| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is upk
Identifier: 34496782
GI number: 34496782
Start: 1396079
End: 1396891
Strand: Reverse
Name: upk
Synonym: CV_1327
Alternate gene names: 34496782
Gene position: 1396891-1396079 (Counterclockwise)
Preceding gene: 34496783
Following gene: 34496776
Centisome position: 29.4
GC content: 64.82
Gene sequence:
>813_bases CTGCTGTTCCACTCCCTGATCATGGGCCTGGTCGAGGGCATCACCGAATTCCTCCCGATCTCCTCCACCGGCCACCTGAT CCTGACCGGCGACCTGCTGGGCTTTCTCGACAAGGAAAAGCGCGACGTCTACGAAATTTTCATCCAGCTGGGCGCAATGC TGGCGGTGGTGTGGGAGTACCGCCGCAAGATAGGCCATACCGTGGCCGGCGCCGTCCGTCCCGGCGGCGAGCGCAATCTG CTGCTCGGCATCGTCATCGCCTTCATCCCCGCCGCCGTCGCCGGCCTGCTGTTTTCCAAGCAGATCAAAGCCGTGCTGTT CAATCCGGTATGCGTGGCCATCGCCTTCATCGTCGGCGGCCTGATCATCCTGTGGGCGGAAAAGCGCGAGCATAAAGTCG CGGTGGAGACCGTCGACGATCTGAGCCTGAAGGACGCGCTGAAAGTGGGACTGTGCCAGTGCCTGGCCCTGATCCCCGGC ACCAGCCGCTCCGGCGCCACCATCATCGGCGGCCTGTTCCTGGGCCTGTCGCGCAAGGCGGCCACCGAGTTCTCGTTCTT TCTCGGCATCCCGACGCTGGGCGCCGCCTCGCTGTACAGCCTCATCAAGCACCGCGACGCGCTGAGCGCGGACGACATCG GCGTGTTCGCCGTCGGCTTTATCGCGTCCTTCGTCTTCGCCTTCCTCGCCATCCGCGCGCTGCTGCGCTTCATCTCCACG CACAGCTTCGCGGTGTTCGCCTGGTATCGCATCGCCTTCGGCCTGATCGTGCTGGGGACCTGGTGGAGCGGCCTGGTGAA CTGGAGCGCCTGA
Upstream 100 bases:
>100_bases GCGGACGCGCGACAAGCGGCCAACAACATGCATGCTTCTCGCTTATAATCGCGTCCATTCTTCCCAACTCACCCAAACCG AGCGTTCAATGGATCCGATC
Downstream 100 bases:
>100_bases AACAGAGGAACCAAAGGCAGGGCAGGCCTATAGGCCTTGCCCTGCCTCAGCCAACAAAAGTTATACCCAGCTGCGAGTGT GATTGATTGCTTCTTTCCGT
Product: undecaprenol kinase
Products: NA
Alternate protein names: Bacitracin resistance protein 1; Undecaprenyl pyrophosphate phosphatase 1
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MLFHSLIMGLVEGITEFLPISSTGHLILTGDLLGFLDKEKRDVYEIFIQLGAMLAVVWEYRRKIGHTVAGAVRPGGERNL LLGIVIAFIPAAVAGLLFSKQIKAVLFNPVCVAIAFIVGGLIILWAEKREHKVAVETVDDLSLKDALKVGLCQCLALIPG TSRSGATIIGGLFLGLSRKAATEFSFFLGIPTLGAASLYSLIKHRDALSADDIGVFAVGFIASFVFAFLAIRALLRFIST HSFAVFAWYRIAFGLIVLGTWWSGLVNWSA
Sequences:
>Translated_270_residues MLFHSLIMGLVEGITEFLPISSTGHLILTGDLLGFLDKEKRDVYEIFIQLGAMLAVVWEYRRKIGHTVAGAVRPGGERNL LLGIVIAFIPAAVAGLLFSKQIKAVLFNPVCVAIAFIVGGLIILWAEKREHKVAVETVDDLSLKDALKVGLCQCLALIPG TSRSGATIIGGLFLGLSRKAATEFSFFLGIPTLGAASLYSLIKHRDALSADDIGVFAVGFIASFVFAFLAIRALLRFIST HSFAVFAWYRIAFGLIVLGTWWSGLVNWSA >Mature_270_residues MLFHSLIMGLVEGITEFLPISSTGHLILTGDLLGFLDKEKRDVYEIFIQLGAMLAVVWEYRRKIGHTVAGAVRPGGERNL LLGIVIAFIPAAVAGLLFSKQIKAVLFNPVCVAIAFIVGGLIILWAEKREHKVAVETVDDLSLKDALKVGLCQCLALIPG TSRSGATIIGGLFLGLSRKAATEFSFFLGIPTLGAASLYSLIKHRDALSADDIGVFAVGFIASFVFAFLAIRALLRFIST HSFAVFAWYRIAFGLIVLGTWWSGLVNWSA
Specific function: Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
COG id: COG1968
COG function: function code V; Uncharacterized bacitracin resistance protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uppP family
Homologues:
Organism=Escherichia coli, GI1789437, Length=259, Percent_Identity=46.3320463320463, Blast_Score=194, Evalue=4e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UPPP1_CHRVO (Q7NYE7)
Other databases:
- EMBL: AE016825 - RefSeq: NP_900997.1 - GeneID: 2547669 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_1327 - NMPDR: fig|243365.1.peg.1327 - HOGENOM: HBG391969 - OMA: LVQCLAM - PhylomeDB: Q7NYE7 - BioCyc: CVIO243365:CV_1327-MONOMER - BRENDA: 3.6.1.27 - GO: GO:0016311 - HAMAP: MF_01006 - InterPro: IPR003824 - TIGRFAMs: TIGR00753
Pfam domain/function: PF02673 BacA
EC number: =3.6.1.27
Molecular weight: Translated: 29198; Mature: 29198
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc3c1d14)-; HASH(0xed3b77c)-; HASH(0xedd3dd0)-; HASH(0xe6474d0)-; HASH(0xd0b5b0c)-; HASH(0xe72f0f8)-;
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFHSLIMGLVEGITEFLPISSTGHLILTGDLLGFLDKEKRDVYEIFIQLGAMLAVVWEY CHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH RRKIGHTVAGAVRPGGERNLLLGIVIAFIPAAVAGLLFSKQIKAVLFNPVCVAIAFIVGG HHHHCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIILWAEKREHKVAVETVDDLSLKDALKVGLCQCLALIPGTSRSGATIIGGLFLGLSRKA HHEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH ATEFSFFLGIPTLGAASLYSLIKHRDALSADDIGVFAVGFIASFVFAFLAIRALLRFIST HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSFAVFAWYRIAFGLIVLGTWWSGLVNWSA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCH >Mature Secondary Structure MLFHSLIMGLVEGITEFLPISSTGHLILTGDLLGFLDKEKRDVYEIFIQLGAMLAVVWEY CHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH RRKIGHTVAGAVRPGGERNLLLGIVIAFIPAAVAGLLFSKQIKAVLFNPVCVAIAFIVGG HHHHCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIILWAEKREHKVAVETVDDLSLKDALKVGLCQCLALIPGTSRSGATIIGGLFLGLSRKA HHEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH ATEFSFFLGIPTLGAASLYSLIKHRDALSADDIGVFAVGFIASFVFAFLAIRALLRFIST HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSFAVFAWYRIAFGLIVLGTWWSGLVNWSA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 14500782