| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497044
Identifier: 34497044
GI number: 34497044
Start: 1713563
End: 1714327
Strand: Direct
Name: 34497044
Synonym: CV_1589
Alternate gene names: NA
Gene position: 1713563-1714327 (Clockwise)
Preceding gene: 34497041
Following gene: 34497045
Centisome position: 36.07
GC content: 68.63
Gene sequence:
>765_bases GTGAAGTTGGCGCGCGGTCTGCGCCGAAAATGCGAGGGATGGGATGTCATCTGCTATGCTGGAGCCCCCTGGGATCGCAA TTTCAATGTCATGGATTTATCCGCATCGTTGTTCCCCGGCTGGGCGCTGTGGCTGGGATGCGCGCTGGCGGCGGCCTTGC TGGCCTTGGCGGCGCTTCGCGTGCGATGGCGCGCGCTCGATCCGGCGGCGCTGAACGCCTGGATGGGCGCCTGCGTGCTG GATCTGGCGCTGTGGCTGCTGCGCGGCGGGCTGCAGCCCGGACTATCCTTCCATCTGCTGGGCGCGGCGCTGCTGACGCT GATGATGGGGCCATGGCTGGCCTTGCTGGCGCTGGCTGTGGCGCAGCTGGCGCTGGCGGCGGCCGGGCACGCGGACTGGT CGGCGCTGGGATTGAACTGGCTGTTGACGCCGCTGCCGGCGGTGGCTGTGACGGCCGGCATGCTGGAACTGGCGCGGCGG CGCTTGCCCGCCCATTTCTTCATCTATGTCTTCGTCAACGGCTTTCTGGCCGGCGGGGCCAGCCTGCTGGCGGCGGCCCT GTGCGGCGTGCTGGCGCTGGGCGCTGCCGGCGCCTATCCCTGGGACGGCTTGCTGGGAGAGGCCTTGCCCTACTATTTTC TGCTGTCGTGGTCGGAGGCGTTCACCACCGGCCTGCTGTTGGCGGTGCTCACCGTGTACAAGCCCCGCTGGGTATCGACT TTCGACGACGGGCGCTATCTCGGCGGCAAGCCGGGGCCGAGTTGA
Upstream 100 bases:
>100_bases ATGTCTTCGGCCAGGGCCAGGGCGACTTGCTGGGCGATCAGGTGGGGGGCAGGCAGGGGCATACGGGTCTCCATCCAAAA ACGTATTGTAACGGCAGGCG
Downstream 100 bases:
>100_bases GCGCCGTCGGCGCGCCCGGCCATGCGGAATGGCGATGGTTTCATCGGTCTGATAAAGGAGGAGGCGATGCCCTTCGTTTT GTGGAGTCTGTTGCTGGCGG
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MKLARGLRRKCEGWDVICYAGAPWDRNFNVMDLSASLFPGWALWLGCALAAALLALAALRVRWRALDPAALNAWMGACVL DLALWLLRGGLQPGLSFHLLGAALLTLMMGPWLALLALAVAQLALAAAGHADWSALGLNWLLTPLPAVAVTAGMLELARR RLPAHFFIYVFVNGFLAGGASLLAAALCGVLALGAAGAYPWDGLLGEALPYYFLLSWSEAFTTGLLLAVLTVYKPRWVST FDDGRYLGGKPGPS
Sequences:
>Translated_254_residues MKLARGLRRKCEGWDVICYAGAPWDRNFNVMDLSASLFPGWALWLGCALAAALLALAALRVRWRALDPAALNAWMGACVL DLALWLLRGGLQPGLSFHLLGAALLTLMMGPWLALLALAVAQLALAAAGHADWSALGLNWLLTPLPAVAVTAGMLELARR RLPAHFFIYVFVNGFLAGGASLLAAALCGVLALGAAGAYPWDGLLGEALPYYFLLSWSEAFTTGLLLAVLTVYKPRWVST FDDGRYLGGKPGPS >Mature_254_residues MKLARGLRRKCEGWDVICYAGAPWDRNFNVMDLSASLFPGWALWLGCALAAALLALAALRVRWRALDPAALNAWMGACVL DLALWLLRGGLQPGLSFHLLGAALLTLMMGPWLALLALAVAQLALAAAGHADWSALGLNWLLTPLPAVAVTAGMLELARR RLPAHFFIYVFVNGFLAGGASLLAAALCGVLALGAAGAYPWDGLLGEALPYYFLLSWSEAFTTGLLLAVLTVYKPRWVST FDDGRYLGGKPGPS
Specific function: Unknown
COG id: COG3235
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27063; Mature: 27063
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLARGLRRKCEGWDVICYAGAPWDRNFNVMDLSASLFPGWALWLGCALAAALLALAALR CCHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCHHHCCHHHHHHHHHHHHHHHHHHHHH VRWRALDPAALNAWMGACVLDLALWLLRGGLQPGLSFHLLGAALLTLMMGPWLALLALAV HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AQLALAAAGHADWSALGLNWLLTPLPAVAVTAGMLELARRRLPAHFFIYVFVNGFLAGGA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHH SLLAAALCGVLALGAAGAYPWDGLLGEALPYYFLLSWSEAFTTGLLLAVLTVYKPRWVST HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FDDGRYLGGKPGPS CCCCCCCCCCCCCC >Mature Secondary Structure MKLARGLRRKCEGWDVICYAGAPWDRNFNVMDLSASLFPGWALWLGCALAAALLALAALR CCHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCHHHCCHHHHHHHHHHHHHHHHHHHHH VRWRALDPAALNAWMGACVLDLALWLLRGGLQPGLSFHLLGAALLTLMMGPWLALLALAV HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AQLALAAAGHADWSALGLNWLLTPLPAVAVTAGMLELARRRLPAHFFIYVFVNGFLAGGA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHH SLLAAALCGVLALGAAGAYPWDGLLGEALPYYFLLSWSEAFTTGLLLAVLTVYKPRWVST HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FDDGRYLGGKPGPS CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA