGACGCTGCTGTGGGGGCTGGGCATGACCTTGTGGCTGCCGTGGTTCGACGCCGCCAAGA
GTTACCGCCCGGTGGTGAACAGCATGCTGCGCAAGCTGCCTGCCACGGCCACCTGCATCGCGACGGAAAACCGCAACAGC
CTGGCCATGATCAGCTGGCGCTACTACGCCGGCATCGACCTGCTGTCCTTCCCATCCGGGGAGACGCCGCCGTGCGATTA
CTGGCTGGTGGTGCGCAGCAGCGAGGAGGGCGTGGCCGAGCCAGGCTGGCAGGTGCTGTGGACCGGCAACCGCCCGCGCG
AGCAGAACATGACCTTCGCGCTGCTGCAGCGGCTGCCGCAGGCGAAAGCGCCCAAGTAA

Upstream 100 bases:

>100_bases
TGGACCCCGAAAAAGGCAGCCTGCGGCTGCCTTTTTTCATTCCTGCGCAGCATGCGTGGGATAATCATCAGATCCTTCGG
AACAACAAGGTGGCAAACGG

Downstream 100 bases:

>100_bases
GGGCGGCCGGCTGCGAAGAAGCCGTTCCGGGTCAATGCCGGGACGGCTTTTTTCATGGCGGACAGCCGCCGGAGGACACA
TCCCCGGCATGCCGCCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyltransferase; Transmembrane Protein; Inner Membrane Protein; 4-Amino-4-Deoxy-L-Arabinose Transferase; Inner Membrane Transmembrane Protein; Glycosyl Transferase Family; Glycosyltransferase Pmt Family

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MLTYSAQASSLAKPTEKPWMLLLLCFIWLWPGILGHDPWKPDEPFVLAVAQGMLDSGNWLLPTLNGAPYLENPPLYYWLA
AGCIKLFSSWLLPAHDAARLATPLLMSLSLLLAGMAGRDLIGRRHGRSVVMILIGCIGLVESGHQLTPSVASFAGLTAAF
YALSLALRSPGLAGAVLGAASVAIFLGGSLLDLALIWLVALMLPAFSGWRRKNYAITLLLGLLLALPAILVWPMLLQRLY
PAVYAEWWGGYALGQTSGFHHIRLFHDFGYYSLNVLWFAFPAWPLALWTLYRHRLPQSPKLQLPLLFALMNAVLLTLSDR
TNITDAMPLLLPLAVLGAVELDNLRRGAAAFLNWFALMTFGLFGLLVWLGWAAMNYGWPEGLAGRAQYFSPFYQPHVSWL
QAAGGLIATLVWLWALTRPHLRGRQAITNWAAGLTLLWGLGMTLWLPWFDAAKSYRPVVNSMLRKLPATATCIATENRNS
LAMISWRYYAGIDLLSFPSGETPPCDYWLVVRSSEEGVAEPGWQVLWTGNRPREQNMTFALLQRLPQAKAPK

Sequences:

>Translated_552_residues
MLTYSAQASSLAKPTEKPWMLLLLCFIWLWPGILGHDPWKPDEPFVLAVAQGMLDSGNWLLPTLNGAPYLENPPLYYWLA
AGCIKLFSSWLLPAHDAARLATPLLMSLSLLLAGMAGRDLIGRRHGRSVVMILIGCIGLVESGHQLTPSVASFAGLTAAF
YALSLALRSPGLAGAVLGAASVAIFLGGSLLDLALIWLVALMLPAFSGWRRKNYAITLLLGLLLALPAILVWPMLLQRLY
PAVYAEWWGGYALGQTSGFHHIRLFHDFGYYSLNVLWFAFPAWPLALWTLYRHRLPQSPKLQLPLLFALMNAVLLTLSDR
TNITDAMPLLLPLAVLGAVELDNLRRGAAAFLNWFALMTFGLFGLLVWLGWAAMNYGWPEGLAGRAQYFSPFYQPHVSWL
QAAGGLIATLVWLWALTRPHLRGRQAITNWAAGLTLLWGLGMTLWLPWFDAAKSYRPVVNSMLRKLPATATCIATENRNS
LAMISWRYYAGIDLLSFPSGETPPCDYWLVVRSSEEGVAEPGWQVLWTGNRPREQNMTFALLQRLPQAKAPK
>Mature_552_residues
MLTYSAQASSLAKPTEKPWMLLLLCFIWLWPGILGHDPWKPDEPFVLAVAQGMLDSGNWLLPTLNGAPYLENPPLYYWLA
AGCIKLFSSWLLPAHDAARLATPLLMSLSLLLAGMAGRDLIGRRHGRSVVMILIGCIGLVESGHQLTPSVASFAGLTAAF
YALSLALRSPGLAGAVLGAASVAIFLGGSLLDLALIWLVALMLPAFSGWRRKNYAITLLLGLLLALPAILVWPMLLQRLY
PAVYAEWWGGYALGQTSGFHHIRLFHDFGYYSLNVLWFAFPAWPLALWTLYRHRLPQSPKLQLPLLFALMNAVLLTLSDR
TNITDAMPLLLPLAVLGAVELDNLRRGAAAFLNWFALMTFGLFGLLVWLGWAAMNYGWPEGLAGRAQYFSPFYQPHVSWL
QAAGGLIATLVWLWALTRPHLRGRQAITNWAAGLTLLWGLGMTLWLPWFDAAKSYRPVVNSMLRKLPATATCIATENRNS
LAMISWRYYAGIDLLSFPSGETPPCDYWLVVRSSEEGVAEPGWQVLWTGNRPREQNMTFALLQRLPQAKAPK

