| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is kbl [C]
Identifier: 34497105
GI number: 34497105
Start: 1787071
End: 1788270
Strand: Direct
Name: kbl [C]
Synonym: CV_1650
Alternate gene names: 34497105
Gene position: 1787071-1788270 (Clockwise)
Preceding gene: 34497104
Following gene: 34497106
Centisome position: 37.61
GC content: 66.92
Gene sequence:
>1200_bases ATGAACCACACCTATCTCGCTCACCTGCAGGCTACGCTGGCCCAGATCCGGGCCGACGGTTTCGAGAAGCCGGAGCGCGT GATCGCCACGCCGCAAAGCGCCGACATCGCGCTGGCCGGCGGCGAGCATGTGCTGAACTTCTGCGCCAACAACTACCTGG GCCTGGCCGACGACAAGCGCCTGGTGCTGGCCGCCAAGGCCGGCATGGACCAGTACGGCTACGGCTGCGCGTCGGTGCGC TTCATCTGCGGCACCCAGTCCATCCACAAGCAGCTGGAAAAATCGATTTCCGAGTTCCTCGGCGCCGACGACACCATCCT GTACTCCAGCTGTTTCGACGCCAACGGCGGCGTGTTCGAAACCCTGCTGACCGAAGAGGACGCGGTGATCTCGGACGAGC TGAACCACGCGTCCATCATCGACGGCGTGCGCCTGTCCAAGGCCAAGCGCTTCCGCTACAAAAACAACGACATGGCCGAT CTGGAGGCGCAGCTGGTCGCCGCCGAACAGGCCGGCGCCCGCTTCAAGCTGATCGTCACCGACGGCGTGTTCTCCATGGA CGGCATCATCGCCGATCTGAAGGGCATCTGCGACCTGGCCGAGCGCCACGACGCGCTGGTGATGGTGGACGACTCGCACG CGGTGGGCTTCATCGGCGAAACCGGCGCCGGCACGCCGGAATACTGCGGCGTCTCCGACCGCGTCGACATCTACACCGGC ACGCTGGGCAAGGCGCTGGGCGGCGCGTCCGGCGGCTACGTCGCCGCGCACCAACCCATCGTCGACCTGCTGCGCCAGCG CTCGCGCCCCTATCTGTTCTCCAACACGCTGGCGCCGGCCATCGCCGCCGCCAGCGTGGAAGTGCTGAACATCCTGAAGG GCGGCGAGGGCGCGGAGCTGCGCGCCAAGGTGCGCCGCAACGCCGAGCTGTTCCGCAAGGAAATGTCCGCCGCCGGCTTC ACCCTGGTGCCGGGCGAACACCCGATCATCCCGGTGATGCTGGGCGATGCCCGCCTGGCAGGCGAGATGGCCGCCAAGCT GCTGGCCGAAGGCGTGTACGTGATCGGCTTCTCCTACCCGGTGGTGCCCAAGGGCAAGGCGCGCATCCGCACCCAGATGT CCGCCGCGCACAGCGAGGAGCAAGTGAAGAAGGCTGTTGCCGCCTTCATCAAGGTCGGCCGCGAGCTGGGCGTAATCTGA
Upstream 100 bases:
>100_bases TAGAATGGCGGCAGTTTCCGGCGCGCAGCCGCCAAGCGCGGCGCGCGGTGCCTGCGGACGCGGGTTCGATTCCCGCGTCC CGCCTATCCAAAGGACTGCC
Downstream 100 bases:
>100_bases TTTGACCGCATGACAGGCCGCGCGGCGTCCGCGCGGCTTCAAGGATAGAGACATGAAGGCGCTTGCCAAGCTGAAGGCCG CTCCCGGCCTGGAAATGACC
Product: 2-amino-3-ketobutyrate coenzyme A ligase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MNHTYLAHLQATLAQIRADGFEKPERVIATPQSADIALAGGEHVLNFCANNYLGLADDKRLVLAAKAGMDQYGYGCASVR FICGTQSIHKQLEKSISEFLGADDTILYSSCFDANGGVFETLLTEEDAVISDELNHASIIDGVRLSKAKRFRYKNNDMAD LEAQLVAAEQAGARFKLIVTDGVFSMDGIIADLKGICDLAERHDALVMVDDSHAVGFIGETGAGTPEYCGVSDRVDIYTG TLGKALGGASGGYVAAHQPIVDLLRQRSRPYLFSNTLAPAIAAASVEVLNILKGGEGAELRAKVRRNAELFRKEMSAAGF TLVPGEHPIIPVMLGDARLAGEMAAKLLAEGVYVIGFSYPVVPKGKARIRTQMSAAHSEEQVKKAVAAFIKVGRELGVI
Sequences:
