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The map label for this gene is por [H]

Identifier: 34497101

GI number: 34497101

Start: 1783705

End: 1784847

Strand: Reverse

Name: por [H]

Synonym: CV_1646

Alternate gene names: 34497101

Gene position: 1784847-1783705 (Counterclockwise)

Preceding gene: 34497102

Following gene: 34497096

Centisome position: 37.57

GC content: 60.98

Gene sequence:

>1143_bases
ATGAAGAAAATCGTACTCGCCGCCGCAGTCGCAGCGGCCATCCCGGCATTCGCTCAAGCCGACGTCAACCTCTACGGCTC
GCTGCGCGCCGGCGTCTCCGTCACCAAGAACAGCACCAACAACTACAGCTCCACTTTCGGCGTCGACGATTTCGGCAGCC
GTATCGGCTTCCGCGGCAACGAAGATCTGGGCAACGGCCTGAAAACCATCTGGCAAGTGGAAACCGGCTTCGCCATGGAT
GGCGTCTCCGGCGGCGGCACCGCGTCCGGCACCTTCGCCAACCGTGAAAGCTATGTTGGCATCGACAGCAGTTACGGCAA
GCTGCGCGTGGGTTACCTGACCGACGTGCTGGGCGACAGCGAAGCCACCGACAACCTGTACGGTCCGCGCCGCGACGGCA
TGGGCACCAACTTCCCGCTGTACGAGGCAACCGACCTGTTCTCCTACGGCGACAGCCGCTACAAAAACAGCGTCCGCTAC
GATTCCCCCACCTGGAATGGCTTCAATCTCACGCTGCAATACGGCGCGGGCGAGAACGCCGCCGTAGGCCAGATGAAACA
GGGCGAACAATACGGCGCACGTTTGGCCTATCAGAACTCCGGCTTCTTCGGCGCCTGGGCCTACGCCGGCGTGCTGAACA
CCAAGGGCGGCAGCAACAGCTCCACCAACCGCCTGGAAGGCGGTTACAGCGCCAACAACCTGTACCTGGCCGCTACCTAC
CAGTGGCTGACCACCTATGGCAACGCTTCCGCGCAAGCCAAGAATGCCGACGGCACACTCAAGGTTGACGACAACAAACA
GCCGGTTTATGTCATTCCCGGCATCAAGCAATTGAGCCCGACCATAGGCAGCGGCACCAACAAGGTGGAAAACACCGGCT
GGGCCATCAACGCCGCCTATACCATCGGTAACTTCAAGCCGTCCATCGTCTACTCGAAGCGCGGCGACGCCAAGATCGAC
GGCGTCCGCTACAGCCTGGGCGCCAGCCAGTGGGCGGCAGCTCTGGACTACACCCTGAGCAAGCGCACCATGGTGCAAGT
CGGCTACGGCGAACTGAAGGAAAACAAGGACGCTCAAACCATCAACCAGCACGCCAAAGATACGTCCTCGCTGGCTTGGG
CGATGATGAAGCACAACTTCTAA

Upstream 100 bases:

>100_bases
ATCCCTCCTCCACACTGCCGAACCTATCACGGCGGAATAAAAACAACACCGCCGGCAGGCGCCTCAGGGCAAGAAATCGA
AACAAAGGGTTTTAGAGAAA

Downstream 100 bases:

>100_bases
GTCTCCTCGGTTTCTGGAATGTGCGAACAGCCGCCCCACAGGGCGGCTGTTTTGCTTTGAACGGCAGCCAAACAAAAACG
CCAGCCCTGAGGCTGGCGTT

Product: outer membrane porin

Products: NA

Alternate protein names: PIB; Protein IB; Porin [H]

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MKKIVLAAAVAAAIPAFAQADVNLYGSLRAGVSVTKNSTNNYSSTFGVDDFGSRIGFRGNEDLGNGLKTIWQVETGFAMD
GVSGGGTASGTFANRESYVGIDSSYGKLRVGYLTDVLGDSEATDNLYGPRRDGMGTNFPLYEATDLFSYGDSRYKNSVRY
DSPTWNGFNLTLQYGAGENAAVGQMKQGEQYGARLAYQNSGFFGAWAYAGVLNTKGGSNSSTNRLEGGYSANNLYLAATY
QWLTTYGNASAQAKNADGTLKVDDNKQPVYVIPGIKQLSPTIGSGTNKVENTGWAINAAYTIGNFKPSIVYSKRGDAKID
GVRYSLGASQWAAALDYTLSKRTMVQVGYGELKENKDAQTINQHAKDTSSLAWAMMKHNF

Sequences:

