| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is dgk [H]
Identifier: 34497089
GI number: 34497089
Start: 1772110
End: 1772745
Strand: Direct
Name: dgk [H]
Synonym: CV_1634
Alternate gene names: 34497089
Gene position: 1772110-1772745 (Clockwise)
Preceding gene: 34497088
Following gene: 34497090
Centisome position: 37.3
GC content: 63.36
Gene sequence:
>636_bases ATGAGTCAATTGCGATACGTGGTGGTGGAGGGGCCGATAGGCTCGGGCAAGTCTTCGCTGGCGCGCCGGCTGTCCGAATA CTGGGGCGTGCAGCTGAAGGCCGAGGACCCGGCCGCCAATCCCTTCCTGCCGCGCTTCTATCGCAATATGCCGGCGCACG CGCTGTCCACCCAGCTGAGCTTCCTGCTGCAGCGCGCCGACATCGCGCGCGAGATGATCAGCGGCGAATTGCAGGCCGCG CCGCTGGTATCCGACTTCCTGTTTGAGAAGGACGCGCTGTTCGCCCGCCTCAACCTGGACGAGCACGAGCTGGCGATCTA CCAGCGCCTGGCGAGGCTGGCGTTGCCGGAATACCCGGTGCCGGACCTGGTGATCTATCTGCAGGCGTCCGAGGACATCC TGCTGCAGCGGGTGGCCGCGCGCGCCGTCGATTACGAGGTCAACTTCCCCGAGGGCTACCTCAAACGCGTGCATGCCGGC TACAGCGAGTTTTTCCACCAGTACGAGGCGGCGCCGTTGCTGATCGTCAACACCGACCACTTGAATCTGGTGGACGGCGA CGAGGACTTCGAGTTATTGATCCGCTGCATTGCCGAAATGCGCGGCCAGCGCAGTTATTTCAACAAGAGCGTCTGA
Upstream 100 bases:
>100_bases TGCCGGGCGTCGGCGACATCGCCGCGCTGGCGGCGGACCTGGCCGGTTCCGGCGTGGCGCGCCTGGACGACGAGTCCAAC CCCAACAAACAGGAACAAGC
Downstream 100 bases:
>100_bases CCGGGTTGGTTCCCGCGCGGCGCCGAAGATGGAACGCGAGGAAGTCGAGATGAAAATAACCGTCAATACCCTGCACAAGC TGGCCGAGGAAGGCCGGAAG
Product: deoxyguanosine kinase
Products: NA
Alternate protein names: DGUO kinase; dGK [H]
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSQLRYVVVEGPIGSGKSSLARRLSEYWGVQLKAEDPAANPFLPRFYRNMPAHALSTQLSFLLQRADIAREMISGELQAA PLVSDFLFEKDALFARLNLDEHELAIYQRLARLALPEYPVPDLVIYLQASEDILLQRVAARAVDYEVNFPEGYLKRVHAG YSEFFHQYEAAPLLIVNTDHLNLVDGDEDFELLIRCIAEMRGQRSYFNKSV
Sequences:
>Translated_211_residues MSQLRYVVVEGPIGSGKSSLARRLSEYWGVQLKAEDPAANPFLPRFYRNMPAHALSTQLSFLLQRADIAREMISGELQAA PLVSDFLFEKDALFARLNLDEHELAIYQRLARLALPEYPVPDLVIYLQASEDILLQRVAARAVDYEVNFPEGYLKRVHAG YSEFFHQYEAAPLLIVNTDHLNLVDGDEDFELLIRCIAEMRGQRSYFNKSV >Mature_210_residues SQLRYVVVEGPIGSGKSSLARRLSEYWGVQLKAEDPAANPFLPRFYRNMPAHALSTQLSFLLQRADIAREMISGELQAAP LVSDFLFEKDALFARLNLDEHELAIYQRLARLALPEYPVPDLVIYLQASEDILLQRVAARAVDYEVNFPEGYLKRVHAGY SEFFHQYEAAPLLIVNTDHLNLVDGDEDFELLIRCIAEMRGQRSYFNKSV
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dGTP for DNA metabolism. Highly specific toward deoxyguanosine (dGuo) and deoxyinosine (dIno). Only marginal activity is observed with guanosine. UTP is slightly more efficient as ph
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.113 [H]
Molecular weight: Translated: 24080; Mature: 23949
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLRYVVVEGPIGSGKSSLARRLSEYWGVQLKAEDPAANPFLPRFYRNMPAHALSTQLS CCCEEEEEEECCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHCCCHHHHHHHHH FLLQRADIAREMISGELQAAPLVSDFLFEKDALFARLNLDEHELAIYQRLARLALPEYPV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCC PDLVIYLQASEDILLQRVAARAVDYEVNFPEGYLKRVHAGYSEFFHQYEAAPLLIVNTDH CCEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHCCCCEEEEECCC LNLVDGDEDFELLIRCIAEMRGQRSYFNKSV EEEECCCCHHHHHHHHHHHHHCCHHHHCCCC >Mature Secondary Structure SQLRYVVVEGPIGSGKSSLARRLSEYWGVQLKAEDPAANPFLPRFYRNMPAHALSTQLS CCEEEEEEECCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHCCCHHHHHHHHH FLLQRADIAREMISGELQAAPLVSDFLFEKDALFARLNLDEHELAIYQRLARLALPEYPV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCC PDLVIYLQASEDILLQRVAARAVDYEVNFPEGYLKRVHAGYSEFFHQYEAAPLLIVNTDH CCEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHCCCCEEEEECCC LNLVDGDEDFELLIRCIAEMRGQRSYFNKSV EEEECCCCHHHHHHHHHHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]