| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496838
Identifier: 34496838
GI number: 34496838
Start: 1458879
End: 1461128
Strand: Direct
Name: 34496838
Synonym: CV_1383
Alternate gene names: NA
Gene position: 1458879-1461128 (Clockwise)
Preceding gene: 34496837
Following gene: 34496840
Centisome position: 30.71
GC content: 67.24
Gene sequence:
>2250_bases ATGACGCGTCTGATCAAAATATTGCCGCTGGCGGCGTGGGGGATATCCCTGCCGGCCTGGGCTGGGCTGGTGTTGCAGAA CCCTGAATGGAAAGTGGAGCTGGAACCGGCCACGCTGGCGCTGAAGGTGACGCCGGCGGGCGAGCCGGCGCGGCGGGTGT CCGACGGCGTGCCGGCGCGTAAGGTGTCCGCGCTGCGCCAGGACGATCAGTCAGCCGACTGGCAATGGGACGACGGCCGT TACCGCTGGCAGGCCAGGCTGCAAGGCCGGGACCTGACGCTGATCCTGAACGCCAAAGCGCCGGGCAGGGTGGAGCTGCT GCGCCAGCCGGCGGCCGCGATGGGCAAGGGCCTGCTGCTGCCCCTGGCCGAGGGCAGCTACATCCCGGCGGGCAGCAAGC TGTGGCGCGATTTCCTGCCCGGCTTCGCCGGCGACGGCCTGGACACCTCGGAAAACCTCAGCCTGCCGCTGTGGGGCATG GACTATGGCCGCCGCAGCCTGCACTGGCTGCTGCTGGAGCCGTTCAACAATCAATTGACCATCCGCGCCGACGGTTCGAA TCTGGCACTTGGCCTGAGCCACGAATTCAACCCGCTGAATCAGCAGCGGCCGATGACGCTGCTGCTGCGGCTGGCCGACG ACAATCTGCTGGCCGGCGCGCAACGCTATCGGCAATGGCTGATCGAGCAAGGCCGTTATCAAACGCTGGCCGACAAGATC CAGGCGCAGCCTGACACCGCCAAGCTGATCGGCGCCAGCCACGTCTACCTGTGGGGCAATAATCTGCTGGATGTGTCCGA CGTGCGCGATTGGCCCGCCTTTATCAAGCTGCTGCGTGGCCCGGACCCGCTGGCGGCCAAGCTGCGCGGCCGTTTCGACG CCGAGGGCGGCAAGGTTTTGCGCCAGGCCGGCGCCAAGCCGGACCATTACCAGCAGCGCGCGCTGATGGAGGCCGTCAAC CAGGCGCTGACCGCCGAGGCCCGCGCCGGCTGGCTGAGCAAGAAGCCGGACTGGGAGCGGATGGCCGCGCCTTATCAGCG GCTGCGCGCGCTGGCGGAGCGGCTGTTCGGCCCGGCATTGCGGCCGGACGCGTCGCGCTGGGGCGGCGGGCTGTCGCGCA AGACCATCACCGCCTTGCAGGCGGCCGGACTCAAGCGGCTGTGGCTGGGCGCGGACAACTGGGAGGGCGGGCTGTGGCAG CCGCAGGCGGTGAAGGCCGGCGTGGATGCCGGTTATCTGATGACCGCCTACGACTCCTACGAGACCGCGCTGCAGCTGGG TTACCGCGAAGACTGGCTCACCGCCCAGCAGGGCGAGGCTATCTACCGCCAATGCGGCGTCACGCTGGCCAGCGGCAAGA AAAAGGCGGGCTTCCAGCAGTCCGGCTACTACACCAACCCGGACTGCGTGCGCGACACCCTGAAACAGCGCACCCGCGCC TTGCATGCCGCCACCGGCTTCAACAGCTGGTTTCTGGACGCCTACGCCACCGGCATGGTGTTCGACGACTACACGCCTGG CCGCCAGACCGGCAAGGCGGAGATGGCGGCCGGCTATGAAAAGTCTATGCAATGGGTGGCGGACGCCTATCGGCTGCCCG TGGGGTCGGAAATGGGAAATGCCGCCACCAGCCGAGGCATCGCCTTCGCCCACGGCATGCAGGCGCCGGTGATGGGCTGG GGCGACGCCGATCTGCAGAAAAACAAGCAGTCGCCGTACTTTCTGGGCCGCTGGTATCCGTCAGACCAGCCGGAAACTTT CTTCAAGAAAGTGCCGCTGAAGCAGCCGTACCGCGATCTTTACTTCAGCGCGCCATACCGCTTGCCGCTGTACCAGGCGG CCTTCCATGGATCGGTGATCACCACCAACCACTGGCTGTACGACAACCTGAAATTCAGCAATGCCTACGCCGACAACCTG CTGGCGCAATGGCTGTACAACGTGCCGCCGCTGTTCCACCTGTCCGCCGCCAGCCTCAGGGCCCGCCTGCCGCAGCTGCA ATGCGCCGACCGCGCCTTCCGCCCCTTGCACGAGCAACTGGCCACCCAGGCGCTCACCGGCTTTGCCTGGTTGAACGCCG AGCATACGCTGCAGCAAACCCGTTTCGCCGACGGCAGCCGGCTCACCGCCAACTTCGGCCCCGCGCCGGTCCGCTACGAT AAGCAAACCCTGCCGCCGCAAAGCCTGCTGGCCGAGCTGGCCGGCCAGCCGCCCAGGCTGCTGCCAGTGGCGGATTGCGC TGGCAAGTAA
Upstream 100 bases:
>100_bases GGCCGCGCCCTTGAGCCAGTTCTGACATTATCCTGACAATTGCCTGTTCCTTTTGCGCTGCAATGCGGTCTATCGAAATG ACCGATTTGCAGGAGAGGGC
Downstream 100 bases:
>100_bases GCGGCGGCGATAATGCCGATGTCGTTTTGCCGGTCGTGGCGCGGCGGTTTCCCATGGCCGGCGAGCGGCATTGCCGAGCG GCATTGCCGAGCGATCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Chaperonin GroEL
Number of amino acids: Translated: 749; Mature: 748
Protein sequence:
>749_residues MTRLIKILPLAAWGISLPAWAGLVLQNPEWKVELEPATLALKVTPAGEPARRVSDGVPARKVSALRQDDQSADWQWDDGR YRWQARLQGRDLTLILNAKAPGRVELLRQPAAAMGKGLLLPLAEGSYIPAGSKLWRDFLPGFAGDGLDTSENLSLPLWGM DYGRRSLHWLLLEPFNNQLTIRADGSNLALGLSHEFNPLNQQRPMTLLLRLADDNLLAGAQRYRQWLIEQGRYQTLADKI QAQPDTAKLIGASHVYLWGNNLLDVSDVRDWPAFIKLLRGPDPLAAKLRGRFDAEGGKVLRQAGAKPDHYQQRALMEAVN QALTAEARAGWLSKKPDWERMAAPYQRLRALAERLFGPALRPDASRWGGGLSRKTITALQAAGLKRLWLGADNWEGGLWQ PQAVKAGVDAGYLMTAYDSYETALQLGYREDWLTAQQGEAIYRQCGVTLASGKKKAGFQQSGYYTNPDCVRDTLKQRTRA LHAATGFNSWFLDAYATGMVFDDYTPGRQTGKAEMAAGYEKSMQWVADAYRLPVGSEMGNAATSRGIAFAHGMQAPVMGW GDADLQKNKQSPYFLGRWYPSDQPETFFKKVPLKQPYRDLYFSAPYRLPLYQAAFHGSVITTNHWLYDNLKFSNAYADNL LAQWLYNVPPLFHLSAASLRARLPQLQCADRAFRPLHEQLATQALTGFAWLNAEHTLQQTRFADGSRLTANFGPAPVRYD KQTLPPQSLLAELAGQPPRLLPVADCAGK
Sequences:
>Translated_749_residues MTRLIKILPLAAWGISLPAWAGLVLQNPEWKVELEPATLALKVTPAGEPARRVSDGVPARKVSALRQDDQSADWQWDDGR YRWQARLQGRDLTLILNAKAPGRVELLRQPAAAMGKGLLLPLAEGSYIPAGSKLWRDFLPGFAGDGLDTSENLSLPLWGM DYGRRSLHWLLLEPFNNQLTIRADGSNLALGLSHEFNPLNQQRPMTLLLRLADDNLLAGAQRYRQWLIEQGRYQTLADKI QAQPDTAKLIGASHVYLWGNNLLDVSDVRDWPAFIKLLRGPDPLAAKLRGRFDAEGGKVLRQAGAKPDHYQQRALMEAVN QALTAEARAGWLSKKPDWERMAAPYQRLRALAERLFGPALRPDASRWGGGLSRKTITALQAAGLKRLWLGADNWEGGLWQ PQAVKAGVDAGYLMTAYDSYETALQLGYREDWLTAQQGEAIYRQCGVTLASGKKKAGFQQSGYYTNPDCVRDTLKQRTRA LHAATGFNSWFLDAYATGMVFDDYTPGRQTGKAEMAAGYEKSMQWVADAYRLPVGSEMGNAATSRGIAFAHGMQAPVMGW GDADLQKNKQSPYFLGRWYPSDQPETFFKKVPLKQPYRDLYFSAPYRLPLYQAAFHGSVITTNHWLYDNLKFSNAYADNL LAQWLYNVPPLFHLSAASLRARLPQLQCADRAFRPLHEQLATQALTGFAWLNAEHTLQQTRFADGSRLTANFGPAPVRYD KQTLPPQSLLAELAGQPPRLLPVADCAGK >Mature_748_residues TRLIKILPLAAWGISLPAWAGLVLQNPEWKVELEPATLALKVTPAGEPARRVSDGVPARKVSALRQDDQSADWQWDDGRY RWQARLQGRDLTLILNAKAPGRVELLRQPAAAMGKGLLLPLAEGSYIPAGSKLWRDFLPGFAGDGLDTSENLSLPLWGMD YGRRSLHWLLLEPFNNQLTIRADGSNLALGLSHEFNPLNQQRPMTLLLRLADDNLLAGAQRYRQWLIEQGRYQTLADKIQ AQPDTAKLIGASHVYLWGNNLLDVSDVRDWPAFIKLLRGPDPLAAKLRGRFDAEGGKVLRQAGAKPDHYQQRALMEAVNQ ALTAEARAGWLSKKPDWERMAAPYQRLRALAERLFGPALRPDASRWGGGLSRKTITALQAAGLKRLWLGADNWEGGLWQP QAVKAGVDAGYLMTAYDSYETALQLGYREDWLTAQQGEAIYRQCGVTLASGKKKAGFQQSGYYTNPDCVRDTLKQRTRAL HAATGFNSWFLDAYATGMVFDDYTPGRQTGKAEMAAGYEKSMQWVADAYRLPVGSEMGNAATSRGIAFAHGMQAPVMGWG DADLQKNKQSPYFLGRWYPSDQPETFFKKVPLKQPYRDLYFSAPYRLPLYQAAFHGSVITTNHWLYDNLKFSNAYADNLL AQWLYNVPPLFHLSAASLRARLPQLQCADRAFRPLHEQLATQALTGFAWLNAEHTLQQTRFADGSRLTANFGPAPVRYDK QTLPPQSLLAELAGQPPRLLPVADCAGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83470; Mature: 83339
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLIKILPLAAWGISLPAWAGLVLQNPEWKVELEPATLALKVTPAGEPARRVSDGVPAR CCCHHHHHHHHHHCCCCHHHCCEEEECCCEEEEECCEEEEEEECCCCCHHHHHHCCCCHH KVSALRQDDQSADWQWDDGRYRWQARLQGRDLTLILNAKAPGRVELLRQPAAAMGKGLLL HHHHHHCCCCCCCCEECCCCEEEEEEECCCCEEEEEECCCCCHHHHHHCCHHHHCCCEEE PLAEGSYIPAGSKLWRDFLPGFAGDGLDTSENLSLPLWGMDYGRRSLHWLLLEPFNNQLT EECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCEEE IRADGSNLALGLSHEFNPLNQQRPMTLLLRLADDNLLAGAQRYRQWLIEQGRYQTLADKI EEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHH QAQPDTAKLIGASHVYLWGNNLLDVSDVRDWPAFIKLLRGPDPLAAKLRGRFDAEGGKVL HCCCCHHHHCCCCEEEEECCCEEEHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHH RQAGAKPDHYQQRALMEAVNQALTAEARAGWLSKKPDWERMAAPYQRLRALAERLFGPAL HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC RPDASRWGGGLSRKTITALQAAGLKRLWLGADNWEGGLWQPQAVKAGVDAGYLMTAYDSY CCCHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHCCCCCCEEEEEHHHH ETALQLGYREDWLTAQQGEAIYRQCGVTLASGKKKAGFQQSGYYTNPDCVRDTLKQRTRA HHHHHCCCCHHCCCHHCCHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LHAATGFNSWFLDAYATGMVFDDYTPGRQTGKAEMAAGYEKSMQWVADAYRLPVGSEMGN