>Translated_399_residues MNHTYLAHLQATLAQIRADGFEKPERVIATPQSADIALAGGEHVLNFCANNYLGLADDKRLVLAAKAGMDQYGYGCASVR FICGTQSIHKQLEKSISEFLGADDTILYSSCFDANGGVFETLLTEEDAVISDELNHASIIDGVRLSKAKRFRYKNNDMAD LEAQLVAAEQAGARFKLIVTDGVFSMDGIIADLKGICDLAERHDALVMVDDSHAVGFIGETGAGTPEYCGVSDRVDIYTG TLGKALGGASGGYVAAHQPIVDLLRQRSRPYLFSNTLAPAIAAASVEVLNILKGGEGAELRAKVRRNAELFRKEMSAAGF TLVPGEHPIIPVMLGDARLAGEMAAKLLAEGVYVIGFSYPVVPKGKARIRTQMSAAHSEEQVKKAVAAFIKVGRELGVI >Mature_399_residues MNHTYLAHLQATLAQIRADGFEKPERVIATPQSADIALAGGEHVLNFCANNYLGLADDKRLVLAAKAGMDQYGYGCASVR FICGTQSIHKQLEKSISEFLGADDTILYSSCFDANGGVFETLLTEEDAVISDELNHASIIDGVRLSKAKRFRYKNNDMAD LEAQLVAAEQAGARFKLIVTDGVFSMDGIIADLKGICDLAERHDALVMVDDSHAVGFIGETGAGTPEYCGVSDRVDIYTG TLGKALGGASGGYVAAHQPIVDLLRQRSRPYLFSNTLAPAIAAASVEVLNILKGGEGAELRAKVRRNAELFRKEMSAAGF TLVPGEHPIIPVMLGDARLAGEMAAKLLAEGVYVIGFSYPVVPKGKARIRTQMSAAHSEEQVKKAVAAFIKVGRELGVI
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7657118, Length=396, Percent_Identity=55.5555555555556, Blast_Score=426, Evalue=1e-119, Organism=Homo sapiens, GI284448556, Length=420, Percent_Identity=52.3809523809524, Blast_Score=416, Evalue=1e-116, Organism=Homo sapiens, GI83977440, Length=358, Percent_Identity=35.195530726257, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI83977442, Length=358, Percent_Identity=35.195530726257, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI83977444, Length=358, Percent_Identity=35.195530726257, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI4502025, Length=365, Percent_Identity=32.3287671232877, Blast_Score=204, Evalue=8e-53, Organism=Homo sapiens, GI40316939, Length=365, Percent_Identity=32.3287671232877, Blast_Score=204, Evalue=8e-53, Organism=Homo sapiens, GI4758668, Length=364, Percent_Identity=30.7692307692308, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI119220554, Length=367, Percent_Identity=31.0626702997275, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI5454084, Length=390, Percent_Identity=26.4102564102564, Blast_Score=117, Evalue=1e-26, Organism=Escherichia coli, GI1790046, Length=399, Percent_Identity=65.4135338345865, Blast_Score=537, Evalue=1e-154, Organism=Escherichia coli, GI1786993, Length=348, Percent_Identity=33.0459770114943, Blast_Score=187, Evalue=8e-49, Organism=Caenorhabditis elegans, GI71994529, Length=395, Percent_Identity=54.1772151898734, Blast_Score=432, Evalue=1e-121, Organism=Caenorhabditis elegans, GI32566772, Length=371, Percent_Identity=30.4582210242588, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17560914, Length=358, Percent_Identity=31.5642458100559, Blast_Score=178, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17560912, Length=358, Percent_Identity=31.5642458100559, Blast_Score=178, Evalue=5e-45, Organism=Caenorhabditis elegans, GI71982617, Length=269, Percent_Identity=28.996282527881, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71982625, Length=269, Percent_Identity=28.996282527881, Blast_Score=113, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6320438, Length=375, Percent_Identity=31.7333333333333, Blast_Score=192, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6320267, Length=368, Percent_Identity=31.25, Blast_Score=177, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6323954, Length=302, Percent_Identity=27.4834437086093, Blast_Score=105, Evalue=1e-23, Organism=Drosophila melanogaster, GI24662918, Length=392, Percent_Identity=57.6530612244898, Blast_Score=454, Evalue=1e-128, Organism=Drosophila melanogaster, GI17137420, Length=349, Percent_Identity=31.5186246418338, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI17136286, Length=375, Percent_Identity=30.6666666666667, Blast_Score=164, Evalue=8e-41, Organism=Drosophila melanogaster, GI24653280, Length=347, Percent_Identity=25.6484149855908, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI24653276, Length=347, Percent_Identity=25.6484149855908, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI24653278, Length=347, Percent_Identity=25.6484149855908, Blast_Score=109, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011282 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 42632; Mature: 42632
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHTYLAHLQATLAQIRADGFEKPERVIATPQSADIALAGGEHVLNFCANNYLGLADDKR CCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEECCHHHHHHHHCCCCCCCCCCE LVLAAKAGMDQYGYGCASVRFICGTQSIHKQLEKSISEFLGADDTILYSSCFDANGGVFE EEEEEECCCCHHCCCHHHEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEH TLLTEEDAVISDELNHASIIDGVRLSKAKRFRYKNNDMADLEAQLVAAEQAGARFKLIVT HHHCCCCCHHHCCCCCHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEE DGVFSMDGIIADLKGICDLAERHDALVMVDDSHAVGFIGETGAGTPEYCGVSDRVDIYTG CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEC TLGKALGGASGGYVAAHQPIVDLLRQRSRPYLFSNTLAPAIAAASVEVLNILKGGEGAEL CHHHHHCCCCCCEEEECCHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCHHH RAKVRRNAELFRKEMSAAGFTLVPGEHPIIPVMLGDARLAGEMAAKLLAEGVYVIGFSYP HHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCC VVPKGKARIRTQMSAAHSEEQVKKAVAAFIKVGRELGVI CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNHTYLAHLQATLAQIRADGFEKPERVIATPQSADIALAGGEHVLNFCANNYLGLADDKR CCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEECCHHHHHHHHCCCCCCCCCCE LVLAAKAGMDQYGYGCASVRFICGTQSIHKQLEKSISEFLGADDTILYSSCFDANGGVFE EEEEEECCCCHHCCCHHHEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEH TLLTEEDAVISDELNHASIIDGVRLSKAKRFRYKNNDMADLEAQLVAAEQAGARFKLIVT HHHCCCCCHHHCCCCCHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEE DGVFSMDGIIADLKGICDLAERHDALVMVDDSHAVGFIGETGAGTPEYCGVSDRVDIYTG CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEC TLGKALGGASGGYVAAHQPIVDLLRQRSRPYLFSNTLAPAIAAASVEVLNILKGGEGAEL CHHHHHCCCCCCEEEECCHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCHHH RAKVRRNAELFRKEMSAAGFTLVPGEHPIIPVMLGDARLAGEMAAKLLAEGVYVIGFSYP HHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCC VVPKGKARIRTQMSAAHSEEQVKKAVAAFIKVGRELGVI CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]