| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496841
Identifier: 34496841
GI number: 34496841
Start: 1463897
End: 1465375
Strand: Direct
Name: 34496841
Synonym: CV_1386
Alternate gene names: NA
Gene position: 1463897-1465375 (Clockwise)
Preceding gene: 34496840
Following gene: 34496842
Centisome position: 30.81
GC content: 68.02
Gene sequence:
>1479_bases ATGGCTGAGCCCGGGGTGTTCCTGATCCATGGATTGGGCGGCACCCAGTACGATCTGGGCTCCATGCACAAACGTCTGAA AAACGCGGGCTTCGTCACCCATGCGCTGACGCTGCCGGGCCACGGCACGCGGCCGGAGGATCTGGCCGGCGTCAGGATGG AAGACTGGCTGGACGCGGCGCGCGCCAAGTACCGCGAGATCGTCGGCCAGCACGAGGTGCTGCACGTGATGGGCATGTGC ATGGGCGCTCTGTTGGCGCTGGAACTGGTCAAGCTCGAGCGCCATGACAAGGGCCGGCTGGTGGCGCTGGCGCCGCCGGT GTACATAGACGGCTGGGCCACGCCCTGGTACCGGGGCCTGCGCCCCTTGCTATACCGGGTGCCGGGTTTGCCCGAGCGGA TGAAGGTGGAGGAAGAGGAGCCTTACGGCATCAAGAACGAGCAGCTGCGCGCCATCGTCAAGGCCAAGTTCGAGCGTGGC GAGAATTTCCACTATGGCTGGGTGCCATTGGCCTGCATCCGCGAAGTGGACCGGCTGCGCGCGGCGGTGATGCGCGGGCT GGACAGGATCGCCTGCCCCACCCTGGTGGTGCATGCGCGCGAGGACGAGCTGACCAGCCTGCGCTCCGCGCACTTTCTGG TTGAGCGCATCGGCAGCGGCAAGCGCGCCGGCCTGGCGCGCATGGTGGTGCTGGAAGACAGCTATCACATGGTGTGCGTG GACAACGACAGGGAAATCGTCGGCAAGCACGTGCTGGAGTTTTTCAACGCCAACGTCGCAGGCGGTTTCGGCATGGGCAT GGTCGATCCGGCGATGGCGCCGGCGGAAATGGCGGCGCTGCTGGCCGCGGCGCGGCGCGCGCTGGAGCAGGGCGACTTCG CCGCCCTGTACCGGCTGGGGATACCGGATTTCGTCTGGCTGCAGCCGGGCCGCAACCGCAGCAGCGGCGCGTTTCCGGGA CGCAAGGGGCTGCGGCGGCTGCAGGGCTGGGCGGGTGAGGGAGCGAGCTTCGCCGCTTTCGGCGCCGCCGTGATCAACGC CGGCATGGCGGTGCAGCCCGCCACGCTGCTGCATCGCGGCCTGGCTTCCCCAGGCGTGCTGGCGCTGCAGCTGCGCAGGG GCAAGCTGCTGGAGGCCCGATGGTTTCCGGACGATCTGGACGCCGAGGATGCCCACTTCGGCGGCGAGCCGCTGCCGGAC GGACCCAGCGAGCAGGAAAAGGCTTTCGAAGCCGCCGCCGCGTTGTCGCGCACGTTGCGCAAGGCGCCGGACAACGCCAC GCTGCTGAACTTGTACGCCTTGTACAAGCAAGGGGCGATGGGCGATGCCACAGGCGAGCGTCCAAGCGTGATGGACATGG TGGGGCGCGCCAAGCACGATGCCTGGATGGCCAGGCGAGGCATGAGCCGGGAGCAGGCGATGGCGGATTACGTGGCCTTG GTGAATCGGCTGAAAGCCGAGGAGAGCCTGGAGGCGTGA
Upstream 100 bases:
>100_bases CCCTTGCGGGTGCGGGAGCGGCTGGCTTGCGTGCGCGGCGCGGACGATTCGGTGGAAATGGTGGTGGGCATGTTGCGGCC GGAGCCTCTGGAGAGCGGCG
Downstream 100 bases:
>100_bases GCGCCATCGATGGCCGGCGCACGGGTTGGCGGCCTTGGAGTGGCTAACAAAATTCCTGATGCGGCGTTGCGCCGACTTGT CGTACTCAAGTACTGCCTGC
Product: esterase
Products: NA
Alternate protein names: Carboxylesterase; Esterase/Lipase; Alpha/Beta Hydrolase Fold; Esterase; Esterase/Lipase-Like Protein; Alpha/Beta Hydrolase; Acylglycerol Lipase; Thermostable Monoacylglycerol Lipase; PGAP1 Family Protein; Esterase/Lipase-Like; Monoacylglycerol Lipase; Alpha/Beta Hydrolase Domain-Containing Protein; Phospholipase/Carboxylesterase; Esterase/Lipase/Thioesterase Protein; Lipase; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MAEPGVFLIHGLGGTQYDLGSMHKRLKNAGFVTHALTLPGHGTRPEDLAGVRMEDWLDAARAKYREIVGQHEVLHVMGMC MGALLALELVKLERHDKGRLVALAPPVYIDGWATPWYRGLRPLLYRVPGLPERMKVEEEEPYGIKNEQLRAIVKAKFERG ENFHYGWVPLACIREVDRLRAAVMRGLDRIACPTLVVHAREDELTSLRSAHFLVERIGSGKRAGLARMVVLEDSYHMVCV DNDREIVGKHVLEFFNANVAGGFGMGMVDPAMAPAEMAALLAAARRALEQGDFAALYRLGIPDFVWLQPGRNRSSGAFPG RKGLRRLQGWAGEGASFAAFGAAVINAGMAVQPATLLHRGLASPGVLALQLRRGKLLEARWFPDDLDAEDAHFGGEPLPD GPSEQEKAFEAAAALSRTLRKAPDNATLLNLYALYKQGAMGDATGERPSVMDMVGRAKHDAWMARRGMSREQAMADYVAL VNRLKAEESLEA
Sequences:
>Translated_492_residues MAEPGVFLIHGLGGTQYDLGSMHKRLKNAGFVTHALTLPGHGTRPEDLAGVRMEDWLDAARAKYREIVGQHEVLHVMGMC MGALLALELVKLERHDKGRLVALAPPVYIDGWATPWYRGLRPLLYRVPGLPERMKVEEEEPYGIKNEQLRAIVKAKFERG ENFHYGWVPLACIREVDRLRAAVMRGLDRIACPTLVVHAREDELTSLRSAHFLVERIGSGKRAGLARMVVLEDSYHMVCV DNDREIVGKHVLEFFNANVAGGFGMGMVDPAMAPAEMAALLAAARRALEQGDFAALYRLGIPDFVWLQPGRNRSSGAFPG RKGLRRLQGWAGEGASFAAFGAAVINAGMAVQPATLLHRGLASPGVLALQLRRGKLLEARWFPDDLDAEDAHFGGEPLPD GPSEQEKAFEAAAALSRTLRKAPDNATLLNLYALYKQGAMGDATGERPSVMDMVGRAKHDAWMARRGMSREQAMADYVAL VNRLKAEESLEA >Mature_491_residues AEPGVFLIHGLGGTQYDLGSMHKRLKNAGFVTHALTLPGHGTRPEDLAGVRMEDWLDAARAKYREIVGQHEVLHVMGMCM GALLALELVKLERHDKGRLVALAPPVYIDGWATPWYRGLRPLLYRVPGLPERMKVEEEEPYGIKNEQLRAIVKAKFERGE NFHYGWVPLACIREVDRLRAAVMRGLDRIACPTLVVHAREDELTSLRSAHFLVERIGSGKRAGLARMVVLEDSYHMVCVD NDREIVGKHVLEFFNANVAGGFGMGMVDPAMAPAEMAALLAAARRALEQGDFAALYRLGIPDFVWLQPGRNRSSGAFPGR KGLRRLQGWAGEGASFAAFGAAVINAGMAVQPATLLHRGLASPGVLALQLRRGKLLEARWFPDDLDAEDAHFGGEPLPDG PSEQEKAFEAAAALSRTLRKAPDNATLLNLYALYKQGAMGDATGERPSVMDMVGRAKHDAWMARRGMSREQAMADYVALV NRLKAEESLEA
Specific function: Unknown
COG id: COG1647
COG function: function code R; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI120433590, Length=82, Percent_Identity=40.2439024390244, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI120433593, Length=79, Percent_Identity=41.7721518987342, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17535521, Length=81, Percent_Identity=46.9135802469136, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17506027, Length=80, Percent_Identity=45, Blast_Score=79, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6321474, Length=81, Percent_Identity=41.9753086419753, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24659809, Length=85, Percent_Identity=40, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI24659814, Length=85, Percent_Identity=40, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54039; Mature: 53908
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPGVFLIHGLGGTQYDLGSMHKRLKNAGFVTHALTLPGHGTRPEDLAGVRMEDWLDAA CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCHHHHHHHH RAKYREIVGQHEVLHVMGMCMGALLALELVKLERHDKGRLVALAPPVYIDGWATPWYRGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEECCCCCHHHHHH RPLLYRVPGLPERMKVEEEEPYGIKNEQLRAIVKAKFERGENFHYGWVPLACIREVDRLR HHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH AAVMRGLDRIACPTLVVHAREDELTSLRSAHFLVERIGSGKRAGLARMVVLEDSYHMVCV HHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEE DNDREIVGKHVLEFFNANVAGGFGMGMVDPAMAPAEMAALLAAARRALEQGDFAALYRLG CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCC IPDFVWLQPGRNRSSGAFPGRKGLRRLQGWAGEGASFAAFGAAVINAGMAVQPATLLHRG CCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHC LASPGVLALQLRRGKLLEARWFPDDLDAEDAHFGGEPLPDGPSEQEKAFEAAAALSRTLR CCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KAPDNATLLNLYALYKQGAMGDATGERPSVMDMVGRAKHDAWMARRGMSREQAMADYVAL HCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VNRLKAEESLEA HHHHHHHHHCCC >Mature Secondary Structure AEPGVFLIHGLGGTQYDLGSMHKRLKNAGFVTHALTLPGHGTRPEDLAGVRMEDWLDAA CCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCHHHHHHHH RAKYREIVGQHEVLHVMGMCMGALLALELVKLERHDKGRLVALAPPVYIDGWATPWYRGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEECCCCCHHHHHH RPLLYRVPGLPERMKVEEEEPYGIKNEQLRAIVKAKFERGENFHYGWVPLACIREVDRLR HHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH AAVMRGLDRIACPTLVVHAREDELTSLRSAHFLVERIGSGKRAGLARMVVLEDSYHMVCV HHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEE DNDREIVGKHVLEFFNANVAGGFGMGMVDPAMAPAEMAALLAAARRALEQGDFAALYRLG CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCC IPDFVWLQPGRNRSSGAFPGRKGLRRLQGWAGEGASFAAFGAAVINAGMAVQPATLLHRG CCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHC LASPGVLALQLRRGKLLEARWFPDDLDAEDAHFGGEPLPDGPSEQEKAFEAAAALSRTLR CCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KAPDNATLLNLYALYKQGAMGDATGERPSVMDMVGRAKHDAWMARRGMSREQAMADYVAL HCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VNRLKAEESLEA HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA