| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34497045
Identifier: 34497045
GI number: 34497045
Start: 1714394
End: 1714780
Strand: Direct
Name: 34497045
Synonym: CV_1590
Alternate gene names: NA
Gene position: 1714394-1714780 (Clockwise)
Preceding gene: 34497044
Following gene: 34497056
Centisome position: 36.08
GC content: 71.06
Gene sequence:
>387_bases ATGCCCTTCGTTTTGTGGAGTCTGTTGCTGGCGGCGCTGTTGCCGCTGATCTGGGCCGGCGCGGCCAAGGCCGGCGCGCG TTACGACAACCATCGCCCGCGGGAGTGGGCCGCCAGGCTGGACGGCTATCGCCAGCGCGCCAACTGGGCGCAGCAGAACG CCTGGGAGGCCTTGCCCACCTATCTGGCGGCTGTGGCGGCCGCCTGGTGGATGAAGGTGCCGGTGGCCGAGATGAACGCC GCCGCCGGCGTGTTCGCGCTGGCGCGCGTCGCGCATGGCTTGCTGTACGTGGCGGACAAGGCGGCGCTGCGCTCGCTGGC CTGGCTGGTCGGCCTGCTGGCGGTGCTGTACCTGTTCCTGCGCGCCGGCGGCGTGATCGCCTTATAG
Upstream 100 bases:
>100_bases GCGCTATCTCGGCGGCAAGCCGGGGCCGAGTTGAGCGCCGTCGGCGCGCCCGGCCATGCGGAATGGCGATGGTTTCATCG GTCTGATAAAGGAGGAGGCG
Downstream 100 bases:
>100_bases CCAGCCCTGCGCCTGCAGCGCGGCGCGGACCTGGGGCAGGCCGGCGGTGTGGAAGGCCTGCCAGCCTTGTTCGCGCGCGG CTTCCACGCATTCGATGTTG
Product: transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MPFVLWSLLLAALLPLIWAGAAKAGARYDNHRPREWAARLDGYRQRANWAQQNAWEALPTYLAAVAAAWWMKVPVAEMNA AAGVFALARVAHGLLYVADKAALRSLAWLVGLLAVLYLFLRAGGVIAL
Sequences:
>Translated_128_residues MPFVLWSLLLAALLPLIWAGAAKAGARYDNHRPREWAARLDGYRQRANWAQQNAWEALPTYLAAVAAAWWMKVPVAEMNA AAGVFALARVAHGLLYVADKAALRSLAWLVGLLAVLYLFLRAGGVIAL >Mature_127_residues PFVLWSLLLAALLPLIWAGAAKAGARYDNHRPREWAARLDGYRQRANWAQQNAWEALPTYLAAVAAAWWMKVPVAEMNAA AGVFALARVAHGLLYVADKAALRSLAWLVGLLAVLYLFLRAGGVIAL
Specific function: Unknown
COG id: COG3686
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13996; Mature: 13864
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFVLWSLLLAALLPLIWAGAAKAGARYDNHRPREWAARLDGYRQRANWAQQNAWEALPT CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLAAVAAAWWMKVPVAEMNAAAGVFALARVAHGLLYVADKAALRSLAWLVGLLAVLYLFL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAGGVIAL HCCCCCCC >Mature Secondary Structure PFVLWSLLLAALLPLIWAGAAKAGARYDNHRPREWAARLDGYRQRANWAQQNAWEALPT CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLAAVAAAWWMKVPVAEMNAAAGVFALARVAHGLLYVADKAALRSLAWLVGLLAVLYLFL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAGGVIAL HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA