| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496766
Identifier: 34496766
GI number: 34496766
Start: 1382185
End: 1382886
Strand: Direct
Name: 34496766
Synonym: CV_1311
Alternate gene names: NA
Gene position: 1382185-1382886 (Clockwise)
Preceding gene: 34496765
Following gene: 34496769
Centisome position: 29.09
GC content: 60.11
Gene sequence:
>702_bases ATGGCTTCGGTCAACCAGTTCGCTTATGTTCCCGGCACCAACACCTACAAGTTCGCCTACGGCGGATCCATTCCCAACAT GCCCGTCGTCAACATGCCTGCCGACACCAACTGGCTGCGCTGGGCGATGCTGAACGACGGCGAGTATTACCGGATGTACT TCTTCAAGGGCAGCACCGCCAACACGCTGTACCAGGCGGCGTTCAATCCCGCGACCGGCGCTTACGAGTTCGGCTACAAC TCGATCAAGGAGCTGCAAATCACCGGCGCGCCGGCCGACGCCGACGCCAGCAGCCTGGCGATGCTCTACGACGGCAGCAC CAAGACCTATCGGCTGTATCTGCGCCGGTTGGGCGCGCCGACGGTGCTGTACCAGTTCGGCTTCAATCGGGAAACCAGCC GCTACGAGTACGGCTACAACTCGATTCCCACGCTGAATGTGGTGAAGGCGCCCGGCGACACCGACTGGCACCGCTGGTCG ATGCTGTTCGACGGCAGCGCTTACCGTCTGTACGCGTTCAAGGTCGGCAGCACCGATACCTTCTATCAGTTCGCCTACAA TCGGCAGACGAATCAGTACGAGTACGGCTTCGATTCGATTCCGGTGCTGAGCCTGGTGGATATCCCGGCCAACAGCAATC TGACCAGTATGGCGATGCTGTTCGGGCAGGGCGATTACCGCTTGTACTTCCAGACGCTCTGA
Upstream 100 bases:
>100_bases TCCGGCATGTCGCGCCGAATGGCTTTATCGCGCCGAGGGGGAGTCCGGGGCCGGCAGTTTCTGCGGGCCCGCGCCAGTAC AAGCTCAGGAGGAAAACGCC
Downstream 100 bases:
>100_bases CGCGAACGGCGGCGCGGCGGACAGGCGCCCGCCGCGCGCGCCTCCGTCATGGGCCCGTCACCAGCAACAGCAGGCCGGCG CCCTGTTCCGGCGCGCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MASVNQFAYVPGTNTYKFAYGGSIPNMPVVNMPADTNWLRWAMLNDGEYYRMYFFKGSTANTLYQAAFNPATGAYEFGYN SIKELQITGAPADADASSLAMLYDGSTKTYRLYLRRLGAPTVLYQFGFNRETSRYEYGYNSIPTLNVVKAPGDTDWHRWS MLFDGSAYRLYAFKVGSTDTFYQFAYNRQTNQYEYGFDSIPVLSLVDIPANSNLTSMAMLFGQGDYRLYFQTL
Sequences:
>Translated_233_residues MASVNQFAYVPGTNTYKFAYGGSIPNMPVVNMPADTNWLRWAMLNDGEYYRMYFFKGSTANTLYQAAFNPATGAYEFGYN SIKELQITGAPADADASSLAMLYDGSTKTYRLYLRRLGAPTVLYQFGFNRETSRYEYGYNSIPTLNVVKAPGDTDWHRWS MLFDGSAYRLYAFKVGSTDTFYQFAYNRQTNQYEYGFDSIPVLSLVDIPANSNLTSMAMLFGQGDYRLYFQTL >Mature_232_residues ASVNQFAYVPGTNTYKFAYGGSIPNMPVVNMPADTNWLRWAMLNDGEYYRMYFFKGSTANTLYQAAFNPATGAYEFGYNS IKELQITGAPADADASSLAMLYDGSTKTYRLYLRRLGAPTVLYQFGFNRETSRYEYGYNSIPTLNVVKAPGDTDWHRWSM LFDGSAYRLYAFKVGSTDTFYQFAYNRQTNQYEYGFDSIPVLSLVDIPANSNLTSMAMLFGQGDYRLYFQTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26519; Mature: 26388
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVNQFAYVPGTNTYKFAYGGSIPNMPVVNMPADTNWLRWAMLNDGEYYRMYFFKGSTA CCCCCCEEEECCCCEEEEEECCCCCCCCEEECCCCCCEEEEEEECCCCEEEEEEEECCCC NTLYQAAFNPATGAYEFGYNSIKELQITGAPADADASSLAMLYDGSTKTYRLYLRRLGAP CEEEEEECCCCCCEEECCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEHHHCCCC TVLYQFGFNRETSRYEYGYNSIPTLNVVKAPGDTDWHRWSMLFDGSAYRLYAFKVGSTDT EEEEEECCCCCCCEEECCCCCCCEEEEEECCCCCCCEEEEEEECCCEEEEEEEEECCCCE FYQFAYNRQTNQYEYGFDSIPVLSLVDIPANSNLTSMAMLFGQGDYRLYFQTL EEEEEECCCCCCEECCCCCCCEEEEEECCCCCCHHEEEEEECCCCEEEEEEEC >Mature Secondary Structure ASVNQFAYVPGTNTYKFAYGGSIPNMPVVNMPADTNWLRWAMLNDGEYYRMYFFKGSTA CCCCCEEEECCCCEEEEEECCCCCCCCEEECCCCCCEEEEEEECCCCEEEEEEEECCCC NTLYQAAFNPATGAYEFGYNSIKELQITGAPADADASSLAMLYDGSTKTYRLYLRRLGAP CEEEEEECCCCCCEEECCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEHHHCCCC TVLYQFGFNRETSRYEYGYNSIPTLNVVKAPGDTDWHRWSMLFDGSAYRLYAFKVGSTDT EEEEEECCCCCCCEEECCCCCCCEEEEEECCCCCCCEEEEEEECCCEEEEEEEEECCCCE FYQFAYNRQTNQYEYGFDSIPVLSLVDIPANSNLTSMAMLFGQGDYRLYFQTL EEEEEECCCCCCEECCCCCCCEEEEEECCCCCCHHEEEEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA