| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497185
Identifier: 34497185
GI number: 34497185
Start: 1871361
End: 1872728
Strand: Reverse
Name: 34497185
Synonym: CV_1730
Alternate gene names: NA
Gene position: 1872728-1871361 (Counterclockwise)
Preceding gene: 34497187
Following gene: 34497184
Centisome position: 39.42
GC content: 68.13
Gene sequence:
>1368_bases ATGGCCGCCACCCTGAAACTGTCGCAACTGATCAGCGCGCTCAGCTACGCGCTGGACATCACCGAAGGCCAGCCCGAGGG CCATTGCGTGCGCAGCTGCTGGATAGGCATGCACATCGGCCGGGCGCTGGGCCTGGCGCCGCAGGAATTGTGGGATCTCT ACTACGCCATCCTGCTGAAGGACCTGGGCTGCAGCAGCAACGCCGCCCGCATCTGCGAGCTGTACCGCACCGACGACCGC AGCTTCAAGCAGGACTTCAAGCAGGTGGGCGCCAGCCTGCCGCAAATGCTGGGCTTCGTGTTCAGCCACACCGGCACCCA TGCCGCCGGGTGGCGCGAGCGCGCGGCCTCCGTGGTCCAGGTGCTGCGACGGGGCAAAGAGATGGCCGACGAATTGATCA ACACCCGCTGCCACCGCGGCGCCGACATCGCCCGCCAGCTGCGCTTCAACGAGAACGTGGCCAACGGCATCCAGTATCTG GACGAGCACTGGGACGGCTCCGGCCGGCCGCTGGGGCTGCAGCGCGACGCCATTCCGCTGAACGCGCGCATCGCGCTGCT GGCCCAGGTGATAGACGTGTTCCACGTCACCCATGGCCGCCACGCGGCGCTGGACGAGGCGGTGCGCCGCGGCGGCGGCT GGTTCGACCCGGAACTGGTGGCCGCCTTCCGCGGCGCCAGCCGCGACACGGCGTTCTGGCAGCGCCTGGAATCCGACGAC ATAGAGCGCGCGGTGCTGGCGCTGGAACCCGCCCAGTGCACGGTGCCGCTGGACGAGGACTATATGGACGAGATCGCCGA GGGCTTCGGCCAAGTGGTGGACTCCAAGAGCCCGTTCACCGCCGGCCACAGCCAGCGCGTCGGCCACTACGCCGACCGCA TCGGCGAGGAGCTGGGCCTGAGTCCGCAGCGGCGGCGCTGGCTGAAGCGCGGCGCCTTGCTGCACGATGTGGGCAAGCTG GGCGTCAGCAACACCATCCTGGACAAGCCGGGCAAGTTGACCCCCGAAGAGTGGGAAGCGGTGAAACTTCACGCCAGCCA CACCGAAACCATACTCGGCCGCATCGAATCGTTCGCCGAACTGGCCAAGGTGGCCGGCGCCCACCATGAGCGGCTGGACG GCAAGGGCTACCCGCGCGGCCTGATGGCCAGCGAGATCGCGCTGGAAACCCGCGTCATCACCACCGCCGACATCTTCGAC GCCATCCACGCCGCCCGCCCCTACCATCCGGAAAACCCGGTGCCGGAAACGCTGGACATCATGCGGAAAAACCTGGGCAG CGCGCTGGACCCGGCCTGCTTCGAAGCGCTGGAAGCCGTGCTGAGGGAAGAGGACGCGCTGGAAAGCGACGCCATCTGCC TGACCTGA
Upstream 100 bases:
>100_bases CGTTCTGATTTTTATCTGAAAAACGACTGTCATTGCGAAAATGCCTCCCGCCACGCATAAACAAAACATCCCCACCACGC CCTACGGCAAGGGAGCGCCG
Downstream 100 bases:
>100_bases GCCATGTCCACGAACGAGAAGCTGGACCGCCTCGCCGCCGCCCTCCGGCTGGATTCGCCGGAGCGGGAAACCCTGCGCCT GCGCTTCGGCCTCGCCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MAATLKLSQLISALSYALDITEGQPEGHCVRSCWIGMHIGRALGLAPQELWDLYYAILLKDLGCSSNAARICELYRTDDR SFKQDFKQVGASLPQMLGFVFSHTGTHAAGWRERAASVVQVLRRGKEMADELINTRCHRGADIARQLRFNENVANGIQYL DEHWDGSGRPLGLQRDAIPLNARIALLAQVIDVFHVTHGRHAALDEAVRRGGGWFDPELVAAFRGASRDTAFWQRLESDD IERAVLALEPAQCTVPLDEDYMDEIAEGFGQVVDSKSPFTAGHSQRVGHYADRIGEELGLSPQRRRWLKRGALLHDVGKL GVSNTILDKPGKLTPEEWEAVKLHASHTETILGRIESFAELAKVAGAHHERLDGKGYPRGLMASEIALETRVITTADIFD AIHAARPYHPENPVPETLDIMRKNLGSALDPACFEALEAVLREEDALESDAICLT
Sequences:
>Translated_455_residues MAATLKLSQLISALSYALDITEGQPEGHCVRSCWIGMHIGRALGLAPQELWDLYYAILLKDLGCSSNAARICELYRTDDR SFKQDFKQVGASLPQMLGFVFSHTGTHAAGWRERAASVVQVLRRGKEMADELINTRCHRGADIARQLRFNENVANGIQYL DEHWDGSGRPLGLQRDAIPLNARIALLAQVIDVFHVTHGRHAALDEAVRRGGGWFDPELVAAFRGASRDTAFWQRLESDD IERAVLALEPAQCTVPLDEDYMDEIAEGFGQVVDSKSPFTAGHSQRVGHYADRIGEELGLSPQRRRWLKRGALLHDVGKL GVSNTILDKPGKLTPEEWEAVKLHASHTETILGRIESFAELAKVAGAHHERLDGKGYPRGLMASEIALETRVITTADIFD AIHAARPYHPENPVPETLDIMRKNLGSALDPACFEALEAVLREEDALESDAICLT >Mature_454_residues AATLKLSQLISALSYALDITEGQPEGHCVRSCWIGMHIGRALGLAPQELWDLYYAILLKDLGCSSNAARICELYRTDDRS FKQDFKQVGASLPQMLGFVFSHTGTHAAGWRERAASVVQVLRRGKEMADELINTRCHRGADIARQLRFNENVANGIQYLD EHWDGSGRPLGLQRDAIPLNARIALLAQVIDVFHVTHGRHAALDEAVRRGGGWFDPELVAAFRGASRDTAFWQRLESDDI ERAVLALEPAQCTVPLDEDYMDEIAEGFGQVVDSKSPFTAGHSQRVGHYADRIGEELGLSPQRRRWLKRGALLHDVGKLG VSNTILDKPGKLTPEEWEAVKLHASHTETILGRIESFAELAKVAGAHHERLDGKGYPRGLMASEIALETRVITTADIFDA IHAARPYHPENPVPETLDIMRKNLGSALDPACFEALEAVLREEDALESDAICLT
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50318; Mature: 50186
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATLKLSQLISALSYALDITEGQPEGHCVRSCWIGMHIGRALGLAPQELWDLYYAILLK CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH DLGCSSNAARICELYRTDDRSFKQDFKQVGASLPQMLGFVFSHTGTHAAGWRERAASVVQ HCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VLRRGKEMADELINTRCHRGADIARQLRFNENVANGIQYLDEHWDGSGRPLGLQRDAIPL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC NARIALLAQVIDVFHVTHGRHAALDEAVRRGGGWFDPELVAAFRGASRDTAFWQRLESDD HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHCCCH IERAVLALEPAQCTVPLDEDYMDEIAEGFGQVVDSKSPFTAGHSQRVGHYADRIGEELGL HHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC SPQRRRWLKRGALLHDVGKLGVSNTILDKPGKLTPEEWEAVKLHASHTETILGRIESFAE CHHHHHHHHHCHHHHHHHHHCCCCHHHCCCCCCCCCHHHHEEEEHHHHHHHHHHHHHHHH LAKVAGAHHERLDGKGYPRGLMASEIALETRVITTADIFDAIHAARPYHPENPVPETLDI HHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH MRKNLGSALDPACFEALEAVLREEDALESDAICLT HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEECC >Mature Secondary Structure AATLKLSQLISALSYALDITEGQPEGHCVRSCWIGMHIGRALGLAPQELWDLYYAILLK CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH DLGCSSNAARICELYRTDDRSFKQDFKQVGASLPQMLGFVFSHTGTHAAGWRERAASVVQ HCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VLRRGKEMADELINTRCHRGADIARQLRFNENVANGIQYLDEHWDGSGRPLGLQRDAIPL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC NARIALLAQVIDVFHVTHGRHAALDEAVRRGGGWFDPELVAAFRGASRDTAFWQRLESDD HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHCCCH IERAVLALEPAQCTVPLDEDYMDEIAEGFGQVVDSKSPFTAGHSQRVGHYADRIGEELGL HHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC SPQRRRWLKRGALLHDVGKLGVSNTILDKPGKLTPEEWEAVKLHASHTETILGRIESFAE CHHHHHHHHHCHHHHHHHHHCCCCHHHCCCCCCCCCHHHHEEEEHHHHHHHHHHHHHHHH LAKVAGAHHERLDGKGYPRGLMASEIALETRVITTADIFDAIHAARPYHPENPVPETLDI HHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH MRKNLGSALDPACFEALEAVLREEDALESDAICLT HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]