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The map label for this gene is glxA [H]

Identifier: 34496769

GI number: 34496769

Start: 1384192

End: 1385124

Strand: Direct

Name: glxA [H]

Synonym: CV_1314

Alternate gene names: 34496769

Gene position: 1384192-1385124 (Clockwise)

Preceding gene: 34496766

Following gene: 34496772

Centisome position: 29.13

GC content: 69.35

Gene sequence:

>933_bases
ATGATCCGGGACATCGCCATTCTGTTGTTCGACGGTTTCCAGCTGCTGGATGCGGCGGGGCCGATCTCCGTTTTCGAGTG
CGCGCTGCGCTACCGCCCCGGCGCGTACAGGCTGACGCCGTTGACGCGGAACGGCGGCGCGGCGCGCAGCTCTTCCGGCG
TTGTCATCGACAGCCGGCCGCTGTCCTCGCTGCCGGCGCCGGATACCTTGCTGGTGGCCGGCGGCGAGGGCGCGCCTGCC
GTTTTGGATTGCGCAGAGACCCAGGCCTATATCCGGCGTTGCGCGCAAGACTCGCGTCGGGTGGTCAGCGTATGCACGGG
CGCTTTCCTGCTGGCGGAGGCAGGCTTGCTGGACGGTCGGCGAGCCACTACCCACTGGGCGCATGGCGGCGAGTTCGTCC
GCCGCTATCCGAAGGTGGAATTGGACGCCGACCGCATCTTCATCCGCCAGGATAGCGTGTGGACGGCGGCCGGCGTCAGC
GCCGGCATCGACGTGGCGCTGGCGCTGGTGGCGGAAGACATGGGAGAGGACATCGCCCGGCGCTGCGCGCAGCGGTTGGT
GGTGTATTACCGTCGTCCAGGCGGACAGTCGCAGTTCTCGTCGCTGCTGGAAATGCAGCGGCCGGACGGGCGCTTCGCGG
CCTTGCTCGATCAGGTGCGGCGCAGCCTGGACGCGCCGTGGGATGTTGAGGCATTGGCTGGATTCTGTTGCCTGAGCCCG
CGCCACTTCTCGCGCCTGTTCCAGGCCGAGGTGGGCATGCCGCCGGCCAAGGCGGTGGAGCAACTGCGGGTGGAAGCCGC
GCGTTCCGCGCTGGAAAGCGGCGAGCGCTCGATGCAAAGGGTGGCGCGCCAGTGCGGCTTCGGCGACGCGGAACGGATGC
GCCGCAGCTTCCTGCGCGTGCTGGGGCGCCAGCCGTCCAGCCTGCTGCGCTGA

Upstream 100 bases:

>100_bases
GTATAGGGTGGGTTCATGATGCCTCCGGGCCGTGATTGACCCTGCCATCATCGAATGGCTATGATTTGGCGTAAATGACA
AGATTGCAGCTTTTCATGCC

Downstream 100 bases:

>100_bases
TTCGCGGCGGGCTTGGCGCCGCTGGCAACACGCCTGATCCTGCGTTGCGCTTGCTGGCGGTGCGGCTTGTGCCGCCTGCG
CCGACGCGCCTTGGCTCTGG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MIRDIAILLFDGFQLLDAAGPISVFECALRYRPGAYRLTPLTRNGGAARSSSGVVIDSRPLSSLPAPDTLLVAGGEGAPA
VLDCAETQAYIRRCAQDSRRVVSVCTGAFLLAEAGLLDGRRATTHWAHGGEFVRRYPKVELDADRIFIRQDSVWTAAGVS
AGIDVALALVAEDMGEDIARRCAQRLVVYYRRPGGQSQFSSLLEMQRPDGRFAALLDQVRRSLDAPWDVEALAGFCCLSP
RHFSRLFQAEVGMPPAKAVEQLRVEAARSALESGERSMQRVARQCGFGDAERMRRSFLRVLGRQPSSLLR

Sequences:

>Translated_310_residues
MIRDIAILLFDGFQLLDAAGPISVFECALRYRPGAYRLTPLTRNGGAARSSSGVVIDSRPLSSLPAPDTLLVAGGEGAPA
VLDCAETQAYIRRCAQDSRRVVSVCTGAFLLAEAGLLDGRRATTHWAHGGEFVRRYPKVELDADRIFIRQDSVWTAAGVS
AGIDVALALVAEDMGEDIARRCAQRLVVYYRRPGGQSQFSSLLEMQRPDGRFAALLDQVRRSLDAPWDVEALAGFCCLSP
RHFSRLFQAEVGMPPAKAVEQLRVEAARSALESGERSMQRVARQCGFGDAERMRRSFLRVLGRQPSSLLR
>Mature_310_residues
MIRDIAILLFDGFQLLDAAGPISVFECALRYRPGAYRLTPLTRNGGAARSSSGVVIDSRPLSSLPAPDTLLVAGGEGAPA
VLDCAETQAYIRRCAQDSRRVVSVCTGAFLLAEAGLLDGRRATTHWAHGGEFVRRYPKVELDADRIFIRQDSVWTAAGVS
AGIDVALALVAEDMGEDIARRCAQRLVVYYRRPGGQSQFSSLLEMQRPDGRFAALLDQVRRSLDAPWDVEALAGFCCLSP
RHFSRLFQAEVGMPPAKAVEQLRVEAARSALESGERSMQRVARQCGFGDAERMRRSFLRVLGRQPSSLLR

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 33926; Mature: 33926

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRDIAILLFDGFQLLDAAGPISVFECALRYRPGAYRLTPLTRNGGAARSSSGVVIDSRP
CCCCEEEHHHCCHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEECCC
LSSLPAPDTLLVAGGEGAPAVLDCAETQAYIRRCAQDSRRVVSVCTGAFLLAEAGLLDGR
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RATTHWAHGGEFVRRYPKVELDADRIFIRQDSVWTAAGVSAGIDVALALVAEDMGEDIAR
CCCCCCCCCHHHHHHCCCCEECCCEEEEEECCCEEHHCCHHHHHHHHHHHHHHHHHHHHH
RCAQRLVVYYRRPGGQSQFSSLLEMQRPDGRFAALLDQVRRSLDAPWDVEALAGFCCLSP
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCH
RHFSRLFQAEVGMPPAKAVEQLRVEAARSALESGERSMQRVARQCGFGDAERMRRSFLRV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LGRQPSSLLR
HCCCCHHHCC
>Mature Secondary Structure
MIRDIAILLFDGFQLLDAAGPISVFECALRYRPGAYRLTPLTRNGGAARSSSGVVIDSRP
CCCCEEEHHHCCHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEECCC
LSSLPAPDTLLVAGGEGAPAVLDCAETQAYIRRCAQDSRRVVSVCTGAFLLAEAGLLDGR
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RATTHWAHGGEFVRRYPKVELDADRIFIRQDSVWTAAGVSAGIDVALALVAEDMGEDIAR
CCCCCCCCCHHHHHHCCCCEECCCEEEEEECCCEEHHCCHHHHHHHHHHHHHHHHHHHHH
RCAQRLVVYYRRPGGQSQFSSLLEMQRPDGRFAALLDQVRRSLDAPWDVEALAGFCCLSP
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCH
RHFSRLFQAEVGMPPAKAVEQLRVEAARSALESGERSMQRVARQCGFGDAERMRRSFLRV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LGRQPSSLLR
HCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]