| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496767
Identifier: 34496767
GI number: 34496767
Start: 1382933
End: 1383289
Strand: Reverse
Name: 34496767
Synonym: CV_1312
Alternate gene names: NA
Gene position: 1383289-1382933 (Counterclockwise)
Preceding gene: 34496768
Following gene: 34496758
Centisome position: 29.12
GC content: 67.79
Gene sequence:
>357_bases ATGAGCCTGTATGCCGAACTGGTCAGACACGCCGCGGATCAATACCGCTCCCAGCTGGACGCGCTCTACGCGCGGCAGCA TGCCATCCAGCAAGCCGACCGGATCGCCGGGCTGCTGAGCAAGGCCGGCCTCCCGGCGCGGGCCCAGGCCGACGAGCAAT TCATGCCCTATGTCGAGCTGCCGCTGGCCGAGGAATTGCAGGCCATGCGGCAGGCGGTGCTGAGCTATGTCTGCAATGTG CTGGAGTGCCGGCTGGAAGGCGGCGCTATTGCCGGCGGGCATCGCTGTTACCGGATCTTGCCCGACGGCGCGCCGGAACA GGGCGCCGGCCTGCTGTTGCTGGTGACGGGCCCATGA
Upstream 100 bases:
>100_bases GCCGCTGCTGCAGCGGCTAAACCTAAAGCATGACACTCCATCCCTGCGCGCGCCGCTCCGGCCCTCCGGACGGCCCGCTC CCTCCCGCCCGAGGTGAAAG
Downstream 100 bases:
>100_bases CGGAGGCGCGCGCGGCGGGCGCCTGTCCGCCGCGCCGCCGTTCGCGTCAGAGCGTCTGGAAGTACAAGCGGTAATCGCCC TGCCCGAACAGCATCGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MSLYAELVRHAADQYRSQLDALYARQHAIQQADRIAGLLSKAGLPARAQADEQFMPYVELPLAEELQAMRQAVLSYVCNV LECRLEGGAIAGGHRCYRILPDGAPEQGAGLLLLVTGP
Sequences:
>Translated_118_residues MSLYAELVRHAADQYRSQLDALYARQHAIQQADRIAGLLSKAGLPARAQADEQFMPYVELPLAEELQAMRQAVLSYVCNV LECRLEGGAIAGGHRCYRILPDGAPEQGAGLLLLVTGP >Mature_117_residues SLYAELVRHAADQYRSQLDALYARQHAIQQADRIAGLLSKAGLPARAQADEQFMPYVELPLAEELQAMRQAVLSYVCNVL ECRLEGGAIAGGHRCYRILPDGAPEQGAGLLLLVTGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12834; Mature: 12703
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLYAELVRHAADQYRSQLDALYARQHAIQQADRIAGLLSKAGLPARAQADEQFMPYVEL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PLAEELQAMRQAVLSYVCNVLECRLEGGAIAGGHRCYRILPDGAPEQGAGLLLLVTGP CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEECCCCCCCCCCCEEEEEECC >Mature Secondary Structure SLYAELVRHAADQYRSQLDALYARQHAIQQADRIAGLLSKAGLPARAQADEQFMPYVEL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PLAEELQAMRQAVLSYVCNVLECRLEGGAIAGGHRCYRILPDGAPEQGAGLLLLVTGP CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEECCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA