| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497184
Identifier: 34497184
GI number: 34497184
Start: 1870890
End: 1871357
Strand: Reverse
Name: 34497184
Synonym: CV_1729
Alternate gene names: NA
Gene position: 1871357-1870890 (Counterclockwise)
Preceding gene: 34497185
Following gene: 34497182
Centisome position: 39.39
GC content: 72.65
Gene sequence:
>468_bases ATGTCCACGAACGAGAAGCTGGACCGCCTCGCCGCCGCCCTCCGGCTGGATTCGCCGGAGCGGGAAACCCTGCGCCTGCG CTTCGGCCTCGCCTGCGCGCGCCGCGTCGCCCATCAGCTGGAAGATCGGGAAGTGCTGGCTTGCCTGGACGGGCTGGAAC GCTGGCTGGAGAGCGGATTGGACCGCGGCAGCCTGGCCGCGCTCGCCGCCCGCGCGGCGGCGCTGGCCGGCGCCCACCCC GGCTCCCGCTCGCTGGACGGCTGCGGCCACGCGGCGGTATCGGCCAGTTACGCGGTAGCCAAGGCGCTGGCGGGACAGGC GCTGCAGGCGGCGGATTACGCGGCCTACGCCGCCGTTTACGGACAAGGCGGCTATGGCGCGGTGTCGGAGCGGGAGTCTT TTCAGCCGGAATTCGACTGGCAGACGGACTGCCTGGCGGCGCTGGCCAAAGCCGCCGGCGATGGATGA
Upstream 100 bases:
>100_bases CCTGGGCAGCGCGCTGGACCCGGCCTGCTTCGAAGCGCTGGAAGCCGTGCTGAGGGAAGAGGACGCGCTGGAAAGCGACG CCATCTGCCTGACCTGAGCC
Downstream 100 bases:
>100_bases CAATGAGGTCACTGCCCCACTTTAGCGGAATGCGAGACATGCGCCCCCGCCGATACGCCGCGCCATGGCGGCCGACCTGG AACAAATGAACCGGATCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSTNEKLDRLAAALRLDSPERETLRLRFGLACARRVAHQLEDREVLACLDGLERWLESGLDRGSLAALAARAAALAGAHP GSRSLDGCGHAAVSASYAVAKALAGQALQAADYAAYAAVYGQGGYGAVSERESFQPEFDWQTDCLAALAKAAGDG
Sequences:
>Translated_155_residues MSTNEKLDRLAAALRLDSPERETLRLRFGLACARRVAHQLEDREVLACLDGLERWLESGLDRGSLAALAARAAALAGAHP GSRSLDGCGHAAVSASYAVAKALAGQALQAADYAAYAAVYGQGGYGAVSERESFQPEFDWQTDCLAALAKAAGDG >Mature_154_residues STNEKLDRLAAALRLDSPERETLRLRFGLACARRVAHQLEDREVLACLDGLERWLESGLDRGSLAALAARAAALAGAHPG SRSLDGCGHAAVSASYAVAKALAGQALQAADYAAYAAVYGQGGYGAVSERESFQPEFDWQTDCLAALAKAAGDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16194; Mature: 16063
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNEKLDRLAAALRLDSPERETLRLRFGLACARRVAHQLEDREVLACLDGLERWLESGL CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC DRGSLAALAARAAALAGAHPGSRSLDGCGHAAVSASYAVAKALAGQALQAADYAAYAAVY CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQGGYGAVSERESFQPEFDWQTDCLAALAKAAGDG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure STNEKLDRLAAALRLDSPERETLRLRFGLACARRVAHQLEDREVLACLDGLERWLESGL CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC DRGSLAALAARAAALAGAHPGSRSLDGCGHAAVSASYAVAKALAGQALQAADYAAYAAVY CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQGGYGAVSERESFQPEFDWQTDCLAALAKAAGDG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA