The gene/protein map for NC_005085 is currently unavailable.
Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34497044

Identifier: 34497044

GI number: 34497044

Start: 1713563

End: 1714327

Strand: Direct

Name: 34497044

Synonym: CV_1589

Alternate gene names: NA

Gene position: 1713563-1714327 (Clockwise)

Preceding gene: 34497041

Following gene: 34497045

Centisome position: 36.07

GC content: 68.63

Gene sequence:

>765_bases
GTGAAGTTGGCGCGCGGTCTGCGCCGAAAATGCGAGGGATGGGATGTCATCTGCTATGCTGGAGCCCCCTGGGATCGCAA
TTTCAATGTCATGGATTTATCCGCATCGTTGTTCCCCGGCTGGGCGCTGTGGCTGGGATGCGCGCTGGCGGCGGCCTTGC
TGGCCTTGGCGGCGCTTCGCGTGCGATGGCGCGCGCTCGATCCGGCGGCGCTGAACGCCTGGATGGGCGCCTGCGTGCTG
GATCTGGCGCTGTGGCTGCTGCGCGGCGGGCTGCAGCCCGGACTATCCTTCCATCTGCTGGGCGCGGCGCTGCTGACGCT
GATGATGGGGCCATGGCTGGCCTTGCTGGCGCTGGCTGTGGCGCAGCTGGCGCTGGCGGCGGCCGGGCACGCGGACTGGT
CGGCGCTGGGATTGAACTGGCTGTTGACGCCGCTGCCGGCGGTGGCTGTGACGGCCGGCATGCTGGAACTGGCGCGGCGG
CGCTTGCCCGCCCATTTCTTCATCTATGTCTTCGTCAACGGCTTTCTGGCCGGCGGGGCCAGCCTGCTGGCGGCGGCCCT
GTGCGGCGTGCTGGCGCTGGGCGCTGCCGGCGCCTATCCCTGGGACGGCTTGCTGGGAGAGGCCTTGCCCTACTATTTTC
TGCTGTCGTGGTCGGAGGCGTTCACCACCGGCCTGCTGTTGGCGGTGCTCACCGTGTACAAGCCCCGCTGGGTATCGACT
TTCGACGACGGGCGCTATCTCGGCGGCAAGCCGGGGCCGAGTTGA

Upstream 100 bases:

>100_bases
ATGTCTTCGGCCAGGGCCAGGGCGACTTGCTGGGCGATCAGGTGGGGGGCAGGCAGGGGCATACGGGTCTCCATCCAAAA
ACGTATTGTAACGGCAGGCG

Downstream 100 bases:

>100_bases
GCGCCGTCGGCGCGCCCGGCCATGCGGAATGGCGATGGTTTCATCGGTCTGATAAAGGAGGAGGCGATGCCCTTCGTTTT
GTGGAGTCTGTTGCTGGCGG

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKLARGLRRKCEGWDVICYAGAPWDRNFNVMDLSASLFPGWALWLGCALAAALLALAALRVRWRALDPAALNAWMGACVL
DLALWLLRGGLQPGLSFHLLGAALLTLMMGPWLALLALAVAQLALAAAGHADWSALGLNWLLTPLPAVAVTAGMLELARR
RLPAHFFIYVFVNGFLAGGASLLAAALCGVLALGAAGAYPWDGLLGEALPYYFLLSWSEAFTTGLLLAVLTVYKPRWVST
FDDGRYLGGKPGPS

Sequences:

>Translated_254_residues
MKLARGLRRKCEGWDVICYAGAPWDRNFNVMDLSASLFPGWALWLGCALAAALLALAALRVRWRALDPAALNAWMGACVL
DLALWLLRGGLQPGLSFHLLGAALLTLMMGPWLALLALAVAQLALAAAGHADWSALGLNWLLTPLPAVAVTAGMLELARR
RLPAHFFIYVFVNGFLAGGASLLAAALCGVLALGAAGAYPWDGLLGEALPYYFLLSWSEAFTTGLLLAVLTVYKPRWVST
FDDGRYLGGKPGPS
>Mature_254_residues
MKLARGLRRKCEGWDVICYAGAPWDRNFNVMDLSASLFPGWALWLGCALAAALLALAALRVRWRALDPAALNAWMGACVL
DLALWLLRGGLQPGLSFHLLGAALLTLMMGPWLALLALAVAQLALAAAGHADWSALGLNWLLTPLPAVAVTAGMLELARR
RLPAHFFIYVFVNGFLAGGASLLAAALCGVLALGAAGAYPWDGLLGEALPYYFLLSWSEAFTTGLLLAVLTVYKPRWVST
FDDGRYLGGKPGPS

Specific function: Unknown

COG id: COG3235

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27063; Mature: 27063

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLARGLRRKCEGWDVICYAGAPWDRNFNVMDLSASLFPGWALWLGCALAAALLALAALR
CCHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCHHHCCHHHHHHHHHHHHHHHHHHHHH
VRWRALDPAALNAWMGACVLDLALWLLRGGLQPGLSFHLLGAALLTLMMGPWLALLALAV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLALAAAGHADWSALGLNWLLTPLPAVAVTAGMLELARRRLPAHFFIYVFVNGFLAGGA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHH
SLLAAALCGVLALGAAGAYPWDGLLGEALPYYFLLSWSEAFTTGLLLAVLTVYKPRWVST
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FDDGRYLGGKPGPS
CCCCCCCCCCCCCC
>Mature Secondary Structure
MKLARGLRRKCEGWDVICYAGAPWDRNFNVMDLSASLFPGWALWLGCALAAALLALAALR
CCHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCHHHCCHHHHHHHHHHHHHHHHHHHHH
VRWRALDPAALNAWMGACVLDLALWLLRGGLQPGLSFHLLGAALLTLMMGPWLALLALAV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLALAAAGHADWSALGLNWLLTPLPAVAVTAGMLELARRRLPAHFFIYVFVNGFLAGGA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHH
SLLAAALCGVLALGAAGAYPWDGLLGEALPYYFLLSWSEAFTTGLLLAVLTVYKPRWVST
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FDDGRYLGGKPGPS
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA