| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497070
Identifier: 34497070
GI number: 34497070
Start: 1742007
End: 1743158
Strand: Reverse
Name: 34497070
Synonym: CV_1615
Alternate gene names: NA
Gene position: 1743158-1742007 (Counterclockwise)
Preceding gene: 34497071
Following gene: 34497069
Centisome position: 36.69
GC content: 65.54
Gene sequence:
>1152_bases ATGGACATTCACAGGACCTTGAAACCGATGATCCGCATGAAACTGGCGGCCGCTGCCGCCCTCTCCTCCCTCGCCCTGCT CACCGGCTGCGCCACCCCGCTGGCAGGCAAGGCGCCCGACGAAGCCGCCCGCAAGGTGATGCTGCAGAACTGGAAAAACG CCAGCTACAACTTCGACGCCCAGATCGGCTTCGACAAGCTGGTCTTCACCGATGGCGACTCCAAGCTGTCCCAGCCCGAT ATCGCCGACACCATAGACCAGGTCGGCCGCTCGGTCCGCGTCAATGTCAGCGGCGCGGTCGACGCGCCCGGCGGCCGGAT GGAAGCCATCCCCGAGCTGCGCTTCGAGCGCCGCAACCTGCTGGCCAGCATTAAGATGCCGCTGCAGTTCCACGCCCAGG ACATGTCGCTATTGCTGGACCCGTCCGCCGTAGACCTGTTCCTGCCCTCGCTGCGCAAACAGTCTGGCAAATTCATCCGC GCCAGGCTGCCGGCCGACATGGCCGCCAGGATTCCGCTGAAGGAAATGTACCAGGCGATGCCCAAGATCATCGACGACGC GTACGCGCAGGTGGACAAGCAGGCCTTCAGCCTCCAGCCGCTGGACGCCTATGCCGGCGAAGTCGGCGCGCATTACAAGC TGCGCATGGAGCTGAGCCGCCAGCAGGAGCAGAAGCTGACCCTGCAGATGCTGGACGGCCTGGCCAAGGTGGCGCGCGAG CAGGCCAAGCAGCCTGACGACAAATCCGGCGCCGAGGCGATGATCCGCCTGGTGCAGGGCCTGATCAAGCTCGAGCCGAC CAGCGGCGAAAAGAGCCGCACGGTCAGCGACCTCTACGCCAGCCGCGGCGGCGATCTGCTGGCCCTGCGCCAGAAGATCC ACATCGAAGCGCCCGAGTTCAGCGGCGACGCCTACGTCAACGTGCGCTACAGCCACTACGGCAAGCCGCAGTTCGTCTAC CAGCTCAGCGAAAGCGACATCGTCGATTTCGACAAGCTGGAACTGCCCGACTGGCTGAAGGACACCGACAAGCTGCTGCC CGGCGATCACGCCGAAGCTCCGGCGCCTGCCGCGGCCGCGGAACCGCAGGCGCAGCCGTCCCAGCCCCAGGCCAAGACCA AGAAAAAGCGCAAGACCCGCCGCGCGCAATAA
Upstream 100 bases:
>100_bases GGCGGCCGCCGGCCGTCCCGCGGGGACAAGCCAAAGCCATGGCCATCCCGGCTGCGATATAATCCCGGCATACCCAGACG ATCGGCCAAGATCGCGCACC
Downstream 100 bases:
>100_bases TCGCCAACACATTCGCCGGCCCGGCGATGAACCGGGCCGGCGCCGTTCCGGTCCTATCCTTTTTCATTCCGGTCCGCACC GCCCGCAAGGACATTGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MDIHRTLKPMIRMKLAAAAALSSLALLTGCATPLAGKAPDEAARKVMLQNWKNASYNFDAQIGFDKLVFTDGDSKLSQPD IADTIDQVGRSVRVNVSGAVDAPGGRMEAIPELRFERRNLLASIKMPLQFHAQDMSLLLDPSAVDLFLPSLRKQSGKFIR ARLPADMAARIPLKEMYQAMPKIIDDAYAQVDKQAFSLQPLDAYAGEVGAHYKLRMELSRQQEQKLTLQMLDGLAKVARE QAKQPDDKSGAEAMIRLVQGLIKLEPTSGEKSRTVSDLYASRGGDLLALRQKIHIEAPEFSGDAYVNVRYSHYGKPQFVY QLSESDIVDFDKLELPDWLKDTDKLLPGDHAEAPAPAAAAEPQAQPSQPQAKTKKKRKTRRAQ
Sequences:
>Translated_383_residues MDIHRTLKPMIRMKLAAAAALSSLALLTGCATPLAGKAPDEAARKVMLQNWKNASYNFDAQIGFDKLVFTDGDSKLSQPD IADTIDQVGRSVRVNVSGAVDAPGGRMEAIPELRFERRNLLASIKMPLQFHAQDMSLLLDPSAVDLFLPSLRKQSGKFIR ARLPADMAARIPLKEMYQAMPKIIDDAYAQVDKQAFSLQPLDAYAGEVGAHYKLRMELSRQQEQKLTLQMLDGLAKVARE QAKQPDDKSGAEAMIRLVQGLIKLEPTSGEKSRTVSDLYASRGGDLLALRQKIHIEAPEFSGDAYVNVRYSHYGKPQFVY QLSESDIVDFDKLELPDWLKDTDKLLPGDHAEAPAPAAAAEPQAQPSQPQAKTKKKRKTRRAQ >Mature_383_residues MDIHRTLKPMIRMKLAAAAALSSLALLTGCATPLAGKAPDEAARKVMLQNWKNASYNFDAQIGFDKLVFTDGDSKLSQPD IADTIDQVGRSVRVNVSGAVDAPGGRMEAIPELRFERRNLLASIKMPLQFHAQDMSLLLDPSAVDLFLPSLRKQSGKFIR ARLPADMAARIPLKEMYQAMPKIIDDAYAQVDKQAFSLQPLDAYAGEVGAHYKLRMELSRQQEQKLTLQMLDGLAKVARE QAKQPDDKSGAEAMIRLVQGLIKLEPTSGEKSRTVSDLYASRGGDLLALRQKIHIEAPEFSGDAYVNVRYSHYGKPQFVY QLSESDIVDFDKLELPDWLKDTDKLLPGDHAEAPAPAAAAEPQAQPSQPQAKTKKKRKTRRAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42364; Mature: 42364
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIHRTLKPMIRMKLAAAAALSSLALLTGCATPLAGKAPDEAARKVMLQNWKNASYNFDA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEC QIGFDKLVFTDGDSKLSQPDIADTIDQVGRSVRVNVSGAVDAPGGRMEAIPELRFERRNL CCCCCEEEEECCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH LASIKMPLQFHAQDMSLLLDPSAVDLFLPSLRKQSGKFIRARLPADMAARIPLKEMYQAM HHHHCCCHHCCCCCHHEEECCHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHH PKIIDDAYAQVDKQAFSLQPLDAYAGEVGAHYKLRMELSRQQEQKLTLQMLDGLAKVARE HHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH QAKQPDDKSGAEAMIRLVQGLIKLEPTSGEKSRTVSDLYASRGGDLLALRQKIHIEAPEF HHCCCCCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCEEEEHHHHEECCCCC SGDAYVNVRYSHYGKPQFVYQLSESDIVDFDKLELPDWLKDTDKLLPGDHAEAPAPAAAA CCCEEEEEEECCCCCCEEEEEECCCCCCCCHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC EPQAQPSQPQAKTKKKRKTRRAQ CCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MDIHRTLKPMIRMKLAAAAALSSLALLTGCATPLAGKAPDEAARKVMLQNWKNASYNFDA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEC QIGFDKLVFTDGDSKLSQPDIADTIDQVGRSVRVNVSGAVDAPGGRMEAIPELRFERRNL CCCCCEEEEECCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH LASIKMPLQFHAQDMSLLLDPSAVDLFLPSLRKQSGKFIRARLPADMAARIPLKEMYQAM HHHHCCCHHCCCCCHHEEECCHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHH PKIIDDAYAQVDKQAFSLQPLDAYAGEVGAHYKLRMELSRQQEQKLTLQMLDGLAKVARE HHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH QAKQPDDKSGAEAMIRLVQGLIKLEPTSGEKSRTVSDLYASRGGDLLALRQKIHIEAPEF HHCCCCCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCEEEEHHHHEECCCCC SGDAYVNVRYSHYGKPQFVYQLSESDIVDFDKLELPDWLKDTDKLLPGDHAEAPAPAAAA CCCEEEEEEECCCCCCEEEEEECCCCCCCCHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC EPQAQPSQPQAKTKKKRKTRRAQ CCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA