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The map label for this gene is hcnC [H]

Identifier: 34497137

GI number: 34497137

Start: 1823862

End: 1825121

Strand: Reverse

Name: hcnC [H]

Synonym: CV_1682

Alternate gene names: 34497137

Gene position: 1825121-1823862 (Counterclockwise)

Preceding gene: 34497138

Following gene: 34497136

Centisome position: 38.41

GC content: 67.06

Gene sequence:

>1260_bases
ATGAGCAAGCAATACGACATCGTGATCGCCGGCGGCGGCGTGATCGGCGCCTCCTGCGCCTACCAGCTGTCCAAGCGCCG
CGATCTGAAAATCGCGCTGATCGACAGCAAGCGTCCCGGCAACGCGTCGCGCGCGTCGGCCGGCGGCCTGTGGGCGATAG
GCGAGTCGGTGGGCCTGGGCTGCGGCGTGATCTTCTTCCGCATGACCTCGGCCAAGCGCAAGCGCGAGGCGGCCGGCGCG
GCGGTGGCGGTGGACGCCAGCACGCCGCACATCCTGCCGCAGAGCTTCTTCGACTTCGCGCTGGCCTCCAACGCGCTGTA
CCCGGCCCTGCACCAGGAACTGATGGAAAACCACGGCATGGACTTCAAGTTCGAGCGCACCGGGCTCAAGTACATCATTT
ACGATGAAGAAGACCAGCTGTACGCCGAGCACATCGCCGCCCAGATTCCGCACCTGGCCAGCGAGGTGAGCTGGCTGGAC
CGCGCCCAGCTGCGCGAGAGCGAGCCCTATGTCAGCGGCGAGGCGCAAGGCGCGCTGGAATTCCTGTGCGACCATCAGGT
CAGCCCGTTCCGCCTGACCGACGCCTACACCGAGGCGGCGCGGCAAAACGGCGTCGACGTGTTCTTCAACGTCAACGTCA
CCGGCGTCACCCGCCAGGGCAGCCGCGTGACCGGCGTGCGCACCGCCGAGGCCGGCGATTTCTCTTGCAATACGCTGATC
AACGCCGGCGGCTCCTGGGCGGCCGAGCTGTCGCGCTGGGCCACCGGCCGCACCATCCCGGTCAAGCCGGTCAAGGGCCA
GATCGTGCTGTCGGAGAAGATGCCCAAGCTCTTGCGCGGCTGCATCACCACCAGCGACTGCTACATCGCGCAGAAGGACA
ACGGCGAGATCCTGATCGGCAGCACCACCGAGGACAAGGGCTACGACACCGCCATCACCTATCCGGAAATCAACGGACTG
GTGCAGGGCGCGATACGCTGCGTGCCGGAGCTCGCCAACGTCAACATCAAGCGTTGCTGGGCAGGCCTGCGCCCCGGCAC
GCCCGACGAGCTGCCTATCCTGGGGCCGGAAGACGGCGTCGAGGGGTATCTGAACGCCTGCGGCCACTTCCGCACCGGCA
TCCTCACCTCGGCCATCACCGGGGTGCTGCTGAACGGGCTGGTGCGCGGCGAGCCGCTGCCGCTGGACATCGCGCCCTTC
CTGGCCGGCCGCTTCCCTAACCGCACCGAAAAAGAAATGGATTTCGCGCTGCACGCCTGA

Upstream 100 bases:

>100_bases
AAGCGCGACGTGGGCTGGATACGCCCGCGCTTCCCGCTGGACCCGCTGCCGTTCTCGGCCTTCTCCGCCATCGACGCCCA
ACAGACTGAAGAGATTTGAC

Downstream 100 bases:

>100_bases
TCAAGTTCCTCTCACTGAGCCGCCACGGCCTGATGGCCTGGCGGTTTTTTTTCGCGCATCGGCCCGACATCCGCCGATGA
AACCGTTTTGTCATATTAAT

Product: hydrogen cyanide synthase HcnC

Products: NA

Alternate protein names: GO [H]

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSKQYDIVIAGGGVIGASCAYQLSKRRDLKIALIDSKRPGNASRASAGGLWAIGESVGLGCGVIFFRMTSAKRKREAAGA
AVAVDASTPHILPQSFFDFALASNALYPALHQELMENHGMDFKFERTGLKYIIYDEEDQLYAEHIAAQIPHLASEVSWLD
RAQLRESEPYVSGEAQGALEFLCDHQVSPFRLTDAYTEAARQNGVDVFFNVNVTGVTRQGSRVTGVRTAEAGDFSCNTLI
NAGGSWAAELSRWATGRTIPVKPVKGQIVLSEKMPKLLRGCITTSDCYIAQKDNGEILIGSTTEDKGYDTAITYPEINGL
VQGAIRCVPELANVNIKRCWAGLRPGTPDELPILGPEDGVEGYLNACGHFRTGILTSAITGVLLNGLVRGEPLPLDIAPF
LAGRFPNRTEKEMDFALHA

Sequences:

>Translated_419_residues
MSKQYDIVIAGGGVIGASCAYQLSKRRDLKIALIDSKRPGNASRASAGGLWAIGESVGLGCGVIFFRMTSAKRKREAAGA
AVAVDASTPHILPQSFFDFALASNALYPALHQELMENHGMDFKFERTGLKYIIYDEEDQLYAEHIAAQIPHLASEVSWLD
RAQLRESEPYVSGEAQGALEFLCDHQVSPFRLTDAYTEAARQNGVDVFFNVNVTGVTRQGSRVTGVRTAEAGDFSCNTLI
NAGGSWAAELSRWATGRTIPVKPVKGQIVLSEKMPKLLRGCITTSDCYIAQKDNGEILIGSTTEDKGYDTAITYPEINGL
VQGAIRCVPELANVNIKRCWAGLRPGTPDELPILGPEDGVEGYLNACGHFRTGILTSAITGVLLNGLVRGEPLPLDIAPF
LAGRFPNRTEKEMDFALHA
>Mature_418_residues
SKQYDIVIAGGGVIGASCAYQLSKRRDLKIALIDSKRPGNASRASAGGLWAIGESVGLGCGVIFFRMTSAKRKREAAGAA
VAVDASTPHILPQSFFDFALASNALYPALHQELMENHGMDFKFERTGLKYIIYDEEDQLYAEHIAAQIPHLASEVSWLDR
AQLRESEPYVSGEAQGALEFLCDHQVSPFRLTDAYTEAARQNGVDVFFNVNVTGVTRQGSRVTGVRTAEAGDFSCNTLIN
AGGSWAAELSRWATGRTIPVKPVKGQIVLSEKMPKLLRGCITTSDCYIAQKDNGEILIGSTTEDKGYDTAITYPEINGLV
QGAIRCVPELANVNIKRCWAGLRPGTPDELPILGPEDGVEGYLNACGHFRTGILTSAITGVLLNGLVRGEPLPLDIAPFL
AGRFPNRTEKEMDFALHA

Specific function: Catalyzes the FAD-dependent oxidative deamination of various amines and D-amino acids to yield the corresponding alpha- keto acids, ammonia/amine, and hydrogen peroxide. Oxidizes sarcosine (N-methylglycine), N-ethylglycine and glycine. Can also oxidize th

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DAO family [H]

Homologues:

Organism=Escherichia coli, GI1788574, Length=198, Percent_Identity=29.7979797979798, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR012727 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.3.19 [H]

Molecular weight: Translated: 45296; Mature: 45165

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQYDIVIAGGGVIGASCAYQLSKRRDLKIALIDSKRPGNASRASAGGLWAIGESVGLG
CCCCEEEEEECCCEEHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCC
CGVIFFRMTSAKRKREAAGAAVAVDASTPHILPQSFFDFALASNALYPALHQELMENHGM
HHEEEHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCC
DFKFERTGLKYIIYDEEDQLYAEHIAAQIPHLASEVSWLDRAQLRESEPYVSGEAQGALE
CEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
FLCDHQVSPFRLTDAYTEAARQNGVDVFFNVNVTGVTRQGSRVTGVRTAEAGDFSCNTLI
HHHCCCCCCEEEHHHHHHHHHHCCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCHHEE
NAGGSWAAELSRWATGRTIPVKPVKGQIVLSEKMPKLLRGCITTSDCYIAQKDNGEILIG
ECCCCHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHHHHHCCCCCEEEEECCCCCEEEE
STTEDKGYDTAITYPEINGLVQGAIRCVPELANVNIKRCWAGLRPGTPDELPILGPEDGV
CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCH
EGYLNACGHFRTGILTSAITGVLLNGLVRGEPLPLDIAPFLAGRFPNRTEKEMDFALHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCCCHHHHHEECC
>Mature Secondary Structure 
SKQYDIVIAGGGVIGASCAYQLSKRRDLKIALIDSKRPGNASRASAGGLWAIGESVGLG
CCCEEEEEECCCEEHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCC
CGVIFFRMTSAKRKREAAGAAVAVDASTPHILPQSFFDFALASNALYPALHQELMENHGM
HHEEEHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCC
DFKFERTGLKYIIYDEEDQLYAEHIAAQIPHLASEVSWLDRAQLRESEPYVSGEAQGALE
CEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
FLCDHQVSPFRLTDAYTEAARQNGVDVFFNVNVTGVTRQGSRVTGVRTAEAGDFSCNTLI
HHHCCCCCCEEEHHHHHHHHHHCCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCHHEE
NAGGSWAAELSRWATGRTIPVKPVKGQIVLSEKMPKLLRGCITTSDCYIAQKDNGEILIG
ECCCCHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHHHHHCCCCCEEEEECCCCCEEEE
STTEDKGYDTAITYPEINGLVQGAIRCVPELANVNIKRCWAGLRPGTPDELPILGPEDGV
CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCH
EGYLNACGHFRTGILTSAITGVLLNGLVRGEPLPLDIAPFLAGRFPNRTEKEMDFALHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCCCHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9827558; 11744710 [H]