| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496814
Identifier: 34496814
GI number: 34496814
Start: 1430988
End: 1431623
Strand: Reverse
Name: 34496814
Synonym: CV_1359
Alternate gene names: NA
Gene position: 1431623-1430988 (Counterclockwise)
Preceding gene: 34496815
Following gene: 34496802
Centisome position: 30.13
GC content: 64.31
Gene sequence:
>636_bases ATGTTTGCGCACAGCGGGGCCGCGGCGCAGGCTTGTCATGGCGTATGCGCGGCCCCTGGAGTGTTCATGCAAGCCTTCCT GATCTCCACCGGCGTGGTGGCTCTGGCCGAAATCGGCGACAAAACCCAATTGCTGGCTCTGTTGCTGGCCTCCCGCTTCA AGAAACCCGCCCCCATCATCCTCGGCATTTTCGTGGCGACGCTGGTCAACCATTTCGCCGCCGCCGCCGTCGGCCAATGG CTGATGGCCAAAGTCGGACCCGACATCATGCGCTGGGGTCTGGGCTTGTCCTTCGTCGCGATGGCCGCCTGGATGCTGAT ACCCGACAAGCTGGACGACGGCGAGGCGCTGCGCGAACGCTTCGGCATTTTCGGCACCACCGTAATCGCCTTCTTCATCG CAGAAATGGGCGACAAGACCCAGATCGCCACCGTGGCGCTGTCCGCGCGCTTCCCCGAACAGCTTTACATGGTGGTGGCC GGCACCACGCTGGGCATGATGATCGCCAACGTGCCGGCAGTGCTGCTGGGCGAGGTGGCCGCCAAGAAACTGCCGCAGAA GCTGATGCACGGCATCGCGGCCGCGCTGTTCGTCGGCCTGGGCATCGCCACGCTGATGACGCCGCTCTCCCTGTAA
Upstream 100 bases:
>100_bases GGGGGAGTAGCCTCGGCGCGCGACAGCGCCGGCACCGGTCAACATGCTTGGCGTTCGCCATGGCCGCTGCGACGATCTTC CGTTTGGCAAGACCCATGAC
Downstream 100 bases:
>100_bases GCCCGCATGGAAAAGGGAGGCCGCGGCCTCCCTTTTTCTTTTCATTCCACCGAACTCAATCCCGCGCCAGCAACGCGTGC GGGTCGAAACCCACGCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MFAHSGAAAQACHGVCAAPGVFMQAFLISTGVVALAEIGDKTQLLALLLASRFKKPAPIILGIFVATLVNHFAAAAVGQW LMAKVGPDIMRWGLGLSFVAMAAWMLIPDKLDDGEALRERFGIFGTTVIAFFIAEMGDKTQIATVALSARFPEQLYMVVA GTTLGMMIANVPAVLLGEVAAKKLPQKLMHGIAAALFVGLGIATLMTPLSL
Sequences:
>Translated_211_residues MFAHSGAAAQACHGVCAAPGVFMQAFLISTGVVALAEIGDKTQLLALLLASRFKKPAPIILGIFVATLVNHFAAAAVGQW LMAKVGPDIMRWGLGLSFVAMAAWMLIPDKLDDGEALRERFGIFGTTVIAFFIAEMGDKTQIATVALSARFPEQLYMVVA GTTLGMMIANVPAVLLGEVAAKKLPQKLMHGIAAALFVGLGIATLMTPLSL >Mature_211_residues MFAHSGAAAQACHGVCAAPGVFMQAFLISTGVVALAEIGDKTQLLALLLASRFKKPAPIILGIFVATLVNHFAAAAVGQW LMAKVGPDIMRWGLGLSFVAMAAWMLIPDKLDDGEALRERFGIFGTTVIAFFIAEMGDKTQIATVALSARFPEQLYMVVA GTTLGMMIANVPAVLLGEVAAKKLPQKLMHGIAAALFVGLGIATLMTPLSL
Specific function: Unknown
COG id: COG2119
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22112; Mature: 22112
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAHSGAAAQACHGVCAAPGVFMQAFLISTGVVALAEIGDKTQLLALLLASRFKKPAPII CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHH LGIFVATLVNHFAAAAVGQWLMAKVGPDIMRWGLGLSFVAMAAWMLIPDKLDDGEALRER HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHH FGIFGTTVIAFFIAEMGDKTQIATVALSARFPEQLYMVVAGTTLGMMIANVPAVLLGEVA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKKLPQKLMHGIAAALFVGLGIATLMTPLSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFAHSGAAAQACHGVCAAPGVFMQAFLISTGVVALAEIGDKTQLLALLLASRFKKPAPII CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHH LGIFVATLVNHFAAAAVGQWLMAKVGPDIMRWGLGLSFVAMAAWMLIPDKLDDGEALRER HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHH FGIFGTTVIAFFIAEMGDKTQIATVALSARFPEQLYMVVAGTTLGMMIANVPAVLLGEVA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKKLPQKLMHGIAAALFVGLGIATLMTPLSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA