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The map label for this gene is bdlA [H]

Identifier: 34497153

GI number: 34497153

Start: 1835852

End: 1837177

Strand: Reverse

Name: bdlA [H]

Synonym: CV_1698

Alternate gene names: 34497153

Gene position: 1837177-1835852 (Counterclockwise)

Preceding gene: 34497154

Following gene: 34497143

Centisome position: 38.67

GC content: 64.56

Gene sequence:

>1326_bases
ATGGTCTTTTTCACCCGCAAGCTCGCCGCCGAACTGGAACACGCCAATCAGCAACTTCGCCAGTCGCGCAGCCTGCTTGC
CGCCATCGAGCGCTCGATGGCGGTGATAGAGTTTTCCGTCGACGGCAAAATCGTCCACGCCAACGACAATTTCCTGCGCG
CCATGGGCTACAGTGCCGATGAAATCCGGGACAAGCACCACCGCATGTTCTGCCAGGACGACTACGCCAACAGCCCCGCC
TACCGCGACTTCTGGCAAAAGCTGGCGCGCGGCGAATTCCAAGCCGGCCATTTCCTCCGGCGCCGCAAGGATGGATCGGA
CATCTGGCTGGAAGCCAGCTACTCGCCGATATTGGACGGCGACGGGCGCGTGACCGGCGTGATCAAGGTCGCCACCGACA
TCACCCAGCAGGTTCGCGACGAAGAGGACAGCAGGGCGCTGCGCCAGGCGATAGACCACTCGATGGCCCGCATCGAGTTC
GACCTGGACGGCAACATCCTCGACGCCAACGACAACTTCCTGAAAGTGTTCGGCTATCGGCGCGCCGACGTGATAGGCAA
GCACCACCGCATGCTGTGCGAGCCCAGCTACGCCCAGGGCCCGGAGTACGGCCAGCTGTGGCAGCAACTCAGACAGGGGC
GCTTCCTGGAGGGGCAGTTCCGCCGCATGAACAGCCATGGCGAGGTGATCTGGCTGCAGGCCACCTACAACCCGGTGCTG
GATCCGCAAGGCCGACCGGTGCGGGTGGTGAAGTTCGCCAGCGACATCAGCGAGCAAATGCTGAAACTGAGGCAGCAGGC
GGAAAACGCCCGTTCGGCGGTGCATGCGTCGGAGAGCACCGAGCAGCTGTCGATACAGGGCAGCTCGGTGCTGGAGCAGG
CCACCACCGAGATCAACCGCGTCGCGGGCAGCGTGGAAACCTCGTCCGGCATCCTGTCCAAGCTGGGCGACAGCTCCGAC
CAGATCGGCAGCATCGTCAACACCATCAGCGACATCGCCGACCAGACCAATCTCTTGGCGCTGAACGCGGCGATCGAGGC
CGCGCGGGCCGGCGAGATGGGCCGCGGCTTCGCCGTGGTGGCGGACGAAGTGAGAAAGCTGGCCGAGCGCACCAGTCAGT
CCACCGGCGAGATCTCCGGCATCGTCAAGAGCATCCAGGACGATTCCCGCTCCGCGATCGAGGCGATGCGGCAGATGCAG
GCGCTGGCCGGCAATAGCCTGCAGCTGGCGGACCAGGCGCGCGACGCAATCCAGGAAATCCGCAGCGGCGCGCGCGACGT
GGTGCTGGTGGTGAAAGAAGTCTCGGAGCTGCTGCAGCAGAGCTGA

Upstream 100 bases:

>100_bases
GAATCACGAAGCATGCATTAACCTTCAAAATGGAAGCGCGTCCCACCCTTCCTGCCTCCCCCATCGCAACACCGCAACAG
CACAGCGCCGGAGATTCACC

Downstream 100 bases:

>100_bases
ACCGCCCAGCCGCAAAAAAAAACGGACCGCATGATCGCGGCCCGTTTTTCATTTCTCCCGTCCATGGCGCGGACAGAGCG
GCATCAATAGCCGAGGCCCA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MVFFTRKLAAELEHANQQLRQSRSLLAAIERSMAVIEFSVDGKIVHANDNFLRAMGYSADEIRDKHHRMFCQDDYANSPA
YRDFWQKLARGEFQAGHFLRRRKDGSDIWLEASYSPILDGDGRVTGVIKVATDITQQVRDEEDSRALRQAIDHSMARIEF
DLDGNILDANDNFLKVFGYRRADVIGKHHRMLCEPSYAQGPEYGQLWQQLRQGRFLEGQFRRMNSHGEVIWLQATYNPVL
DPQGRPVRVVKFASDISEQMLKLRQQAENARSAVHASESTEQLSIQGSSVLEQATTEINRVAGSVETSSGILSKLGDSSD
QIGSIVNTISDIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRKLAERTSQSTGEISGIVKSIQDDSRSAIEAMRQMQ
ALAGNSLQLADQARDAIQEIRSGARDVVLVVKEVSELLQQS

Sequences:

>Translated_441_residues
MVFFTRKLAAELEHANQQLRQSRSLLAAIERSMAVIEFSVDGKIVHANDNFLRAMGYSADEIRDKHHRMFCQDDYANSPA
YRDFWQKLARGEFQAGHFLRRRKDGSDIWLEASYSPILDGDGRVTGVIKVATDITQQVRDEEDSRALRQAIDHSMARIEF
DLDGNILDANDNFLKVFGYRRADVIGKHHRMLCEPSYAQGPEYGQLWQQLRQGRFLEGQFRRMNSHGEVIWLQATYNPVL
DPQGRPVRVVKFASDISEQMLKLRQQAENARSAVHASESTEQLSIQGSSVLEQATTEINRVAGSVETSSGILSKLGDSSD
QIGSIVNTISDIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRKLAERTSQSTGEISGIVKSIQDDSRSAIEAMRQMQ
ALAGNSLQLADQARDAIQEIRSGARDVVLVVKEVSELLQQS
>Mature_441_residues
MVFFTRKLAAELEHANQQLRQSRSLLAAIERSMAVIEFSVDGKIVHANDNFLRAMGYSADEIRDKHHRMFCQDDYANSPA
YRDFWQKLARGEFQAGHFLRRRKDGSDIWLEASYSPILDGDGRVTGVIKVATDITQQVRDEEDSRALRQAIDHSMARIEF
DLDGNILDANDNFLKVFGYRRADVIGKHHRMLCEPSYAQGPEYGQLWQQLRQGRFLEGQFRRMNSHGEVIWLQATYNPVL
DPQGRPVRVVKFASDISEQMLKLRQQAENARSAVHASESTEQLSIQGSSVLEQATTEINRVAGSVETSSGILSKLGDSSD
QIGSIVNTISDIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRKLAERTSQSTGEISGIVKSIQDDSRSAIEAMRQMQ
ALAGNSLQLADQARDAIQEIRSGARDVVLVVKEVSELLQQS

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=200, Percent_Identity=35.5, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI2367378, Length=155, Percent_Identity=38.7096774193548, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1788194, Length=98, Percent_Identity=48.9795918367347, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1787690, Length=118, Percent_Identity=45.7627118644068, Blast_Score=88, Evalue=9e-19,
Organism=Escherichia coli, GI1789453, Length=186, Percent_Identity=31.7204301075269, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 49154; Mature: 49154

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFFTRKLAAELEHANQQLRQSRSLLAAIERSMAVIEFSVDGKIVHANDNFLRAMGYSAD
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEECCCCCHHHCCCCHH
EIRDKHHRMFCQDDYANSPAYRDFWQKLARGEFQAGHFLRRRKDGSDIWLEASYSPILDG
HHHHHHHHCEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCCC
DGRVTGVIKVATDITQQVRDEEDSRALRQAIDHSMARIEFDLDGNILDANDNFLKVFGYR
CCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEECCCCEECCCCCEEEECCCH
RADVIGKHHRMLCEPSYAQGPEYGQLWQQLRQGRFLEGQFRRMNSHGEVIWLQATYNPVL
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCCC
DPQGRPVRVVKFASDISEQMLKLRQQAENARSAVHASESTEQLSIQGSSVLEQATTEINR
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECHHHHHHHHHHHHHH
VAGSVETSSGILSKLGDSSDQIGSIVNTISDIADQTNLLALNAAIEAARAGEMGRGFAVV
HHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHH
ADEVRKLAERTSQSTGEISGIVKSIQDDSRSAIEAMRQMQALAGNSLQLADQARDAIQEI
HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
RSGARDVVLVVKEVSELLQQS
HCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVFFTRKLAAELEHANQQLRQSRSLLAAIERSMAVIEFSVDGKIVHANDNFLRAMGYSAD
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEECCCCCHHHCCCCHH
EIRDKHHRMFCQDDYANSPAYRDFWQKLARGEFQAGHFLRRRKDGSDIWLEASYSPILDG
HHHHHHHHCEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCCC
DGRVTGVIKVATDITQQVRDEEDSRALRQAIDHSMARIEFDLDGNILDANDNFLKVFGYR
CCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEECCCCEECCCCCEEEECCCH
RADVIGKHHRMLCEPSYAQGPEYGQLWQQLRQGRFLEGQFRRMNSHGEVIWLQATYNPVL
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCCC
DPQGRPVRVVKFASDISEQMLKLRQQAENARSAVHASESTEQLSIQGSSVLEQATTEINR
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECHHHHHHHHHHHHHH
VAGSVETSSGILSKLGDSSDQIGSIVNTISDIADQTNLLALNAAIEAARAGEMGRGFAVV
HHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHH
ADEVRKLAERTSQSTGEISGIVKSIQDDSRSAIEAMRQMQALAGNSLQLADQARDAIQEI
HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
RSGARDVVLVVKEVSELLQQS
HCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]