Specific function: Unknown

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61189; Mature: 61189

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTYSAQASSLAKPTEKPWMLLLLCFIWLWPGILGHDPWKPDEPFVLAVAQGMLDSGNWL
CCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCHHCCCCCCCCCCCEEEEEHHHHHCCCCEE
LPTLNGAPYLENPPLYYWLAAGCIKLFSSWLLPAHDAARLATPLLMSLSLLLAGMAGRDL
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
IGRRHGRSVVMILIGCIGLVESGHQLTPSVASFAGLTAAFYALSLALRSPGLAGAVLGAA
HHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SVAIFLGGSLLDLALIWLVALMLPAFSGWRRKNYAITLLLGLLLALPAILVWPMLLQRLY
HHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAVYAEWWGGYALGQTSGFHHIRLFHDFGYYSLNVLWFAFPAWPLALWTLYRHRLPQSPK
HHHHHHHHCCEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LQLPLLFALMNAVLLTLSDRTNITDAMPLLLPLAVLGAVELDNLRRGAAAFLNWFALMTF
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLFGLLVWLGWAAMNYGWPEGLAGRAQYFSPFYQPHVSWLQAAGGLIATLVWLWALTRPH
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
LRGRQAITNWAAGLTLLWGLGMTLWLPWFDAAKSYRPVVNSMLRKLPATATCIATENRNS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
LAMISWRYYAGIDLLSFPSGETPPCDYWLVVRSSEEGVAEPGWQVLWTGNRPREQNMTFA
EEEEEEHHHHCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHH
LLQRLPQAKAPK
HHHHCCCCCCCC
>Mature Secondary Structure
MLTYSAQASSLAKPTEKPWMLLLLCFIWLWPGILGHDPWKPDEPFVLAVAQGMLDSGNWL
CCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCHHCCCCCCCCCCCEEEEEHHHHHCCCCEE
LPTLNGAPYLENPPLYYWLAAGCIKLFSSWLLPAHDAARLATPLLMSLSLLLAGMAGRDL
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
IGRRHGRSVVMILIGCIGLVESGHQLTPSVASFAGLTAAFYALSLALRSPGLAGAVLGAA
HHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SVAIFLGGSLLDLALIWLVALMLPAFSGWRRKNYAITLLLGLLLALPAILVWPMLLQRLY
HHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAVYAEWWGGYALGQTSGFHHIRLFHDFGYYSLNVLWFAFPAWPLALWTLYRHRLPQSPK
HHHHHHHHCCEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LQLPLLFALMNAVLLTLSDRTNITDAMPLLLPLAVLGAVELDNLRRGAAAFLNWFALMTF
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLFGLLVWLGWAAMNYGWPEGLAGRAQYFSPFYQPHVSWLQAAGGLIATLVWLWALTRPH
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
LRGRQAITNWAAGLTLLWGLGMTLWLPWFDAAKSYRPVVNSMLRKLPATATCIATENRNS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
LAMISWRYYAGIDLLSFPSGETPPCDYWLVVRSSEEGVAEPGWQVLWTGNRPREQNMTFA
EEEEEEHHHHCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHH
LLQRLPQAKAPK
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA