| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is livK [C]
Identifier: 34496994
GI number: 34496994
Start: 1656514
End: 1657737
Strand: Direct
Name: livK [C]
Synonym: CV_1539
Alternate gene names: 34496994
Gene position: 1656514-1657737 (Clockwise)
Preceding gene: 34496993
Following gene: 34496996
Centisome position: 34.87
GC content: 65.85
Gene sequence:
>1224_bases ATGCAAGTATCCAAGCTGTCCACCCTGACCCTGGCGGTCGCCGCCGCCGTCGCCCTGTCCGCCTGCGGCAAGAAGGAAGA AGCCGCTCCGGCCGGCGCCGCATCCGCTCCGGCCCAGGCTAGCGGCGGCAGCGAAATCAAGATCGGTTTCGCCGCCCCGC TGACCGGTCCGCAGTCGCACTACGGCGAGGAATACAAGAATGGCGTGACCCTGGCGATCGAAGACGCCAACGCCGCGAAG CCGACCATCGCCGGCAAGCCGGTCACCTTCGTGCTGGACGCCCAGGACGACCAGGCCGACCCCAAGACCGCCACCCAGCT GGCGCAGAAGTTCGTCGACGAGAAAGTCGCCGGCATCATCGGCCACTTCAACTCCGGCACCGCCATCCCGGCCTCCAAGA TCTACTCCGACGCCGGCATTCCGATGATCGCGATGGCCACCTCGCCGGTGTTCACCGCGCAAGGCTTCAAGAACACCTTC CGCTCGATGACCTCCGACACCCAGCAGGGCAGCGTGATGGGCAAGTTCGCGGTGGAGAAGCTGCACGCGAAGAAGATCGT CATCGTCGACGACCGCACCGCTTACGGCCAGGGCCTGGCGGACGAGTTCGAGAAGGCTGCGCGCGCCGCCGGCGGCGACG TGGTGAAGCGCGAGTTCACCAATGACAAGGCCACCGACTTCACCGCCATCCTGACCTCCATCAAGGGCGCGAACCCGGAC GTGGTGTTCTACGGCGGCGCCGACGCGCAGTCCGCTCCGATGGTCAAGCAGATGAAGCGCCTGGGCCTCAAGGCTCCGTT GATCTCCGGCGAAATGACCAAGACCCCGACCTTCCTGCAGCTGGCTGGCAAGGAAGCCGACGGCACCATCGCCTCGCTGG CCGGCCTGCCGCTGGAGCAGATGCCGGGCGGCAAGGATTACGAAACCCGCTACAAGGCCCGCTTCAAGGCCGACGTGGCG ACTTATTCGCCGTACGGCTACGACGCCACCCGCACGCTGATCCAGGCGATGGAGCAGGCCAATTCGGCAGATCCCAAGGC CTATCTGCCGGTGCTGGCCAAGATCACCCACCAGGGCGTGACTTCCAGCAACTGGACCTACGACGACAAGGGCGACCTGA AGGACGGCGGCATCACCGTCTACAAGGTCCAGAACGGCCAGTGGACCGTGATGGAAACCGTTGGCGGCGGCGCCCCGGGC AAGGATGCTTCGGCGGCCAAGTAA
Upstream 100 bases:
>100_bases AATGCGGCCAGAGTTTTTACTTTAAGAGCAAGACTGGGATCCGGCACAAGCCGGTTATGTAGAAGCGCGAAGTTGAAGCA ACAAGAAGAGGAACGAAGAG
Downstream 100 bases:
>100_bases GACGGTTTTCGTATGTAGGAAACGGCGCGGATCTCCGCGCCGTTTTTGTTTTTGTCGCTGATAAAAGATAAAGCAAATAT CAGTCTAATAAGTAATATTT
Product: amino acid ABC transporter
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MQVSKLSTLTLAVAAAVALSACGKKEEAAPAGAASAPAQASGGSEIKIGFAAPLTGPQSHYGEEYKNGVTLAIEDANAAK PTIAGKPVTFVLDAQDDQADPKTATQLAQKFVDEKVAGIIGHFNSGTAIPASKIYSDAGIPMIAMATSPVFTAQGFKNTF RSMTSDTQQGSVMGKFAVEKLHAKKIVIVDDRTAYGQGLADEFEKAARAAGGDVVKREFTNDKATDFTAILTSIKGANPD VVFYGGADAQSAPMVKQMKRLGLKAPLISGEMTKTPTFLQLAGKEADGTIASLAGLPLEQMPGGKDYETRYKARFKADVA TYSPYGYDATRTLIQAMEQANSADPKAYLPVLAKITHQGVTSSNWTYDDKGDLKDGGITVYKVQNGQWTVMETVGGGAPG KDASAAK
Sequences:
>Translated_407_residues MQVSKLSTLTLAVAAAVALSACGKKEEAAPAGAASAPAQASGGSEIKIGFAAPLTGPQSHYGEEYKNGVTLAIEDANAAK PTIAGKPVTFVLDAQDDQADPKTATQLAQKFVDEKVAGIIGHFNSGTAIPASKIYSDAGIPMIAMATSPVFTAQGFKNTF RSMTSDTQQGSVMGKFAVEKLHAKKIVIVDDRTAYGQGLADEFEKAARAAGGDVVKREFTNDKATDFTAILTSIKGANPD VVFYGGADAQSAPMVKQMKRLGLKAPLISGEMTKTPTFLQLAGKEADGTIASLAGLPLEQMPGGKDYETRYKARFKADVA TYSPYGYDATRTLIQAMEQANSADPKAYLPVLAKITHQGVTSSNWTYDDKGDLKDGGITVYKVQNGQWTVMETVGGGAPG KDASAAK >Mature_407_residues MQVSKLSTLTLAVAAAVALSACGKKEEAAPAGAASAPAQASGGSEIKIGFAAPLTGPQSHYGEEYKNGVTLAIEDANAAK PTIAGKPVTFVLDAQDDQADPKTATQLAQKFVDEKVAGIIGHFNSGTAIPASKIYSDAGIPMIAMATSPVFTAQGFKNTF RSMTSDTQQGSVMGKFAVEKLHAKKIVIVDDRTAYGQGLADEFEKAARAAGGDVVKREFTNDKATDFTAILTSIKGANPD VVFYGGADAQSAPMVKQMKRLGLKAPLISGEMTKTPTFLQLAGKEADGTIASLAGLPLEQMPGGKDYETRYKARFKADVA TYSPYGYDATRTLIQAMEQANSADPKAYLPVLAKITHQGVTSSNWTYDDKGDLKDGGITVYKVQNGQWTVMETVGGGAPG KDASAAK
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=346, Percent_Identity=31.5028901734104, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI48994941, Length=331, Percent_Identity=30.2114803625378, Blast_Score=144, Evalue=1e-35,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 42523; Mature: 42523
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVSKLSTLTLAVAAAVALSACGKKEEAAPAGAASAPAQASGGSEIKIGFAAPLTGPQSH CCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHH YGEEYKNGVTLAIEDANAAKPTIAGKPVTFVLDAQDDQADPKTATQLAQKFVDEKVAGII HHHHHHCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH GHFNSGTAIPASKIYSDAGIPMIAMATSPVFTAQGFKNTFRSMTSDTQQGSVMGKFAVEK HCCCCCCCCCHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHH LHAKKIVIVDDRTAYGQGLADEFEKAARAAGGDVVKREFTNDKATDFTAILTSIKGANPD HCCCEEEEEECCCHHCCCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCC VVFYGGADAQSAPMVKQMKRLGLKAPLISGEMTKTPTFLQLAGKEADGTIASLAGLPLEQ EEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCHHH MPGGKDYETRYKARFKADVATYSPYGYDATRTLIQAMEQANSADPKAYLPVLAKITHQGV CCCCCCHHHHHHHHEEECCEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC TSSNWTYDDKGDLKDGGITVYKVQNGQWTVMETVGGGAPGKDASAAK CCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MQVSKLSTLTLAVAAAVALSACGKKEEAAPAGAASAPAQASGGSEIKIGFAAPLTGPQSH CCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHH YGEEYKNGVTLAIEDANAAKPTIAGKPVTFVLDAQDDQADPKTATQLAQKFVDEKVAGII HHHHHHCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH GHFNSGTAIPASKIYSDAGIPMIAMATSPVFTAQGFKNTFRSMTSDTQQGSVMGKFAVEK HCCCCCCCCCHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHH LHAKKIVIVDDRTAYGQGLADEFEKAARAAGGDVVKREFTNDKATDFTAILTSIKGANPD HCCCEEEEEECCCHHCCCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCC VVFYGGADAQSAPMVKQMKRLGLKAPLISGEMTKTPTFLQLAGKEADGTIASLAGLPLEQ EEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCHHH MPGGKDYETRYKARFKADVATYSPYGYDATRTLIQAMEQANSADPKAYLPVLAKITHQGV CCCCCCHHHHHHHHEEECCEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC TSSNWTYDDKGDLKDGGITVYKVQNGQWTVMETVGGGAPGKDASAAK CCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA