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The map label for this gene is ywhC [H]

Identifier: 34497151

GI number: 34497151

Start: 1833857

End: 1834498

Strand: Direct

Name: ywhC [H]

Synonym: CV_1696

Alternate gene names: 34497151

Gene position: 1833857-1834498 (Clockwise)

Preceding gene: 34497150

Following gene: 34497152

Centisome position: 38.6

GC content: 63.86

Gene sequence:

>642_bases
ATGTTCGACTTCAATCAGCTGGTGCAGCAGGTCACGATTTTCGCCTTGCCGGTATTGCTGGCGATCACCCTGCATGAGGC
GGCGCACGCTTACGCCGCGCGCCGCTTCGGCGACGACACCGCCTATCTGCAGGGGCGGATGACGCTCAATCCCTTCAAGC
ACATCGACCCGATAGGCACGGTGCTCTTGCCCTTGCTGACCATCTGGCTCGGCAGCTTCATCTTTGGCTGGGCCAGGCCG
GTGCCGGTCAATTTCAACGCGCTGCGCAAGCCGCGCCAGCATATGCGCTGGGTGGCGGCGGCCGGGCCGCTGGCCAACCT
GGCGATGATGCTGGGCTGGGCCGTGCTGCTCAAGCTGGCGCTGGGCATGGACGGGGCCTACCGCGACCCGCTGATGCTGA
TGAGCAAGGCGGGCATCAGCATCAATATCTCGCTGATGCTGCTCAACCTGTTGCCGATCCTGCCGCTGGATGGCGGACGC
ATCGTCTACAGCCTGCTGCCGCCGGGCGTCGCCTGGCGCTACGCGCAGACCGAGAGCTGGGGCATGTGGCTGTTGCTGCT
GCTGGTGGCCAGCGGCCTGTTGGGTGCCATCCTGCAGCCCTTGTACGTCTTGATGTATCATCTGCTGCAACTGTTTTTCT
AG

Upstream 100 bases:

>100_bases
TGATCCTGAGCCTGGCGCTGTAGCGGCCGATTGCGGTCGGATTTGCCAAATCCGCGCGGGGCTGTCATGTTCATAGCATG
GCAGTGCGAGGAGGACGGGC

Downstream 100 bases:

>100_bases
AACCCTGAGCGGGCCTGGCCGCCGGATGGTGCCGGCGGCTTTTCATTTCCCGCGCAACCGAGAGCATAACAATATGTCCG
CCAACCGCATTCTCTCCGGC

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MFDFNQLVQQVTIFALPVLLAITLHEAAHAYAARRFGDDTAYLQGRMTLNPFKHIDPIGTVLLPLLTIWLGSFIFGWARP
VPVNFNALRKPRQHMRWVAAAGPLANLAMMLGWAVLLKLALGMDGAYRDPLMLMSKAGISINISLMLLNLLPILPLDGGR
IVYSLLPPGVAWRYAQTESWGMWLLLLLVASGLLGAILQPLYVLMYHLLQLFF

Sequences:

>Translated_213_residues
MFDFNQLVQQVTIFALPVLLAITLHEAAHAYAARRFGDDTAYLQGRMTLNPFKHIDPIGTVLLPLLTIWLGSFIFGWARP
VPVNFNALRKPRQHMRWVAAAGPLANLAMMLGWAVLLKLALGMDGAYRDPLMLMSKAGISINISLMLLNLLPILPLDGGR
IVYSLLPPGVAWRYAQTESWGMWLLLLLVASGLLGAILQPLYVLMYHLLQLFF
>Mature_213_residues
MFDFNQLVQQVTIFALPVLLAITLHEAAHAYAARRFGDDTAYLQGRMTLNPFKHIDPIGTVLLPLLTIWLGSFIFGWARP
VPVNFNALRKPRQHMRWVAAAGPLANLAMMLGWAVLLKLALGMDGAYRDPLMLMSKAGISINISLMLLNLLPILPLDGGR
IVYSLLPPGVAWRYAQTESWGMWLLLLLVASGLLGAILQPLYVLMYHLLQLFF

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 23778; Mature: 23778

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDFNQLVQQVTIFALPVLLAITLHEAAHAYAARRFGDDTAYLQGRMTLNPFKHIDPIGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEECCHHHCCHHHH
VLLPLLTIWLGSFIFGWARPVPVNFNALRKPRQHMRWVAAAGPLANLAMMLGWAVLLKLA
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LGMDGAYRDPLMLMSKAGISINISLMLLNLLPILPLDGGRIVYSLLPPGVAWRYAQTESW
HCCCCCCCCHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCH
GMWLLLLLVASGLLGAILQPLYVLMYHLLQLFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MFDFNQLVQQVTIFALPVLLAITLHEAAHAYAARRFGDDTAYLQGRMTLNPFKHIDPIGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEECCHHHCCHHHH
VLLPLLTIWLGSFIFGWARPVPVNFNALRKPRQHMRWVAAAGPLANLAMMLGWAVLLKLA
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LGMDGAYRDPLMLMSKAGISINISLMLLNLLPILPLDGGRIVYSLLPPGVAWRYAQTESW
HCCCCCCCCHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCH
GMWLLLLLVASGLLGAILQPLYVLMYHLLQLFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]