| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497180
Identifier: 34497180
GI number: 34497180
Start: 1866090
End: 1867301
Strand: Direct
Name: 34497180
Synonym: CV_1725
Alternate gene names: NA
Gene position: 1866090-1867301 (Clockwise)
Preceding gene: 34497178
Following gene: 34497181
Centisome position: 39.28
GC content: 70.05
Gene sequence:
>1212_bases ATGGCGGGCCTGGAGACCGGGGGGCATCTGCGCGAGCGGCTGGACGGAGCGCGCATCCGGCCGCGTGGCTGGTTGCTGGC CAGCGATGTGGAAGGCCCGATGTTTCTGGGCGATTTCATCGCCGAGGCCTTGGCCGCCTGCCTGAAGCCCGTCGAGGGCG CGGTGGACGCTACGCCGTCCTATGGCCAGATTATTTACGCCGAAGGCTATGCCGCCTTCAGCGCCGACAACGGCGCCTTG CGGCGGCCGGAAGGCAAGAGGGGCGGCAAGACGCCGCCGGTAGGCGGCTACACGCTGGCGCAGGAGGGCAGCGACACCAT CTTCGCCTTGCCGCTGCTGCTGGCCGCCGGCGTCGATCATCTCTACCTGGAGCGCTTGGCGCTGCGTTCGCAGCAGACGC CCGGCGCGGCTGAAATGGCGCGGCGGCTGGACGAAATGGGTTGGCAGCGGGCGGGCATCACCACGGCGCCGCAACAGCCG TACCGGGCGGTGGCCGAGCGTTGCGGCTGGCTGGCGGCGGAACGGCTGCTGGGATCTCCATTTCCGTTGGCGGAGGCGGA AGCCCTGCTGCGCCGGCTTGGCCGTTGGGAAATGGAAATCGGCTGGGTGAGGACGTATTTGCGCGACGCTTACGAGCTGA TAGACCGGCATTCCGAGGCATGGCTGGATGGATCGGTTCGGCGGCGGCATTTCTCCGACACCGGCCGCAAGCTGCTGCGG CAGCGTTTCCGCCTTCTTTACCGCGGGGAGCTCGGCATTTCCTATTCCCGCGGCGAGCGGGCGGGCCGATCGGCCGCTTC TGCGCTGGGCCGCGTCATTGAGGCCTGCGCCATGGTGGGCGATCGCGCCAAGGCCGCGTTGGCGCTGGGCCTGGCGCGCC GCGCGGGAGGACTGGACAGGCTGGTGACGATGGGTGACGGCGCCAACGACGCGGCGATGCTGCGCCGCGCCCGCTGGTCG ATAGGGGTCAACGGGCCGGACGCGGCGCGGGCGGCGGCCATAGGCCTGGTGACCGACGATATGCGGCATGCGCTGGTGCT GCTCAGGCTGATCGAGCGGGGCGGCGACGTCGGCGAGGTGGTCGGCCGCGCGCAGGCCGAACTGCGCGGCGCGGCGCTGG TGCATCGCGGCGGCGACGGGCTGTCGGCGGAATTGGCGGAAAAGCACAGGCTGATGAAGCGGAGGTTGCGTGGCGAATTC GTCACCTATTGA
Upstream 100 bases:
>100_bases TGAGATTAAGGACAAACCGCAATGTGTTGCCGCCTTGGGACAGCCTCCCTATACCGTAAGCATCGTGGGAACGGCGGAGC GAGAGATGGAGCGGGGGGAC
Downstream 100 bases:
>100_bases CGCCGCCACGGACATGACCGGGAGGGGGCGCAGCCGCGCCTGGTCGGGCGCGGCGCTGGCGCTGGCATCGATGTGCTGCG CGCAGTTCGGCGCGGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MAGLETGGHLRERLDGARIRPRGWLLASDVEGPMFLGDFIAEALAACLKPVEGAVDATPSYGQIIYAEGYAAFSADNGAL RRPEGKRGGKTPPVGGYTLAQEGSDTIFALPLLLAAGVDHLYLERLALRSQQTPGAAEMARRLDEMGWQRAGITTAPQQP YRAVAERCGWLAAERLLGSPFPLAEAEALLRRLGRWEMEIGWVRTYLRDAYELIDRHSEAWLDGSVRRRHFSDTGRKLLR QRFRLLYRGELGISYSRGERAGRSAASALGRVIEACAMVGDRAKAALALGLARRAGGLDRLVTMGDGANDAAMLRRARWS IGVNGPDAARAAAIGLVTDDMRHALVLLRLIERGGDVGEVVGRAQAELRGAALVHRGGDGLSAELAEKHRLMKRRLRGEF VTY
Sequences:
>Translated_403_residues MAGLETGGHLRERLDGARIRPRGWLLASDVEGPMFLGDFIAEALAACLKPVEGAVDATPSYGQIIYAEGYAAFSADNGAL RRPEGKRGGKTPPVGGYTLAQEGSDTIFALPLLLAAGVDHLYLERLALRSQQTPGAAEMARRLDEMGWQRAGITTAPQQP YRAVAERCGWLAAERLLGSPFPLAEAEALLRRLGRWEMEIGWVRTYLRDAYELIDRHSEAWLDGSVRRRHFSDTGRKLLR QRFRLLYRGELGISYSRGERAGRSAASALGRVIEACAMVGDRAKAALALGLARRAGGLDRLVTMGDGANDAAMLRRARWS IGVNGPDAARAAAIGLVTDDMRHALVLLRLIERGGDVGEVVGRAQAELRGAALVHRGGDGLSAELAEKHRLMKRRLRGEF VTY >Mature_402_residues AGLETGGHLRERLDGARIRPRGWLLASDVEGPMFLGDFIAEALAACLKPVEGAVDATPSYGQIIYAEGYAAFSADNGALR RPEGKRGGKTPPVGGYTLAQEGSDTIFALPLLLAAGVDHLYLERLALRSQQTPGAAEMARRLDEMGWQRAGITTAPQQPY RAVAERCGWLAAERLLGSPFPLAEAEALLRRLGRWEMEIGWVRTYLRDAYELIDRHSEAWLDGSVRRRHFSDTGRKLLRQ RFRLLYRGELGISYSRGERAGRSAASALGRVIEACAMVGDRAKAALALGLARRAGGLDRLVTMGDGANDAAMLRRARWSI GVNGPDAARAAAIGLVTDDMRHALVLLRLIERGGDVGEVVGRAQAELRGAALVHRGGDGLSAELAEKHRLMKRRLRGEFV TY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43830; Mature: 43699
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLETGGHLRERLDGARIRPRGWLLASDVEGPMFLGDFIAEALAACLKPVEGAVDATPS CCCCCCCHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC YGQIIYAEGYAAFSADNGALRRPEGKRGGKTPPVGGYTLAQEGSDTIFALPLLLAAGVDH CCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCHHH LYLERLALRSQQTPGAAEMARRLDEMGWQRAGITTAPQQPYRAVAERCGWLAAERLLGSP HHHHHHHHHCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC FPLAEAEALLRRLGRWEMEIGWVRTYLRDAYELIDRHSEAWLDGSVRRRHFSDTGRKLLR CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QRFRLLYRGELGISYSRGERAGRSAASALGRVIEACAMVGDRAKAALALGLARRAGGLDR HHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LVTMGDGANDAAMLRRARWSIGVNGPDAARAAAIGLVTDDMRHALVLLRLIERGGDVGEV EEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VGRAQAELRGAALVHRGGDGLSAELAEKHRLMKRRLRGEFVTY HHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AGLETGGHLRERLDGARIRPRGWLLASDVEGPMFLGDFIAEALAACLKPVEGAVDATPS CCCCCCHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC YGQIIYAEGYAAFSADNGALRRPEGKRGGKTPPVGGYTLAQEGSDTIFALPLLLAAGVDH CCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCHHH LYLERLALRSQQTPGAAEMARRLDEMGWQRAGITTAPQQPYRAVAERCGWLAAERLLGSP HHHHHHHHHCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC FPLAEAEALLRRLGRWEMEIGWVRTYLRDAYELIDRHSEAWLDGSVRRRHFSDTGRKLLR CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QRFRLLYRGELGISYSRGERAGRSAASALGRVIEACAMVGDRAKAALALGLARRAGGLDR HHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LVTMGDGANDAAMLRRARWSIGVNGPDAARAAAIGLVTDDMRHALVLLRLIERGGDVGEV EEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VGRAQAELRGAALVHRGGDGLSAELAEKHRLMKRRLRGEFVTY HHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA