| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497025
Identifier: 34497025
GI number: 34497025
Start: 1683036
End: 1684943
Strand: Reverse
Name: 34497025
Synonym: CV_1570
Alternate gene names: NA
Gene position: 1684943-1683036 (Counterclockwise)
Preceding gene: 34497026
Following gene: 34497024
Centisome position: 35.46
GC content: 72.38
Gene sequence:
>1908_bases ATGAGTCCGATCTACCCCTTCGCCGCCATCGTCGGCCAAGAGCAATTGAAACAGGCGCTGCTGATCTGCGCGGTGGACCC CACCGTCGGCGGCGTGCTGGTGCGCGGCGACAAGGGCAGCGCCAAGAGCACCGCCGCGCGCGGCCTGGCCGCCGTGCTGC CGCCTATCCGCCGCGCCGCCGGCTGCGGCTACAACTGCGAGCCGGACCACCCGCTGCCGCTATGCCCGGTATGCTCCGGC GGCGCGCGCGAGCTGCATGACGGCCCGGTGCCCTTCATCAACCTGCCACTGGGCGCCACCGAAGACCGGGTGCTGGGCAG CCTGGACTTCGAAAAGGCGCTGCAAGGCGGCAAGCAGGCGTTCAAGCCCGGCCTGTTGGCCGGAGCCCACCGCGGCATGC TGTATATCGACGAAGTGAACCTGCTGGCCGACCACCTGGTGGACGTGCTGCTGGACGCCGCCGCGATGGGCGTCAACACC GTCGAGCGCGAGGGGCTGGCGGTCAGCCACCCGGCGCGGGTGACGCTGCTCGGCACCATGAACCAGGAAGAAGGCGATCT GCGGCCGCAGTTGCTGGACCGCTTCGGCCTGATGGTGGACGTGGCCGCGCCGCGCGAGCCTGGCTTGCGCGCCGAAGTGG TGCGGCGCCGCCTGGCCTTCGAGGCCGACCCGGCCGGCTTCGCCGCCCAGTGGCAAACCGACAGCGAGGCGCTGCGCGAA AACATCGCCGCCGCGCGCGCGCTGCTGCCGCACACCCGGCTCAGCGACCAATTATTTCACTTCGTCAGCGAGCTGTGCTG TGAATTCGAAGTCAGCAGCCTGCGCGCCGACATCGTGCTGAACAAGGCCGCACGCGCGCTGGCCGCGCTGGACGGCCGCA TTGACGCCTCTGCCGAAGACATCCGCGACGCCGCCCGGCTGGTGCTGCCGCACCGCCGCCGCCGCAAGCCTTTCGAGCAG AGCGGGCTGGACCAGGACAAGCTGGAGCGGATGACGCGGCAGGCGTCCACGCCGCCTCCGCTGCCGCAGGACCAGGGCGA GGCCACGCAGCCGCCGCCGGACGCCGACGGCGAGCAGGAGCCGAAGCCTACCGGCCATGGTTCGGAGCAGATCTTCGCCG CCGCGCCGGCCGGCGACATCGCCCGCATCCGCGTCCAGGCGCCGTCGACTGGCGACGCGGCCGGCCGCCGCAGCGACGGC GCCAGCCGCCAGCGCGGACATTACGTGCGCGCCGAGGCCAATCCGCAGCCGGCCCAGCTGGCGGTGGACGCCACGCTGCG CCACGCGATCTTGCGCGATCCGGACCACTTCGCCGTCACCCGCGCCGACCTGCACGACAAGGTCCGCGTCGCCAAGCAGG GCAACCTGATCCTGCTGGTGGTGGACGCGTCGGGATCGATGGCCGCGCGCCAGCGGATGGAGCAGGTCAAGGGCACGGTG CTGAGCCTCTTGGAAGACGCCTACCGCCGCCGCGACCAGGTGGCGCTGATCGCCTTCCGCGGCCAAAAGGCCGAGCTGTT GCTGCCGCCGTGCAACCGCGTCGAACAAGCCGAAGCCGCGCTGCGCGAGCTGCCCACCGGCGGCCGCACGCCGCTGGCGC ACGCGCTGGCGCTGGCCGCCGACACGCTGTCCCGCCAGCTCGGCGGCCCGGCGCCGCTCTTGGTCATCCTCAGCGACGGC CGCGCCAATGTGGCGCTGGACGGCGACGGCGACCCGTGGCGGCAGGCGCTGGACCTGGCCGGCCAGCTGGCCGGCGCGCC GGCGCTGGTGCTGGACACCGAACAGGACTTCGTCCGCCTGGGCCGCGCCCGCGAGCTGGCCGAGGCCCTGGGCGCGGAAT ACCTGGCTTGCGACGCCCTCACCGGCGAGCAGCTGACATTGACGATTCAACAAAGACTGGGCCGCTGA
Upstream 100 bases:
>100_bases GCCAGCTGTGGGCGGAGCCGGACCCAGCCACGCTGGCCGCCCTGCAACAGCTGCATCTGGATAGCGAAGCGCTGCTGGAA GCGCGCGGAGAGAACAAAGC
Downstream 100 bases:
>100_bases AATGACGGGCAAGGTTTACCTGATAGGCGCCGGCCCCGGCGACCTGGACATGCTGACGCTGAAGGCCGCGCGCTGCCTGC AGCTGGCCGACGTGGCGCTG
Product: chelatase protein
Products: ADP; phosphate; Mg-protoporphyrin IX; H+
Alternate protein names: NA
Number of amino acids: Translated: 635; Mature: 634
Protein sequence:
>635_residues MSPIYPFAAIVGQEQLKQALLICAVDPTVGGVLVRGDKGSAKSTAARGLAAVLPPIRRAAGCGYNCEPDHPLPLCPVCSG GARELHDGPVPFINLPLGATEDRVLGSLDFEKALQGGKQAFKPGLLAGAHRGMLYIDEVNLLADHLVDVLLDAAAMGVNT VEREGLAVSHPARVTLLGTMNQEEGDLRPQLLDRFGLMVDVAAPREPGLRAEVVRRRLAFEADPAGFAAQWQTDSEALRE NIAAARALLPHTRLSDQLFHFVSELCCEFEVSSLRADIVLNKAARALAALDGRIDASAEDIRDAARLVLPHRRRRKPFEQ SGLDQDKLERMTRQASTPPPLPQDQGEATQPPPDADGEQEPKPTGHGSEQIFAAAPAGDIARIRVQAPSTGDAAGRRSDG ASRQRGHYVRAEANPQPAQLAVDATLRHAILRDPDHFAVTRADLHDKVRVAKQGNLILLVVDASGSMAARQRMEQVKGTV LSLLEDAYRRRDQVALIAFRGQKAELLLPPCNRVEQAEAALRELPTGGRTPLAHALALAADTLSRQLGGPAPLLVILSDG RANVALDGDGDPWRQALDLAGQLAGAPALVLDTEQDFVRLGRARELAEALGAEYLACDALTGEQLTLTIQQRLGR
Sequences:
>Translated_635_residues MSPIYPFAAIVGQEQLKQALLICAVDPTVGGVLVRGDKGSAKSTAARGLAAVLPPIRRAAGCGYNCEPDHPLPLCPVCSG GARELHDGPVPFINLPLGATEDRVLGSLDFEKALQGGKQAFKPGLLAGAHRGMLYIDEVNLLADHLVDVLLDAAAMGVNT VEREGLAVSHPARVTLLGTMNQEEGDLRPQLLDRFGLMVDVAAPREPGLRAEVVRRRLAFEADPAGFAAQWQTDSEALRE NIAAARALLPHTRLSDQLFHFVSELCCEFEVSSLRADIVLNKAARALAALDGRIDASAEDIRDAARLVLPHRRRRKPFEQ SGLDQDKLERMTRQASTPPPLPQDQGEATQPPPDADGEQEPKPTGHGSEQIFAAAPAGDIARIRVQAPSTGDAAGRRSDG ASRQRGHYVRAEANPQPAQLAVDATLRHAILRDPDHFAVTRADLHDKVRVAKQGNLILLVVDASGSMAARQRMEQVKGTV LSLLEDAYRRRDQVALIAFRGQKAELLLPPCNRVEQAEAALRELPTGGRTPLAHALALAADTLSRQLGGPAPLLVILSDG RANVALDGDGDPWRQALDLAGQLAGAPALVLDTEQDFVRLGRARELAEALGAEYLACDALTGEQLTLTIQQRLGR >Mature_634_residues SPIYPFAAIVGQEQLKQALLICAVDPTVGGVLVRGDKGSAKSTAARGLAAVLPPIRRAAGCGYNCEPDHPLPLCPVCSGG ARELHDGPVPFINLPLGATEDRVLGSLDFEKALQGGKQAFKPGLLAGAHRGMLYIDEVNLLADHLVDVLLDAAAMGVNTV EREGLAVSHPARVTLLGTMNQEEGDLRPQLLDRFGLMVDVAAPREPGLRAEVVRRRLAFEADPAGFAAQWQTDSEALREN IAAARALLPHTRLSDQLFHFVSELCCEFEVSSLRADIVLNKAARALAALDGRIDASAEDIRDAARLVLPHRRRRKPFEQS GLDQDKLERMTRQASTPPPLPQDQGEATQPPPDADGEQEPKPTGHGSEQIFAAAPAGDIARIRVQAPSTGDAAGRRSDGA SRQRGHYVRAEANPQPAQLAVDATLRHAILRDPDHFAVTRADLHDKVRVAKQGNLILLVVDASGSMAARQRMEQVKGTVL SLLEDAYRRRDQVALIAFRGQKAELLLPPCNRVEQAEAALRELPTGGRTPLAHALALAADTLSRQLGGPAPLLVILSDGR ANVALDGDGDPWRQALDLAGQLAGAPALVLDTEQDFVRLGRARELAEALGAEYLACDALTGEQLTLTIQQRLGR
Specific function: Unknown
COG id: COG1239
COG function: function code H; Mg-chelatase subunit ChlI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011704 - InterPro: IPR012804 - InterPro: IPR002035 [H]
Pfam domain/function: PF07728 AAA_5; PF00092 VWA [H]
EC number: 6.6.1.1
Molecular weight: Translated: 67999; Mature: 67868
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPIYPFAAIVGQEQLKQALLICAVDPTVGGVLVRGDKGSAKSTAARGLAAVLPPIRRAA CCCCCHHHHHHCHHHHHHHHEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH GCGYNCEPDHPLPLCPVCSGGARELHDGPVPFINLPLGATEDRVLGSLDFEKALQGGKQA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHCCCCHHHHHHCCHHH FKPGLLAGAHRGMLYIDEVNLLADHLVDVLLDAAAMGVNTVEREGLAVSHPARVTLLGTM HCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEECCCCEEEEEECC NQEEGDLRPQLLDRFGLMVDVAAPREPGLRAEVVRRRLAFEADPAGFAAQWQTDSEALRE CCCCCCCCHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHHH NIAAARALLPHTRLSDQLFHFVSELCCEFEVSSLRADIVLNKAARALAALDGRIDASAED HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH IRDAARLVLPHRRRRKPFEQSGLDQDKLERMTRQASTPPPLPQDQGEATQPPPDADGEQE HHHHHHHHCCHHHHCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PKPTGHGSEQIFAAAPAGDIARIRVQAPSTGDAAGRRSDGASRQRGHYVRAEANPQPAQL CCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCE AVDATLRHAILRDPDHFAVTRADLHDKVRVAKQGNLILLVVDASGSMAARQRMEQVKGTV EHHHHHHHHHHCCCCHHEEEHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHH LSLLEDAYRRRDQVALIAFRGQKAELLLPPCNRVEQAEAALRELPTGGRTPLAHALALAA HHHHHHHHHCCCCEEEEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH DTLSRQLGGPAPLLVILSDGRANVALDGDGDPWRQALDLAGQLAGAPALVLDTEQDFVRL HHHHHHHCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHH GRARELAEALGAEYLACDALTGEQLTLTIQQRLGR HHHHHHHHHHCCCEEEEECCCCCEEEEEHHHHHCC >Mature Secondary Structure SPIYPFAAIVGQEQLKQALLICAVDPTVGGVLVRGDKGSAKSTAARGLAAVLPPIRRAA CCCCHHHHHHCHHHHHHHHEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH GCGYNCEPDHPLPLCPVCSGGARELHDGPVPFINLPLGATEDRVLGSLDFEKALQGGKQA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHCCCCHHHHHHCCHHH FKPGLLAGAHRGMLYIDEVNLLADHLVDVLLDAAAMGVNTVEREGLAVSHPARVTLLGTM HCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEECCCCEEEEEECC NQEEGDLRPQLLDRFGLMVDVAAPREPGLRAEVVRRRLAFEADPAGFAAQWQTDSEALRE CCCCCCCCHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHHH NIAAARALLPHTRLSDQLFHFVSELCCEFEVSSLRADIVLNKAARALAALDGRIDASAED HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH IRDAARLVLPHRRRRKPFEQSGLDQDKLERMTRQASTPPPLPQDQGEATQPPPDADGEQE HHHHHHHHCCHHHHCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PKPTGHGSEQIFAAAPAGDIARIRVQAPSTGDAAGRRSDGASRQRGHYVRAEANPQPAQL CCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCE AVDATLRHAILRDPDHFAVTRADLHDKVRVAKQGNLILLVVDASGSMAARQRMEQVKGTV EHHHHHHHHHHCCCCHHEEEHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHH LSLLEDAYRRRDQVALIAFRGQKAELLLPPCNRVEQAEAALRELPTGGRTPLAHALALAA HHHHHHHHHCCCCEEEEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH DTLSRQLGGPAPLLVILSDGRANVALDGDGDPWRQALDLAGQLAGAPALVLDTEQDFVRL HHHHHHHCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHH GRARELAEALGAEYLACDALTGEQLTLTIQQRLGR HHHHHHHHHHCCCEEEEECCCCCEEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; protoporphyrin IX; Mg2+; H2O
Specific reaction: ATP + protoporphyrin IX + Mg2+ + H2O = ADP + phosphate + Mg-protoporphyrin IX + 2 H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]