>Translated_380_residues
MKKIVLAAAVAAAIPAFAQADVNLYGSLRAGVSVTKNSTNNYSSTFGVDDFGSRIGFRGNEDLGNGLKTIWQVETGFAMD
GVSGGGTASGTFANRESYVGIDSSYGKLRVGYLTDVLGDSEATDNLYGPRRDGMGTNFPLYEATDLFSYGDSRYKNSVRY
DSPTWNGFNLTLQYGAGENAAVGQMKQGEQYGARLAYQNSGFFGAWAYAGVLNTKGGSNSSTNRLEGGYSANNLYLAATY
QWLTTYGNASAQAKNADGTLKVDDNKQPVYVIPGIKQLSPTIGSGTNKVENTGWAINAAYTIGNFKPSIVYSKRGDAKID
GVRYSLGASQWAAALDYTLSKRTMVQVGYGELKENKDAQTINQHAKDTSSLAWAMMKHNF
>Mature_380_residues
MKKIVLAAAVAAAIPAFAQADVNLYGSLRAGVSVTKNSTNNYSSTFGVDDFGSRIGFRGNEDLGNGLKTIWQVETGFAMD
GVSGGGTASGTFANRESYVGIDSSYGKLRVGYLTDVLGDSEATDNLYGPRRDGMGTNFPLYEATDLFSYGDSRYKNSVRY
DSPTWNGFNLTLQYGAGENAAVGQMKQGEQYGARLAYQNSGFFGAWAYAGVLNTKGGSNSSTNRLEGGYSANNLYLAATY
QWLTTYGNASAQAKNADGTLKVDDNKQPVYVIPGIKQLSPTIGSGTNKVENTGWAINAAYTIGNFKPSIVYSKRGDAKID
GVRYSLGASQWAAALDYTLSKRTMVQVGYGELKENKDAQTINQHAKDTSSLAWAMMKHNF

Specific function: Serves as a slightly cation selective porin [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Gram-negative porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013793
- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40757; Mature: 40757

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIVLAAAVAAAIPAFAQADVNLYGSLRAGVSVTKNSTNNYSSTFGVDDFGSRIGFRGN
CCHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEECCCCCCCCCCCCCHHHHHCCCCCC
EDLGNGLKTIWQVETGFAMDGVSGGGTASGTFANRESYVGIDSSYGKLRVGYLTDVLGDS
HHHHHHHHEEEEEECCCEECCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEHHHHHCCCC
EATDNLYGPRRDGMGTNFPLYEATDLFSYGDSRYKNSVRYDSPTWNGFNLTLQYGAGENA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEEECCCCCC
AVGQMKQGEQYGARLAYQNSGFFGAWAYAGVLNTKGGSNSSTNRLEGGYSANNLYLAATY
CCCCCCCCHHHCCEEEEECCCCEEHHEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEE
QWLTTYGNASAQAKNADGTLKVDDNKQPVYVIPGIKQLSPTIGSGTNKVENTGWAINAAY
EEEHHCCCCCCCCCCCCCEEEECCCCCCEEEECCHHHHCCCCCCCCCCCCCCCEEEEEEE
TIGNFKPSIVYSKRGDAKIDGVRYSLGASQWAAALDYTLSKRTMVQVGYGELKENKDAQT
EECCCCCEEEEECCCCCEECCEEEECCHHHHHHHHHHHHCCCEEEEECCCHHCCCCCHHH
INQHAKDTSSLAWAMMKHNF
HHHHHCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIVLAAAVAAAIPAFAQADVNLYGSLRAGVSVTKNSTNNYSSTFGVDDFGSRIGFRGN
CCHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEECCCCCCCCCCCCCHHHHHCCCCCC
EDLGNGLKTIWQVETGFAMDGVSGGGTASGTFANRESYVGIDSSYGKLRVGYLTDVLGDS
HHHHHHHHEEEEEECCCEECCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEHHHHHCCCC
EATDNLYGPRRDGMGTNFPLYEATDLFSYGDSRYKNSVRYDSPTWNGFNLTLQYGAGENA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEEECCCCCC
AVGQMKQGEQYGARLAYQNSGFFGAWAYAGVLNTKGGSNSSTNRLEGGYSANNLYLAATY
CCCCCCCCHHHCCEEEEECCCCEEHHEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEE
QWLTTYGNASAQAKNADGTLKVDDNKQPVYVIPGIKQLSPTIGSGTNKVENTGWAINAAY
EEEHHCCCCCCCCCCCCCEEEECCCCCCEEEECCHHHHCCCCCCCCCCCCCCCEEEEEEE
TIGNFKPSIVYSKRGDAKIDGVRYSLGASQWAAALDYTLSKRTMVQVGYGELKENKDAQT
EECCCCCEEEEECCCCCEECCEEEECCHHHHHHHHHHHHCCCEEEEECCCHHCCCCCHHH
INQHAKDTSSLAWAMMKHNF
HHHHHCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1330818 [H]