| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is flgG [H]
Identifier: 34497161
GI number: 34497161
Start: 1844384
End: 1845172
Strand: Direct
Name: flgG [H]
Synonym: CV_1706
Alternate gene names: 34497161
Gene position: 1844384-1845172 (Clockwise)
Preceding gene: 34497160
Following gene: 34497162
Centisome position: 38.82
GC content: 65.15
Gene sequence:
>789_bases ATGAATCCGGCACTTTGGATCAGCAAGACCGGCATACAGGCGCAGGACGCGCGCCTGACCGCCATCGCCAACAACCTGGC CAACGTCAACACCACCGGCTTCAAGCGCGACCGCATGATATTCGAAGACCTGTTCTACCAGGTCGAGAAGCAGCCCGGCA GCAAGGTGGACGACAACAACGTGTCGCCGTCCGGCGTGCAGATGGGCAACGGCACCCGGCTGGTGGGCAGCCAGAAGGTG TTCACCGAGGGCAACATCACCACCACCAACCAGAGCCTGGACGTGGCCATCATCGGCCAGGGCTTCCTGCAGGTGAAGAT GGCCAACGGCGAGACCGGCTACACCCGGGCGGGGCAGCTGAGCCTGAGCAAGGACGGCGTGCTGCAGACCGCCCAGGGCC TGCCGCTGGAGCCCGAGATCCGCATCCCGGCCGACGCCACCAAGATTTCGATCAGCGAAACCGGCGAGGTCGCCGTGACC CGCGGCAGCGGCACCACGCCGGAAGCGGTGGACCGCATCCAGCTGGCCAGCTTCATCAATCCGGCCGGCCTGCTGGCGCT GGGCGACAATCTGTTCCAGAAAACCGACGCCAGCGGCGACGCCAACCCAGGCGATCCCGGCAACGGCGCGCTGGGCAAGC TGAAGCAGGGCAGCCTGGAAGGCTCCAATGTGCAGGTGGTGGAAGAGATGGTGGACATGATCGCCGCCCAGCGCACCTAC GAGATGAACACCAAGGTGCTGTCCGCCGCCGACAATATGCTGCAGCAACTGGGCCAGTCGGTACGATGA
Upstream 100 bases:
>100_bases TTTCGAGATGCAGATGAAACTGTTCAACGCCGCCAGCGACATGAACGAGGCGGGCAACCGCCTGGTGCGCGGCTGAACGG CCGACTGATTGGGAGATACG
Downstream 100 bases:
>100_bases CGCTTGCCCGCCTCGCGCCGCTGGCCGCCTTGCTGCTGGCGGCCTGCGCCCAGTTCCAGCCGCCTCCGCCGGAGCCGGAT CCGCTGCCCGACCTGATGCG
Product: flagellar basal body rod protein FlgG
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MNPALWISKTGIQAQDARLTAIANNLANVNTTGFKRDRMIFEDLFYQVEKQPGSKVDDNNVSPSGVQMGNGTRLVGSQKV FTEGNITTTNQSLDVAIIGQGFLQVKMANGETGYTRAGQLSLSKDGVLQTAQGLPLEPEIRIPADATKISISETGEVAVT RGSGTTPEAVDRIQLASFINPAGLLALGDNLFQKTDASGDANPGDPGNGALGKLKQGSLEGSNVQVVEEMVDMIAAQRTY EMNTKVLSAADNMLQQLGQSVR
Sequences:
>Translated_262_residues MNPALWISKTGIQAQDARLTAIANNLANVNTTGFKRDRMIFEDLFYQVEKQPGSKVDDNNVSPSGVQMGNGTRLVGSQKV FTEGNITTTNQSLDVAIIGQGFLQVKMANGETGYTRAGQLSLSKDGVLQTAQGLPLEPEIRIPADATKISISETGEVAVT RGSGTTPEAVDRIQLASFINPAGLLALGDNLFQKTDASGDANPGDPGNGALGKLKQGSLEGSNVQVVEEMVDMIAAQRTY EMNTKVLSAADNMLQQLGQSVR >Mature_262_residues MNPALWISKTGIQAQDARLTAIANNLANVNTTGFKRDRMIFEDLFYQVEKQPGSKVDDNNVSPSGVQMGNGTRLVGSQKV FTEGNITTTNQSLDVAIIGQGFLQVKMANGETGYTRAGQLSLSKDGVLQTAQGLPLEPEIRIPADATKISISETGEVAVT RGSGTTPEAVDRIQLASFINPAGLLALGDNLFQKTDASGDANPGDPGNGALGKLKQGSLEGSNVQVVEEMVDMIAAQRTY EMNTKVLSAADNMLQQLGQSVR
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=259, Percent_Identity=46.3320463320463, Blast_Score=239, Evalue=9e-65, Organism=Escherichia coli, GI1787316, Length=115, Percent_Identity=38.2608695652174, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787317, Length=187, Percent_Identity=32.620320855615, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 - InterPro: IPR012834 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 27743; Mature: 27743
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPALWISKTGIQAQDARLTAIANNLANVNTTGFKRDRMIFEDLFYQVEKQPGSKVDDNN CCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC VSPSGVQMGNGTRLVGSQKVFTEGNITTTNQSLDVAIIGQGFLQVKMANGETGYTRAGQL CCCCCEEECCCEEEECCCEEEECCCEEECCCCEEEEEEECCEEEEEEECCCCCCCCCCEE SLSKDGVLQTAQGLPLEPEIRIPADATKISISETGEVAVTRGSGTTPEAVDRIQLASFIN ECCCCCCHHHCCCCCCCCCEECCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCC PAGLLALGDNLFQKTDASGDANPGDPGNGALGKLKQGSLEGSNVQVVEEMVDMIAAQRTY CCHHEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH EMNTKVLSAADNMLQQLGQSVR HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNPALWISKTGIQAQDARLTAIANNLANVNTTGFKRDRMIFEDLFYQVEKQPGSKVDDNN CCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC VSPSGVQMGNGTRLVGSQKVFTEGNITTTNQSLDVAIIGQGFLQVKMANGETGYTRAGQL CCCCCEEECCCEEEECCCEEEECCCEEECCCCEEEEEEECCEEEEEEECCCCCCCCCCEE SLSKDGVLQTAQGLPLEPEIRIPADATKISISETGEVAVTRGSGTTPEAVDRIQLASFIN ECCCCCCHHHCCCCCCCCCEECCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCC PAGLLALGDNLFQKTDASGDANPGDPGNGALGKLKQGSLEGSNVQVVEEMVDMIAAQRTY CCHHEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH EMNTKVLSAADNMLQQLGQSVR HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12522265 [H]