| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is fabG [H]
Identifier: 34497001
GI number: 34497001
Start: 1663046
End: 1663792
Strand: Direct
Name: fabG [H]
Synonym: CV_1546
Alternate gene names: 34497001
Gene position: 1663046-1663792 (Clockwise)
Preceding gene: 34497000
Following gene: 34497002
Centisome position: 35.0
GC content: 62.52
Gene sequence:
>747_bases ATGCAAGACGAAATCATGCAACCATGGGTGTTGGTGACCGGCGGCAGCCGAGGCATAGGCAGGGGCCTGGTGTTGGAGCT GGCGAAGGACTACCGGGTGGTTTTCACCTACAAGAACAATGCGGAGCAGGCGCGTGCAGTGGAGGAGTCGGTCCTGAGAA TGGGCGGAGAGGCTTATGCGGTCCAGTGCGACGGCAGCGACCCGGAAGCCGCGAAGCGCTTGGCGACGCAGTGCCTGGAG CGCTTCGGCGCGCCGTACGCCGTCATCAACAACGCCGGCGTGACCCGGGATGGCCTCATGATGTCCATGTCGCTGGAGTC ATGGCGCGACGTGATATCCACGAATCTGGACGCGGTGTTCCATGTCACGCAGGCGTTCCTGCCGGCCATGTGCGGCGAAA AACGGGGTGCGGTGCTGTTGATGTCCTCCGTCACCGCGATCAAGGGCAATATGGGCCAAGCCAACTACGCGGCGACCAAG GCGGCCATGGCGGGGCTGGCCCGCACCTTGGCGCTGGAGACCGCCCGTTTCAAAATCCGGGTCAATGCGATCGCGCCGGG GCTGATCGACACGGATATGGCGGACGATATTCCAGAGAAGGCGCGGCAACAGCTGGAGAAGAGTATTCCATTGCGCCGTT TGGGCACCGTGGGAGAGGTGGCCGGCCTGGCGAAGTACTTATTGTCCGATGCCGCGGCTTACATCACCGGACAAACCATC GTGATAGATGGCGGACTCAGCAGCTGA
Upstream 100 bases:
>100_bases ATCGGGCTACGAGGCCGCAATGGGGTATTCCATGTTCAAGGCCAGCTCGGCGGTCCCCGCCGCGGCGAGCGTTTGAACGA CATCAATTGAAGGAGCGGCA
Downstream 100 bases:
>100_bases GGTGGATACGACGCGGAAGAGCCGCGCCGACAGGAGAGCATCATGACTTATGTTGTTTTAAGCGACTGCATAGGCTGTAA GCATTCGGATTGCGTGGATG
Product: 3-oxoacyl-ACP reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MQDEIMQPWVLVTGGSRGIGRGLVLELAKDYRVVFTYKNNAEQARAVEESVLRMGGEAYAVQCDGSDPEAAKRLATQCLE RFGAPYAVINNAGVTRDGLMMSMSLESWRDVISTNLDAVFHVTQAFLPAMCGEKRGAVLLMSSVTAIKGNMGQANYAATK AAMAGLARTLALETARFKIRVNAIAPGLIDTDMADDIPEKARQQLEKSIPLRRLGTVGEVAGLAKYLLSDAAAYITGQTI VIDGGLSS
Sequences:
>Translated_248_residues MQDEIMQPWVLVTGGSRGIGRGLVLELAKDYRVVFTYKNNAEQARAVEESVLRMGGEAYAVQCDGSDPEAAKRLATQCLE RFGAPYAVINNAGVTRDGLMMSMSLESWRDVISTNLDAVFHVTQAFLPAMCGEKRGAVLLMSSVTAIKGNMGQANYAATK AAMAGLARTLALETARFKIRVNAIAPGLIDTDMADDIPEKARQQLEKSIPLRRLGTVGEVAGLAKYLLSDAAAYITGQTI VIDGGLSS >Mature_248_residues MQDEIMQPWVLVTGGSRGIGRGLVLELAKDYRVVFTYKNNAEQARAVEESVLRMGGEAYAVQCDGSDPEAAKRLATQCLE RFGAPYAVINNAGVTRDGLMMSMSLESWRDVISTNLDAVFHVTQAFLPAMCGEKRGAVLLMSSVTAIKGNMGQANYAATK AAMAGLARTLALETARFKIRVNAIAPGLIDTDMADDIPEKARQQLEKSIPLRRLGTVGEVAGLAKYLLSDAAAYITGQTI VIDGGLSS
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=36.3636363636364, Blast_Score=143, Evalue=1e-34, Organism=Homo sapiens, GI15277342, Length=260, Percent_Identity=35.3846153846154, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI32483357, Length=255, Percent_Identity=31.7647058823529, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI66933014, Length=167, Percent_Identity=34.7305389221557, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI5031737, Length=241, Percent_Identity=30.7053941908714, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI19923817, Length=247, Percent_Identity=29.9595141700405, Blast_Score=98, Evalue=8e-21, Organism=Homo sapiens, GI4504505, Length=211, Percent_Identity=32.7014218009479, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI4503301, Length=204, Percent_Identity=30.8823529411765, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI7705925, Length=242, Percent_Identity=31.8181818181818, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI126723750, Length=258, Percent_Identity=27.5193798449612, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=31.413612565445, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI40807363, Length=194, Percent_Identity=30.9278350515464, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI7657478, Length=189, Percent_Identity=29.6296296296296, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI4758504, Length=269, Percent_Identity=27.1375464684015, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI59889578, Length=221, Percent_Identity=28.5067873303167, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI210032110, Length=211, Percent_Identity=27.0142180094787, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI10190704, Length=242, Percent_Identity=27.6859504132231, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI126723191, Length=189, Percent_Identity=30.1587301587302, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI20149619, Length=202, Percent_Identity=27.7227722772277, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI7706318, Length=193, Percent_Identity=27.4611398963731, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI209862901, Length=191, Percent_Identity=27.7486910994764, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI19923983, Length=191, Percent_Identity=27.7486910994764, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI31542939, Length=199, Percent_Identity=27.1356783919598, Blast_Score=64, Evalue=1e-10, Organism=Escherichia coli, GI1787335, Length=236, Percent_Identity=38.135593220339, Blast_Score=166, Evalue=1e-42, Organism=Escherichia coli, GI87082100, Length=244, Percent_Identity=37.7049180327869, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1788459, Length=239, Percent_Identity=33.0543933054393, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI2367175, Length=243, Percent_Identity=36.2139917695473, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI87082160, Length=240, Percent_Identity=30, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1787905, Length=236, Percent_Identity=30.9322033898305, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1790717, Length=239, Percent_Identity=30.9623430962343, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1789208, Length=238, Percent_Identity=28.5714285714286, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1786812, Length=250, Percent_Identity=28.8, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI2367365, Length=241, Percent_Identity=29.8755186721992, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=29.2682926829268, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1787526, Length=244, Percent_Identity=29.0983606557377, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1786701, Length=203, Percent_Identity=29.064039408867, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1789057, Length=255, Percent_Identity=23.921568627451, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25147288, Length=240, Percent_Identity=36.25, Blast_Score=154, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17555706, Length=239, Percent_Identity=34.7280334728033, Blast_Score=138, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17561402, Length=249, Percent_Identity=32.1285140562249, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17560676, Length=242, Percent_Identity=30.9917355371901, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71994600, Length=254, Percent_Identity=30.3149606299213, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17562910, Length=253, Percent_Identity=30.4347826086957, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17568967, Length=185, Percent_Identity=32.4324324324324, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI115534694, Length=245, Percent_Identity=29.3877551020408, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71994604, Length=255, Percent_Identity=29.0196078431373, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17562904, Length=258, Percent_Identity=27.1317829457364, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17538182, Length=250, Percent_Identity=31.6, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17560150, Length=251, Percent_Identity=28.2868525896414, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17508651, Length=249, Percent_Identity=25.7028112449799, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17564282, Length=195, Percent_Identity=27.1794871794872, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17538480, Length=258, Percent_Identity=27.1317829457364, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17562906, Length=257, Percent_Identity=27.2373540856031, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17563726, Length=255, Percent_Identity=29.8039215686275, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17508895, Length=189, Percent_Identity=24.3386243386243, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17551412, Length=268, Percent_Identity=26.4925373134328, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17562990, Length=251, Percent_Identity=27.4900398406374, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17544670, Length=260, Percent_Identity=25, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17559104, Length=254, Percent_Identity=24.8031496062992, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17562908, Length=255, Percent_Identity=26.6666666666667, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193203117, Length=193, Percent_Identity=27.4611398963731, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193203115, Length=193, Percent_Identity=27.4611398963731, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17538486, Length=258, Percent_Identity=27.1317829457364, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI72000259, Length=254, Percent_Identity=27.5590551181102, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17565030, Length=266, Percent_Identity=28.1954887218045, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17561272, Length=199, Percent_Identity=29.6482412060301, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI193204405, Length=257, Percent_Identity=26.0700389105058, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17560332, Length=256, Percent_Identity=26.171875, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17531453, Length=257, Percent_Identity=25.6809338521401, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17567345, Length=164, Percent_Identity=28.0487804878049, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17536025, Length=249, Percent_Identity=26.9076305220884, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17560220, Length=260, Percent_Identity=24.6153846153846, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=214, Percent_Identity=31.7757009345794, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6324126, Length=185, Percent_Identity=29.7297297297297, Blast_Score=82, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6323882, Length=202, Percent_Identity=25.7425742574257, Blast_Score=65, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6322227, Length=198, Percent_Identity=26.2626262626263, Blast_Score=62, Evalue=6e-11, Organism=Drosophila melanogaster, GI24639444, Length=240, Percent_Identity=37.9166666666667, Blast_Score=152, Evalue=2e-37, Organism=Drosophila melanogaster, GI23397609, Length=242, Percent_Identity=32.2314049586777, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI21355319, Length=241, Percent_Identity=26.9709543568465, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24644339, Length=243, Percent_Identity=29.6296296296296, Blast_Score=101, Evalue=5e-22, Organism=Drosophila melanogaster, GI24643142, Length=241, Percent_Identity=32.7800829875519, Blast_Score=101, Evalue=5e-22, Organism=Drosophila melanogaster, GI28571526, Length=243, Percent_Identity=28.8065843621399, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI21357041, Length=243, Percent_Identity=29.6296296296296, Blast_Score=98, Evalue=4e-21, Organism=Drosophila melanogaster, GI17737361, Length=250, Percent_Identity=30.8, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI18859837, Length=188, Percent_Identity=32.9787234042553, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24640492, Length=212, Percent_Identity=25.9433962264151, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24644337, Length=207, Percent_Identity=29.4685990338164, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI281364892, Length=198, Percent_Identity=29.7979797979798, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24648944, Length=196, Percent_Identity=29.0816326530612, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24581726, Length=203, Percent_Identity=28.0788177339901, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI21356301, Length=228, Percent_Identity=27.1929824561404, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI116007236, Length=203, Percent_Identity=27.0935960591133, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26535; Mature: 26535
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDEIMQPWVLVTGGSRGIGRGLVLELAKDYRVVFTYKNNAEQARAVEESVLRMGGEAYA CCCCCCCCEEEEECCCCCCCHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEE VQCDGSDPEAAKRLATQCLERFGAPYAVINNAGVTRDGLMMSMSLESWRDVISTNLDAVF EEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEECHHHHHHHHHCCHHHHH HVTQAFLPAMCGEKRGAVLLMSSVTAIKGNMGQANYAATKAAMAGLARTLALETARFKIR HHHHHHHHHHCCCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEE VNAIAPGLIDTDMADDIPEKARQQLEKSIPLRRLGTVGEVAGLAKYLLSDAAAYITGQTI EEEECCCCCCCCHHHCCHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHEECCEE VIDGGLSS EEECCCCC >Mature Secondary Structure MQDEIMQPWVLVTGGSRGIGRGLVLELAKDYRVVFTYKNNAEQARAVEESVLRMGGEAYA CCCCCCCCEEEEECCCCCCCHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEE VQCDGSDPEAAKRLATQCLERFGAPYAVINNAGVTRDGLMMSMSLESWRDVISTNLDAVF EEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEECHHHHHHHHHCCHHHHH HVTQAFLPAMCGEKRGAVLLMSSVTAIKGNMGQANYAATKAAMAGLARTLALETARFKIR HHHHHHHHHHCCCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEE VNAIAPGLIDTDMADDIPEKARQQLEKSIPLRRLGTVGEVAGLAKYLLSDAAAYITGQTI EEEECCCCCCCCHHHCCHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHEECCEE VIDGGLSS EEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA