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The map label for this gene is yvaQ [H]

Identifier: 34496783

GI number: 34496783

Start: 1397063

End: 1398661

Strand: Reverse

Name: yvaQ [H]

Synonym: CV_1328

Alternate gene names: 34496783

Gene position: 1398661-1397063 (Counterclockwise)

Preceding gene: 34496784

Following gene: 34496782

Centisome position: 29.44

GC content: 66.54

Gene sequence:

>1599_bases
CTGCTGGGGGGCTTCTCGCTGCTGATCCTTCTGCTCTGCGCCGTGGTCCTGATCGCCTACAACAAGCTGCAGACCATCCA
GAACAACATCACCGAGATCAAGGAAGACCGCTATCCCAAGATCGTGCTGTCGCAGCGCATCGCGCTGAATCTGCTCTACA
TCAGCCGCGGCGTGCGCGACGGCGTGCTCGCCCGCGATCCGCAGAAAGTGGAGCAGCAGATCCGCAATGTGGAAGTCCTG
CGCGCCAACAACCGGGCCGATCTGGACAAGATGGAGCCCATGCTGTCCACTCCGGAAGGCCGCGCGCTGTTCGCCAAGAT
ACGCGCGGCGCAGGACAGCCAGCGCCCGCTGTTCGAACCGCTGTACGGCCTGATGCGCAGCCACCAGACCGACGCCGCGC
GCGACATGCTGGAAAACCAGTTCGCGCCGACCAACAACGCCTTCATCTCCGCCCTGCTGTCGCTGCGCGACCGCCAGCAG
AGCCGCCTGGACAAGTCGATGCAAGAGGCGATGGACTCCAGCCAACAGGCGGTGGCCATCCTGCTGGGCACCGCGCTGGC
CTCGCTGCTGCTGGCGATGGCGGTGGCGCTGATCATCTCCAACCTGATCACCTCGCCGCTGCGCCGCTCGGCCGACCTGG
TGCACCAGATCAAGCAGGGCGACCTGTCAGGCCTCAGCGAGCCGATTCCTCCGGCGCGGGACGAGGCGATGCTGATCGCG
CGCGACATCCAGGAAATGCGCGAGGGCCTGCGGCAGATGGTGCAGAGCATCCAGGACAACGCCCACCAGGTGTCGGACTC
CGCGCGCGCGCTGTCCGGCATGGCGCAGCAGGTGGCCAACGGCGCCCAGACCCAGGCCGAGGCCACCACCTCCGCCGCCG
CGTCCATCGAGCAGCTGACGGTCAGCATCAACCAGGTGGCGGACAATTCGAGCGAGGCGTCGGAACAGGCCCAGGCGGCC
GGCCAACTGGCCAACCGCGGCGGCCACGAAGTGCTGGAATCGGTGGGCAAGATACGCTTCGTCACCACGTCCGTCGACGA
AACCGCCAGGCAGATGAATAGCCTGACCAAGGAAGTGCAGCAGATCGGCAATATCGTCACCGTGATCCGGGACGTCGCGG
ACCAGACCAACCTCCTGGCGCTGAACGCGGCGATCGAGGCGGCGCGCGCCGGCGAAACCGGCCGCGGCTTCGCCGTGGTG
GCCGACGAGGTGAGGAAGCTGGCCGAGCGCACCACCACCTCGGCCCAGGAAATCACCAAGATGATAGGGTCGATCCAGCA
GGGCGTCGGCCAGGTGGTGAGCAGCATGGGCCAAAGCCTGGACTGCGTGGAGGGCGTGTCCGGCACCGCCGAGCAGGCCT
CCAACTCGATGCGGGAGATAGAAACCAGCGCCGACACCATCATGCGCACGATACACAGCATCACCGGCGCGCTGACCGAA
CAGCGCAGCACCAGCCTGAGCCTGGCGCAGGACATGGAGAAGGTGTCGCGGATGGCGGAGGAGAACAACGCCACCGTGCA
GGAGCTGGCCACCACCTCCAGCCAGCTGAACGCGCTGTCGGCCAATCTGCAGAGCGTGGCCACCCGCTTCCGGCTGTGA

Upstream 100 bases:

>100_bases
TGAATTTCTACTAGCCGATGAACTAGAACGAATTGATACGCAAATTCGACATACCTGCCGGGAGGCGCGCATGCTCCACC
AATTCACCGTCCGACAGAAG

Downstream 100 bases:

>100_bases
CGGCCAGCCTGGCCGCCCCGGCCGCGCCCCTTGCCGGCGCGGCCGTTTTCTTGCGCGTCCGGACGCCATGAGCGGACGCG
CGACAAGCGGCCAACAACAT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MLGGFSLLILLLCAVVLIAYNKLQTIQNNITEIKEDRYPKIVLSQRIALNLLYISRGVRDGVLARDPQKVEQQIRNVEVL
RANNRADLDKMEPMLSTPEGRALFAKIRAAQDSQRPLFEPLYGLMRSHQTDAARDMLENQFAPTNNAFISALLSLRDRQQ
SRLDKSMQEAMDSSQQAVAILLGTALASLLLAMAVALIISNLITSPLRRSADLVHQIKQGDLSGLSEPIPPARDEAMLIA
RDIQEMREGLRQMVQSIQDNAHQVSDSARALSGMAQQVANGAQTQAEATTSAAASIEQLTVSINQVADNSSEASEQAQAA
GQLANRGGHEVLESVGKIRFVTTSVDETARQMNSLTKEVQQIGNIVTVIRDVADQTNLLALNAAIEAARAGETGRGFAVV
ADEVRKLAERTTTSAQEITKMIGSIQQGVGQVVSSMGQSLDCVEGVSGTAEQASNSMREIETSADTIMRTIHSITGALTE
QRSTSLSLAQDMEKVSRMAEENNATVQELATTSSQLNALSANLQSVATRFRL

Sequences:

>Translated_532_residues
MLGGFSLLILLLCAVVLIAYNKLQTIQNNITEIKEDRYPKIVLSQRIALNLLYISRGVRDGVLARDPQKVEQQIRNVEVL
RANNRADLDKMEPMLSTPEGRALFAKIRAAQDSQRPLFEPLYGLMRSHQTDAARDMLENQFAPTNNAFISALLSLRDRQQ
SRLDKSMQEAMDSSQQAVAILLGTALASLLLAMAVALIISNLITSPLRRSADLVHQIKQGDLSGLSEPIPPARDEAMLIA
RDIQEMREGLRQMVQSIQDNAHQVSDSARALSGMAQQVANGAQTQAEATTSAAASIEQLTVSINQVADNSSEASEQAQAA
GQLANRGGHEVLESVGKIRFVTTSVDETARQMNSLTKEVQQIGNIVTVIRDVADQTNLLALNAAIEAARAGETGRGFAVV
ADEVRKLAERTTTSAQEITKMIGSIQQGVGQVVSSMGQSLDCVEGVSGTAEQASNSMREIETSADTIMRTIHSITGALTE
QRSTSLSLAQDMEKVSRMAEENNATVQELATTSSQLNALSANLQSVATRFRL
>Mature_532_residues
MLGGFSLLILLLCAVVLIAYNKLQTIQNNITEIKEDRYPKIVLSQRIALNLLYISRGVRDGVLARDPQKVEQQIRNVEVL
RANNRADLDKMEPMLSTPEGRALFAKIRAAQDSQRPLFEPLYGLMRSHQTDAARDMLENQFAPTNNAFISALLSLRDRQQ
SRLDKSMQEAMDSSQQAVAILLGTALASLLLAMAVALIISNLITSPLRRSADLVHQIKQGDLSGLSEPIPPARDEAMLIA
RDIQEMREGLRQMVQSIQDNAHQVSDSARALSGMAQQVANGAQTQAEATTSAAASIEQLTVSINQVADNSSEASEQAQAA
GQLANRGGHEVLESVGKIRFVTTSVDETARQMNSLTKEVQQIGNIVTVIRDVADQTNLLALNAAIEAARAGETGRGFAVV
ADEVRKLAERTTTSAQEITKMIGSIQQGVGQVVSSMGQSLDCVEGVSGTAEQASNSMREIETSADTIMRTIHSITGALTE
QRSTSLSLAQDMEKVSRMAEENNATVQELATTSSQLNALSANLQSVATRFRL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=422, Percent_Identity=28.1990521327014, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI2367378, Length=337, Percent_Identity=32.9376854599407, Blast_Score=135, Evalue=6e-33,
Organism=Escherichia coli, GI1788195, Length=285, Percent_Identity=32.280701754386, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI1788194, Length=361, Percent_Identity=29.9168975069252, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI1789453, Length=295, Percent_Identity=27.7966101694915, Blast_Score=98, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 57563; Mature: 57563

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGGFSLLILLLCAVVLIAYNKLQTIQNNITEIKEDRYPKIVLSQRIALNLLYISRGVRD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
GVLARDPQKVEQQIRNVEVLRANNRADLDKMEPMLSTPEGRALFAKIRAAQDSQRPLFEP
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHH
LYGLMRSHQTDAARDMLENQFAPTNNAFISALLSLRDRQQSRLDKSMQEAMDSSQQAVAI
HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLGTALASLLLAMAVALIISNLITSPLRRSADLVHQIKQGDLSGLSEPIPPARDEAMLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
RDIQEMREGLRQMVQSIQDNAHQVSDSARALSGMAQQVANGAQTQAEATTSAAASIEQLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VSINQVADNSSEASEQAQAAGQLANRGGHEVLESVGKIRFVTTSVDETARQMNSLTKEVQ
HHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHH
QIGNIVTVIRDVADQTNLLALNAAIEAARAGETGRGFAVVADEVRKLAERTTTSAQEITK
HHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
MIGSIQQGVGQVVSSMGQSLDCVEGVSGTAEQASNSMREIETSADTIMRTIHSITGALTE
HHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRSTSLSLAQDMEKVSRMAEENNATVQELATTSSQLNALSANLQSVATRFRL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLGGFSLLILLLCAVVLIAYNKLQTIQNNITEIKEDRYPKIVLSQRIALNLLYISRGVRD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
GVLARDPQKVEQQIRNVEVLRANNRADLDKMEPMLSTPEGRALFAKIRAAQDSQRPLFEP
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHH
LYGLMRSHQTDAARDMLENQFAPTNNAFISALLSLRDRQQSRLDKSMQEAMDSSQQAVAI
HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLGTALASLLLAMAVALIISNLITSPLRRSADLVHQIKQGDLSGLSEPIPPARDEAMLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
RDIQEMREGLRQMVQSIQDNAHQVSDSARALSGMAQQVANGAQTQAEATTSAAASIEQLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VSINQVADNSSEASEQAQAAGQLANRGGHEVLESVGKIRFVTTSVDETARQMNSLTKEVQ
HHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHH
QIGNIVTVIRDVADQTNLLALNAAIEAARAGETGRGFAVVADEVRKLAERTTTSAQEITK
HHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
MIGSIQQGVGQVVSSMGQSLDCVEGVSGTAEQASNSMREIETSADTIMRTIHSITGALTE
HHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRSTSLSLAQDMEKVSRMAEENNATVQELATTSSQLNALSANLQSVATRFRL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]