HHHHCCCCHHHHHHHHCCEEEECCCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCCCCCC AATSRGIAFAHGMQAPVMGWGDADLQKNKQSPYFLGRWYPSDQPETFFKKVPLKQPYRDL HHHHCCEEEECCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCHHHHHHCCCCCCHHHH YFSAPYRLPLYQAAFHGSVITTNHWLYDNLKFSNAYADNLLAQWLYNVPPLFHLSAASLR HCCCCCCCCHHHHHHCCCEEEECCEEECCCEECHHHHHHHHHHHHHCCCCCEEECHHHHH ARLPQLQCADRAFRPLHEQLATQALTGFAWLNAEHTLQQTRFADGSRLTANFGPAPVRYD HHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHCCCCCEEEECCCCCCCCCC KQTLPPQSLLAELAGQPPRLLPVADCAGK CCCCCHHHHHHHHCCCCCCEEECCCCCCC >Mature Secondary Structure TRLIKILPLAAWGISLPAWAGLVLQNPEWKVELEPATLALKVTPAGEPARRVSDGVPAR CCHHHHHHHHHHCCCCHHHCCEEEECCCEEEEECCEEEEEEECCCCCHHHHHHCCCCHH KVSALRQDDQSADWQWDDGRYRWQARLQGRDLTLILNAKAPGRVELLRQPAAAMGKGLLL HHHHHHCCCCCCCCEECCCCEEEEEEECCCCEEEEEECCCCCHHHHHHCCHHHHCCCEEE PLAEGSYIPAGSKLWRDFLPGFAGDGLDTSENLSLPLWGMDYGRRSLHWLLLEPFNNQLT EECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCEEE IRADGSNLALGLSHEFNPLNQQRPMTLLLRLADDNLLAGAQRYRQWLIEQGRYQTLADKI EEECCCCEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHH QAQPDTAKLIGASHVYLWGNNLLDVSDVRDWPAFIKLLRGPDPLAAKLRGRFDAEGGKVL HCCCCHHHHCCCCEEEEECCCEEEHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHH RQAGAKPDHYQQRALMEAVNQALTAEARAGWLSKKPDWERMAAPYQRLRALAERLFGPAL HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC RPDASRWGGGLSRKTITALQAAGLKRLWLGADNWEGGLWQPQAVKAGVDAGYLMTAYDSY CCCHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHCCCCCCEEEEEHHHH ETALQLGYREDWLTAQQGEAIYRQCGVTLASGKKKAGFQQSGYYTNPDCVRDTLKQRTRA HHHHHCCCCHHCCCHHCCHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LHAATGFNSWFLDAYATGMVFDDYTPGRQTGKAEMAAGYEKSMQWVADAYRLPVGSEMGN HHHHCCCCHHHHHHHHCCEEEECCCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCCCCCC AATSRGIAFAHGMQAPVMGWGDADLQKNKQSPYFLGRWYPSDQPETFFKKVPLKQPYRDL HHHHCCEEEECCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCHHHHHHCCCCCCHHHH YFSAPYRLPLYQAAFHGSVITTNHWLYDNLKFSNAYADNLLAQWLYNVPPLFHLSAASLR HCCCCCCCCHHHHHHCCCEEEECCEEECCCEECHHHHHHHHHHHHHCCCCCEEECHHHHH ARLPQLQCADRAFRPLHEQLATQALTGFAWLNAEHTLQQTRFADGSRLTANFGPAPVRYD HHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHCCCCCEEEECCCCCCCCCC KQTLPPQSLLAELAGQPPRLLPVADCAGK CCCCCHHHHHHHHCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA