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The map label for this gene is 34496840

Identifier: 34496840

GI number: 34496840

Start: 1462630

End: 1463904

Strand: Direct

Name: 34496840

Synonym: CV_1385

Alternate gene names: NA

Gene position: 1462630-1463904 (Clockwise)

Preceding gene: 34496838

Following gene: 34496841

Centisome position: 30.79

GC content: 69.49

Gene sequence:

>1275_bases
ATGCAGCAGTTAAGAGTGAGTGTTCTGGTTGCCGCGCTGTTTCTCGTCGTCGCCGTGGTGTCCAAGACGCTGGCCAGCTC
CGTCACGGAGACCGTGCCGGTGTGGCTGGGCAGCGGGGTGACTTTTTCCGCGTTGCTGATTTCTCCGCGCTGGCGCTGGC
CGGCCATTCTCGCCGGTGTGTGGCTGGCGTCGGCGATATGGGGGATGTCCGCGCATGGCCTGGGGCTGGCCGGCGCGGCA
GCGTTCGCGGGGATAGAGGTGGTCAGCGGAGCCGTCGGCTGCTGGGTGGCCGGACTGGGGCGCAACGATCCGGATTCCCC
GATCGGCATGGCCTTGCTTCTTTGCGGCGCGGCGCTGGCGTCCTGCCTGGGCGGCGCAATGGCCATGGCGCTGTGGCAGT
GGCAGCGGCCCAGCCTGGATGTGACGCTGGAGGGCGTGGCCTGGGTGTTGTCCACCATGGTCGGCATTCTGCTGGTGACG
CCGGTGGCCACCGCGTTCCGGGGGTTCCGGCTGAAACGGTCCGGCGGGATGACGATGGCCCAGTTCCTGGGCGGCGGCGC
GGCCTTCCTGTTGTTCCTGGGCGCGGTGGCGCTGGTTTTCATCGATCACAGCGCCGCGCGTTACGGCCACGTGGCCGCGA
CCCTGGCTTATCTTCCCATGCCTTTCCTGTTGATCGCCGCGGCGCTGTGGGGGCCGCGCGGCGGCGCGCTGGCGTTGCTG
CTGGGCGGCTTGCTGATCATCGGCCGGACCGCGCAGGGCGGGGGGCCGTTTGCGGTGGACGAGGGCTTCTCCGGCGAGGC
GGTGATCGAGGTTCAGGGCTTCGTCACGATATGGGCCGCGGTGATGATCGCGGTGCGGGCGCTGTCCGGCGCGCGGCGTC
AGGCATTGATCGACGCCCAGTCCTGGCGCCTGCGTTACGAGCGCATCATGCGCGAAGTAGGCGTGGCGACGGTGGAGTAC
GAAGCGGCCAGCGGGCGGGCCACCTGGGGCATGGGGGCGGGCAAGGTGCTGGGGGAGGACGTCGCCCGCATTTCCAGCCT
GGACGAATGGCTCGAGCATATCGCGCCGGACGAACGCGGCCTGGTGGAGGCGACGTGGAGCAGCGTGGCCAGCGGCGAGA
CCTGGGCCAGCGAGCAAAGCTATACCTTGATGCGGACCGATGGCGAGCCCTTGCGGGTGCGGGAGCGGCTGGCTTGCGTG
CGCGGCGCGGACGATTCGGTGGAAATGGTGGTGGGCATGTTGCGGCCGGAGCCTCTGGAGAGCGGCGATGGCTGA

Upstream 100 bases:

>100_bases
GCCGTCGCGTTGCCCGATGCGCTTGCGATCGACGCGCCGCGGCTTGCCGTCCGAGGAGGGCGCTTCCTATGCTGCAAGAA
TCGATGTCAGAGGAATCGCC

Downstream 100 bases:

>100_bases
GCCCGGGGTGTTCCTGATCCATGGATTGGGCGGCACCCAGTACGATCTGGGCTCCATGCACAAACGTCTGAAAAACGCGG
GCTTCGTCACCCATGCGCTG

Product: transmembrane protein

Products: NA

Alternate protein names: PAS/PAC Sensor Protein

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MQQLRVSVLVAALFLVVAVVSKTLASSVTETVPVWLGSGVTFSALLISPRWRWPAILAGVWLASAIWGMSAHGLGLAGAA
AFAGIEVVSGAVGCWVAGLGRNDPDSPIGMALLLCGAALASCLGGAMAMALWQWQRPSLDVTLEGVAWVLSTMVGILLVT
PVATAFRGFRLKRSGGMTMAQFLGGGAAFLLFLGAVALVFIDHSAARYGHVAATLAYLPMPFLLIAAALWGPRGGALALL
LGGLLIIGRTAQGGGPFAVDEGFSGEAVIEVQGFVTIWAAVMIAVRALSGARRQALIDAQSWRLRYERIMREVGVATVEY
EAASGRATWGMGAGKVLGEDVARISSLDEWLEHIAPDERGLVEATWSSVASGETWASEQSYTLMRTDGEPLRVRERLACV
RGADDSVEMVVGMLRPEPLESGDG

Sequences:

>Translated_424_residues
MQQLRVSVLVAALFLVVAVVSKTLASSVTETVPVWLGSGVTFSALLISPRWRWPAILAGVWLASAIWGMSAHGLGLAGAA
AFAGIEVVSGAVGCWVAGLGRNDPDSPIGMALLLCGAALASCLGGAMAMALWQWQRPSLDVTLEGVAWVLSTMVGILLVT
PVATAFRGFRLKRSGGMTMAQFLGGGAAFLLFLGAVALVFIDHSAARYGHVAATLAYLPMPFLLIAAALWGPRGGALALL
LGGLLIIGRTAQGGGPFAVDEGFSGEAVIEVQGFVTIWAAVMIAVRALSGARRQALIDAQSWRLRYERIMREVGVATVEY
EAASGRATWGMGAGKVLGEDVARISSLDEWLEHIAPDERGLVEATWSSVASGETWASEQSYTLMRTDGEPLRVRERLACV
RGADDSVEMVVGMLRPEPLESGDG
>Mature_424_residues
MQQLRVSVLVAALFLVVAVVSKTLASSVTETVPVWLGSGVTFSALLISPRWRWPAILAGVWLASAIWGMSAHGLGLAGAA
AFAGIEVVSGAVGCWVAGLGRNDPDSPIGMALLLCGAALASCLGGAMAMALWQWQRPSLDVTLEGVAWVLSTMVGILLVT
PVATAFRGFRLKRSGGMTMAQFLGGGAAFLLFLGAVALVFIDHSAARYGHVAATLAYLPMPFLLIAAALWGPRGGALALL
LGGLLIIGRTAQGGGPFAVDEGFSGEAVIEVQGFVTIWAAVMIAVRALSGARRQALIDAQSWRLRYERIMREVGVATVEY
EAASGRATWGMGAGKVLGEDVARISSLDEWLEHIAPDERGLVEATWSSVASGETWASEQSYTLMRTDGEPLRVRERLACV
RGADDSVEMVVGMLRPEPLESGDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44491; Mature: 44491

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQLRVSVLVAALFLVVAVVSKTLASSVTETVPVWLGSGVTFSALLISPRWRWPAILAGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHH
WLASAIWGMSAHGLGLAGAAAFAGIEVVSGAVGCWVAGLGRNDPDSPIGMALLLCGAALA
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
SCLGGAMAMALWQWQRPSLDVTLEGVAWVLSTMVGILLVTPVATAFRGFRLKRSGGMTMA
HHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHH
QFLGGGAAFLLFLGAVALVFIDHSAARYGHVAATLAYLPMPFLLIAAALWGPRGGALALL
HHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LGGLLIIGRTAQGGGPFAVDEGFSGEAVIEVQGFVTIWAAVMIAVRALSGARRQALIDAQ
HHHHHEEEECCCCCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWRLRYERIMREVGVATVEYEAASGRATWGMGAGKVLGEDVARISSLDEWLEHIAPDERG
HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
LVEATWSSVASGETWASEQSYTLMRTDGEPLRVRERLACVRGADDSVEMVVGMLRPEPLE
CHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
SGDG
CCCC
>Mature Secondary Structure
MQQLRVSVLVAALFLVVAVVSKTLASSVTETVPVWLGSGVTFSALLISPRWRWPAILAGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHH
WLASAIWGMSAHGLGLAGAAAFAGIEVVSGAVGCWVAGLGRNDPDSPIGMALLLCGAALA
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
SCLGGAMAMALWQWQRPSLDVTLEGVAWVLSTMVGILLVTPVATAFRGFRLKRSGGMTMA
HHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHH
QFLGGGAAFLLFLGAVALVFIDHSAARYGHVAATLAYLPMPFLLIAAALWGPRGGALALL
HHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LGGLLIIGRTAQGGGPFAVDEGFSGEAVIEVQGFVTIWAAVMIAVRALSGARRQALIDAQ
HHHHHEEEECCCCCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWRLRYERIMREVGVATVEYEAASGRATWGMGAGKVLGEDVARISSLDEWLEHIAPDERG
HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
LVEATWSSVASGETWASEQSYTLMRTDGEPLRVRERLACVRGADDSVEMVVGMLRPEPLE
CHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
SGDG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA