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The map label for this gene is rhtA [H]

Identifier: 34497181

GI number: 34497181

Start: 1867372

End: 1868154

Strand: Direct

Name: rhtA [H]

Synonym: CV_1726

Alternate gene names: 34497181

Gene position: 1867372-1868154 (Clockwise)

Preceding gene: 34497180

Following gene: 34497183

Centisome position: 39.3

GC content: 72.67

Gene sequence:

>783_bases
ATGTGCTGCGCGCAGTTCGGCGCGGCGCTGTCCCAGCCCGCGGCGCAGAGCCTGGGCGTATTTCGCGCCACCGCGCTGAA
GCTGGCGTTCGCGGCGGCGTTTTTGTGGCTGTGGCGTCGTCCGCCGTTGCGGCGCGCGCTGCGCGGCGAGCCCGTTCTGC
TTGGGCTCGGTTTGGCGATGGCAGGCCTGTTGCTGGGCTTCTTTGCCGCCTTGCGGACGCTGCCGCAAGGCTTGACCGTG
GCGATCACACTGCTGGGGCCGCTGGCGCTGGCCTGGGGCAAGGACAGGCGGCGCTGGCCCTGGCCCATGCTGGCCCTAGT
CGGGACGGTGCTGCTGGCGAGGCGCGAGGAGCGCTGGCTGATCGACGTCGCTGGCCTGGCTTGGGCGGGACTGTCCGCCG
CATGCTGGGCGGTTTACATTGTTCTGTTGCGGCGGGCCGGGGAAGTGTGCCGCGACGGGGACGGCGTCGCGCTGGCTTTG
CTGGTGGCGGCGTTGGCGGCCGCGCCCTGGATTTGGCTGGACGGCGGTGCCTGGCCCGATGCCTCCATGCTGCTGCGTTT
GGCGGGCTTGTCCCTGCTGATGCCCGCGCTGCCCTGCTTGCTGGAGCTGGAGGCCCTGCGCCGCATGCCAGCCGCCTCGT
TCGGCGTGCTGATGAGCCTGGAGCCCGCGCTCGCGGTGTCGGCGGGCGGCCTGCTGCTGGGACAAACGCCGGCGGCGGTT
CAGCAGGCCGGGCTGGCCCTGGTGGTGGCGGCCAGCCTGGGCGCGCTGGCCGGGAAGCGCTAG

Upstream 100 bases:

>100_bases
AGGTTGCGTGGCGAATTCGTCACCTATTGACGCCGCCACGGACATGACCGGGAGGGGGCGCAGCCGCGCCTGGTCGGGCG
CGGCGCTGGCGCTGGCATCG

Downstream 100 bases:

>100_bases
CTGCCCGCGGCCGCCGTCAATGCGGCATGCCGGCGTAGCGCTCGCCCAATCGTTGAATGGCGGCGATCAATTCGCGCTCC
ACATGCTGGTCGCGGATGAT

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MCCAQFGAALSQPAAQSLGVFRATALKLAFAAAFLWLWRRPPLRRALRGEPVLLGLGLAMAGLLLGFFAALRTLPQGLTV
AITLLGPLALAWGKDRRRWPWPMLALVGTVLLARREERWLIDVAGLAWAGLSAACWAVYIVLLRRAGEVCRDGDGVALAL
LVAALAAAPWIWLDGGAWPDASMLLRLAGLSLLMPALPCLLELEALRRMPAASFGVLMSLEPALAVSAGGLLLGQTPAAV
QQAGLALVVAASLGALAGKR

Sequences:

>Translated_260_residues
MCCAQFGAALSQPAAQSLGVFRATALKLAFAAAFLWLWRRPPLRRALRGEPVLLGLGLAMAGLLLGFFAALRTLPQGLTV
AITLLGPLALAWGKDRRRWPWPMLALVGTVLLARREERWLIDVAGLAWAGLSAACWAVYIVLLRRAGEVCRDGDGVALAL
LVAALAAAPWIWLDGGAWPDASMLLRLAGLSLLMPALPCLLELEALRRMPAASFGVLMSLEPALAVSAGGLLLGQTPAAV
QQAGLALVVAASLGALAGKR
>Mature_260_residues
MCCAQFGAALSQPAAQSLGVFRATALKLAFAAAFLWLWRRPPLRRALRGEPVLLGLGLAMAGLLLGFFAALRTLPQGLTV
AITLLGPLALAWGKDRRRWPWPMLALVGTVLLARREERWLIDVAGLAWAGLSAACWAVYIVLLRRAGEVCRDGDGVALAL
LVAALAAAPWIWLDGGAWPDASMLLRLAGLSLLMPALPCLLELEALRRMPAASFGVLMSLEPALAVSAGGLLLGQTPAAV
QQAGLALVVAASLGALAGKR

Specific function: Unknown

COG id: COG5006

COG function: function code R; Predicted permease, DMT superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1787033, Length=262, Percent_Identity=36.6412213740458, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 27280; Mature: 27280

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCCAQFGAALSQPAAQSLGVFRATALKLAFAAAFLWLWRRPPLRRALRGEPVLLGLGLAM
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEHHHHHH
AGLLLGFFAALRTLPQGLTVAITLLGPLALAWGKDRRRWPWPMLALVGTVLLARREERWL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHE
IDVAGLAWAGLSAACWAVYIVLLRRAGEVCRDGDGVALALLVAALAAAPWIWLDGGAWPD
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCCCC
ASMLLRLAGLSLLMPALPCLLELEALRRMPAASFGVLMSLEPALAVSAGGLLLGQTPAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCCCEEECCCHHHH
QQAGLALVVAASLGALAGKR
HHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MCCAQFGAALSQPAAQSLGVFRATALKLAFAAAFLWLWRRPPLRRALRGEPVLLGLGLAM
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEHHHHHH
AGLLLGFFAALRTLPQGLTVAITLLGPLALAWGKDRRRWPWPMLALVGTVLLARREERWL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHE
IDVAGLAWAGLSAACWAVYIVLLRRAGEVCRDGDGVALALLVAALAAAPWIWLDGGAWPD
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCCCC
ASMLLRLAGLSLLMPALPCLLELEALRRMPAASFGVLMSLEPALAVSAGGLLLGQTPAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCCCEEECCCHHHH
QQAGLALVVAASLGALAGKR
HHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]