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The map label for this gene is 34497000

Identifier: 34497000

GI number: 34497000

Start: 1661486

End: 1663021

Strand: Direct

Name: 34497000

Synonym: CV_1545

Alternate gene names: NA

Gene position: 1661486-1663021 (Clockwise)

Preceding gene: 34496999

Following gene: 34497001

Centisome position: 34.97

GC content: 63.35

Gene sequence:

>1536_bases
ATGAGCGAGGCGGTCTGGGACATCGTTTGCGTCGGCTCTGGCATCGCTGCGCTGACTTATGCGGCGGCCCTGACCGCGCA
GCGCCCGGGTTTGCGGGTTTTGCTGCTTGAGCAGCATACGGTGCCGGGGGGGTACTCCAGCGAGTTCGTGCGCCCCAAGC
AAGGCGCGCGCTTCGATTGCAGCTTGCACAAGCTGTCCGGCATGGGCGAGCAAGGGAACCTGAGGCAGGTGTTTCGCGCG
CTGGGGCTGGAGGAGCGGATCAATCTGCATTTTTCGCCGGTATTGTTCCAGGCGGCCGGGCCGCTATGGCTGGAAGTGTC
GGAATCGCCGGAGCAGGCCTTGGATGGCTTGCTCCAGGCATTCCCCGGCCAGCGCGAGGGCCTGCTGCGGTTTTTCGACG
ACATCGCGGTGCATGGGAAAAACGGCTATCTGCAGTTTGAGATGCTGCAGGGACGATACGAGCCGGATTTCGCCGCGATG
CGGTATGCCCGCAAGCATCTGAAGAACATCACGGTGCGGGATGCATTGCGGCGGATGTTCGACGATCCGCAACTGTGCGA
GCTGTTGGCGCTGCCGTCGATCTATGTCGGTTCATTTCCGGAGCAGTGCAGTTATCTGTACTTCCTGCATGTGGTCTACG
CCAATCTGTACATGCGCAGCGCCTACATGGACGGCGGTTCGCAGCGGTTGTCCAATTTGCTGGTGGAGCAAATTCGGGCG
CGGGGCGGCGAAGTCGTGCTGAACGTCAACGTCGAGCGCATTCTGGTCGACAAGAGCGCCATGCGCGCGACCGGCGTGGC
AACCGACCGGGGCGAGTTTCTGGCGCGGGAGGTTTTGGTCAACGCTTCGCCGGTCTATGCGCTGGAGCAGCTGTTCGAAC
CCATGCCGGAGTTGGATGCCCCTCGGCAGCTCGTATCCCGGATACGGCCAGCCAATGCCACCAGCACGCTTTATTTGGTG
CTGGACGAGGACCCTGCCCAACTGGGGCTGCCACACGCGGAAACCATGCTGTTGGCCGATGATCCGGACGCCGCGTGGCG
CGCGCGCGAGCGCTCGCGCGCCGATCCCATGAGCGAGGCGTTGGCCGAGGAGGCCTATTGGCGGCGCTCGTCTCTGGAAA
TCACCAACTATCACGCGCTGGACGCGAGCGGCGGCAAGGTGGTCATCGTCAATGCGCTGGATGATCCGCGTCATTGGCCG
CGGCGGAAAACGCCCGAATACAGAGCCAAGAAAAAGCGCGGCCAGCAAGCGCTGCTGGAGCGCGTGGGCAGGCACTTTCC
GGATTTGTCGGACCGTATCGTTTACGCGGAACTGTCCAGCCCGCATACCTACCAGCGATACACCAACAATACCGCGGGGT
CCGGCTATGGCGCTCTGGTGGCGCCGGATGCCTCGCCGGCGCTGATCAACCACCGTTTTCCTGTGGCTGGTGTCAGCTTC
CTAAGCGCCTGGGTGGCGGGATCGGGCTACGAGGCCGCAATGGGGTATTCCATGTTCAAGGCCAGCTCGGCGGTCCCCGC
CGCGGCGAGCGTTTGA

Upstream 100 bases:

>100_bases
AAGAAGCGATCGCGCTGGTAAGAGGGTCGGCCAACAACCAGCGTCTGAACAGCGAGCGCTTCGCAGAGCTGGATCAGTGG
TTCGCAGAACTGGGGATTGT

Downstream 100 bases:

>100_bases
ACGACATCAATTGAAGGAGCGGCAATGCAAGACGAAATCATGCAACCATGGGTGTTGGTGACCGGCGGCAGCCGAGGCAT
AGGCAGGGGCCTGGTGTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Carotenoid Isomerase; All-Trans-Retinol; Carotene Isomerase; Phytoene Dehydrogenase; Phytoene Dehydrogenase And Related Proteins; Phytoene Dehydrogenase-Related Protein; Phytoene Dehydrogenase-Like Protein; Carotenoid Cis-Trans Isomerase; Amine Oxidase

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MSEAVWDIVCVGSGIAALTYAAALTAQRPGLRVLLLEQHTVPGGYSSEFVRPKQGARFDCSLHKLSGMGEQGNLRQVFRA
LGLEERINLHFSPVLFQAAGPLWLEVSESPEQALDGLLQAFPGQREGLLRFFDDIAVHGKNGYLQFEMLQGRYEPDFAAM
RYARKHLKNITVRDALRRMFDDPQLCELLALPSIYVGSFPEQCSYLYFLHVVYANLYMRSAYMDGGSQRLSNLLVEQIRA
RGGEVVLNVNVERILVDKSAMRATGVATDRGEFLAREVLVNASPVYALEQLFEPMPELDAPRQLVSRIRPANATSTLYLV
LDEDPAQLGLPHAETMLLADDPDAAWRARERSRADPMSEALAEEAYWRRSSLEITNYHALDASGGKVVIVNALDDPRHWP
RRKTPEYRAKKKRGQQALLERVGRHFPDLSDRIVYAELSSPHTYQRYTNNTAGSGYGALVAPDASPALINHRFPVAGVSF
LSAWVAGSGYEAAMGYSMFKASSAVPAAASV

Sequences:

>Translated_511_residues
MSEAVWDIVCVGSGIAALTYAAALTAQRPGLRVLLLEQHTVPGGYSSEFVRPKQGARFDCSLHKLSGMGEQGNLRQVFRA
LGLEERINLHFSPVLFQAAGPLWLEVSESPEQALDGLLQAFPGQREGLLRFFDDIAVHGKNGYLQFEMLQGRYEPDFAAM
RYARKHLKNITVRDALRRMFDDPQLCELLALPSIYVGSFPEQCSYLYFLHVVYANLYMRSAYMDGGSQRLSNLLVEQIRA
RGGEVVLNVNVERILVDKSAMRATGVATDRGEFLAREVLVNASPVYALEQLFEPMPELDAPRQLVSRIRPANATSTLYLV
LDEDPAQLGLPHAETMLLADDPDAAWRARERSRADPMSEALAEEAYWRRSSLEITNYHALDASGGKVVIVNALDDPRHWP
RRKTPEYRAKKKRGQQALLERVGRHFPDLSDRIVYAELSSPHTYQRYTNNTAGSGYGALVAPDASPALINHRFPVAGVSF
LSAWVAGSGYEAAMGYSMFKASSAVPAAASV
>Mature_510_residues
SEAVWDIVCVGSGIAALTYAAALTAQRPGLRVLLLEQHTVPGGYSSEFVRPKQGARFDCSLHKLSGMGEQGNLRQVFRAL
GLEERINLHFSPVLFQAAGPLWLEVSESPEQALDGLLQAFPGQREGLLRFFDDIAVHGKNGYLQFEMLQGRYEPDFAAMR
YARKHLKNITVRDALRRMFDDPQLCELLALPSIYVGSFPEQCSYLYFLHVVYANLYMRSAYMDGGSQRLSNLLVEQIRAR
GGEVVLNVNVERILVDKSAMRATGVATDRGEFLAREVLVNASPVYALEQLFEPMPELDAPRQLVSRIRPANATSTLYLVL
DEDPAQLGLPHAETMLLADDPDAAWRARERSRADPMSEALAEEAYWRRSSLEITNYHALDASGGKVVIVNALDDPRHWPR
RKTPEYRAKKKRGQQALLERVGRHFPDLSDRIVYAELSSPHTYQRYTNNTAGSGYGALVAPDASPALINHRFPVAGVSFL
SAWVAGSGYEAAMGYSMFKASSAVPAAASV

