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The map label for this gene is flgH

Identifier: 34497162

GI number: 34497162

Start: 1845169

End: 1845822

Strand: Direct

Name: flgH

Synonym: CV_1707

Alternate gene names: 34497162

Gene position: 1845169-1845822 (Clockwise)

Preceding gene: 34497161

Following gene: 34497163

Centisome position: 38.84

GC content: 69.57

Gene sequence:

>654_bases
ATGACGCTTGCCCGCCTCGCGCCGCTGGCCGCCTTGCTGCTGGCGGCCTGCGCCCAGTTCCAGCCGCCTCCGCCGGAGCC
GGATCCGCTGCCCGACCTGATGCGCCAGCAAACTTCGCTGCCGCAGGGCGGCGGCGTGTTCACCGCCGGCGGCTCGCTGT
CGCTGACTTCGGACAACCGCGCCTTCCGCCCCGGCGACGTGCTGACCGTGGTGCTGGAGGAGACCACCCAGGCCAGCAAG
CAGGCCGGCACCAGCTTCGGCAAGAAGTCCGGCGCCAAGATCGGCCCTTCGCTGATCGGCAACACCACTTTCAACGCCCA
GGTCGGCATCGACGCCAACCGCGACTTCAACGGCTCGTCCAGCTCCACCCAGCAGAACGCGCTGGCCGGCTCGCTGACCG
TAGTGGTGCACCGGGTGCTGCCCAACGGCCTGCTGCAGGTCAAGGGCGAGAAGCAGCTGACGCTGAACCAGGGCGAGGAG
ATGCTGCGCGTGGCGGGCTACGTGCGGGTGGAGGACATCGACACCGACAACCGCGTGTCCTCGCTGCGCATCGCCAACGC
CCGCATCGGCTATTCCGGCAGCGGCGCGCTGGCCGACGCCAACAGCCCGGGCTGGCTGATGCGCTTCTTCGCCAGTCCCT
TGATGCCGTTCTAG

Upstream 100 bases:

>100_bases
AGATGGTGGACATGATCGCCGCCCAGCGCACCTACGAGATGAACACCAAGGTGCTGTCCGCCGCCGACAATATGCTGCAG
CAACTGGGCCAGTCGGTACG

Downstream 100 bases:

>100_bases
GGTTCGCAATGATATTCAAACAGATTCGACGCCTGATCGCCGCCGCCTTGCTGGCGGCGTTGTCGCTGCCGGCCGCGGCC
CAGCCGCTGCGGCAGCTGGT

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein 1

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MTLARLAPLAALLLAACAQFQPPPPEPDPLPDLMRQQTSLPQGGGVFTAGGSLSLTSDNRAFRPGDVLTVVLEETTQASK
QAGTSFGKKSGAKIGPSLIGNTTFNAQVGIDANRDFNGSSSSTQQNALAGSLTVVVHRVLPNGLLQVKGEKQLTLNQGEE
MLRVAGYVRVEDIDTDNRVSSLRIANARIGYSGSGALADANSPGWLMRFFASPLMPF

Sequences:

>Translated_217_residues
MTLARLAPLAALLLAACAQFQPPPPEPDPLPDLMRQQTSLPQGGGVFTAGGSLSLTSDNRAFRPGDVLTVVLEETTQASK
QAGTSFGKKSGAKIGPSLIGNTTFNAQVGIDANRDFNGSSSSTQQNALAGSLTVVVHRVLPNGLLQVKGEKQLTLNQGEE
MLRVAGYVRVEDIDTDNRVSSLRIANARIGYSGSGALADANSPGWLMRFFASPLMPF
>Mature_216_residues
TLARLAPLAALLLAACAQFQPPPPEPDPLPDLMRQQTSLPQGGGVFTAGGSLSLTSDNRAFRPGDVLTVVLEETTQASKQ
AGTSFGKKSGAKIGPSLIGNTTFNAQVGIDANRDFNGSSSSTQQNALAGSLTVVVHRVLPNGLLQVKGEKQLTLNQGEEM
LRVAGYVRVEDIDTDNRVSSLRIANARIGYSGSGALADANSPGWLMRFFASPLMPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family

Homologues:

Organism=Escherichia coli, GI1787319, Length=218, Percent_Identity=34.4036697247706, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGH1_CHRVO (Q7NXC0)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_901377.1
- GeneID:   2551237
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_1707
- NMPDR:   fig|243365.1.peg.1707
- HOGENOM:   HBG507455
- OMA:   CESQAIL
- PhylomeDB:   Q7NXC0
- ProtClustDB:   PRK00249
- BioCyc:   CVIO243365:CV_1707-MONOMER
- HAMAP:   MF_00415
- InterPro:   IPR000527
- PRINTS:   PR01008

Pfam domain/function: PF02107 FlgH

EC number: NA

Molecular weight: Translated: 22796; Mature: 22665

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN ; PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLARLAPLAALLLAACAQFQPPPPEPDPLPDLMRQQTSLPQGGGVFTAGGSLSLTSDNR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCEEEEECCCC
AFRPGDVLTVVLEETTQASKQAGTSFGKKSGAKIGPSLIGNTTFNAQVGIDANRDFNGSS
CCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCCCC
SSTQQNALAGSLTVVVHRVLPNGLLQVKGEKQLTLNQGEEMLRVAGYVRVEDIDTDNRVS
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEHHCCHHHHHHHCEEEEEECCCCCCHH
SLRIANARIGYSGSGALADANSPGWLMRFFASPLMPF
EEEEECEEECCCCCCCEECCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
TLARLAPLAALLLAACAQFQPPPPEPDPLPDLMRQQTSLPQGGGVFTAGGSLSLTSDNR
CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCEEEEECCCC
AFRPGDVLTVVLEETTQASKQAGTSFGKKSGAKIGPSLIGNTTFNAQVGIDANRDFNGSS
CCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCCCC
SSTQQNALAGSLTVVVHRVLPNGLLQVKGEKQLTLNQGEEMLRVAGYVRVEDIDTDNRVS
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEHHCCHHHHHHHCEEEEEECCCCCCHH
SLRIANARIGYSGSGALADANSPGWLMRFFASPLMPF
EEEEECEEECCCCCCCEECCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14500782