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56680; Mature: 56549

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAVWDIVCVGSGIAALTYAAALTAQRPGLRVLLLEQHTVPGGYSSEFVRPKQGARFDC
CCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEC
SLHKLSGMGEQGNLRQVFRALGLEERINLHFSPVLFQAAGPLWLEVSESPEQALDGLLQA
CHHHHCCCCCCCCHHHHHHHCCCHHHCCEEECHHHEECCCCEEEEECCCHHHHHHHHHHH
FPGQREGLLRFFDDIAVHGKNGYLQFEMLQGRYEPDFAAMRYARKHLKNITVRDALRRMF
CCCCHHHHHHHHHHHHEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHC
DDPQLCELLALPSIYVGSFPEQCSYLYFLHVVYANLYMRSAYMDGGSQRLSNLLVEQIRA
CCHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RGGEVVLNVNVERILVDKSAMRATGVATDRGEFLAREVLVNASPVYALEQLFEPMPELDA
CCCCEEEEECHHEEEECHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
PRQLVSRIRPANATSTLYLVLDEDPAQLGLPHAETMLLADDPDAAWRARERSRADPMSEA
HHHHHHHCCCCCCCEEEEEEECCCHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHH
LAEEAYWRRSSLEITNYHALDASGGKVVIVNALDDPRHWPRRKTPEYRAKKKRGQQALLE
HHHHHHHHHCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RVGRHFPDLSDRIVYAELSSPHTYQRYTNNTAGSGYGALVAPDASPALINHRFPVAGVSF
HHHHHCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCCEEECCCCCCHHHCCCCCHHHHHH
LSAWVAGSGYEAAMGYSMFKASSAVPAAASV
HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SEAVWDIVCVGSGIAALTYAAALTAQRPGLRVLLLEQHTVPGGYSSEFVRPKQGARFDC
CCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEC
SLHKLSGMGEQGNLRQVFRALGLEERINLHFSPVLFQAAGPLWLEVSESPEQALDGLLQA
CHHHHCCCCCCCCHHHHHHHCCCHHHCCEEECHHHEECCCCEEEEECCCHHHHHHHHHHH
FPGQREGLLRFFDDIAVHGKNGYLQFEMLQGRYEPDFAAMRYARKHLKNITVRDALRRMF
CCCCHHHHHHHHHHHHEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHC
DDPQLCELLALPSIYVGSFPEQCSYLYFLHVVYANLYMRSAYMDGGSQRLSNLLVEQIRA
CCHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RGGEVVLNVNVERILVDKSAMRATGVATDRGEFLAREVLVNASPVYALEQLFEPMPELDA
CCCCEEEEECHHEEEECHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
PRQLVSRIRPANATSTLYLVLDEDPAQLGLPHAETMLLADDPDAAWRARERSRADPMSEA
HHHHHHHCCCCCCCEEEEEEECCCHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHH
LAEEAYWRRSSLEITNYHALDASGGKVVIVNALDDPRHWPRRKTPEYRAKKKRGQQALLE
HHHHHHHHHCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RVGRHFPDLSDRIVYAELSSPHTYQRYTNNTAGSGYGALVAPDASPALINHRFPVAGVSF
HHHHHCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCCEEECCCCCCHHHCCCCCHHHHHH
LSAWVAGSGYEAAMGYSMFKASSAVPAAASV
HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA