Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is 34496768

Identifier: 34496768

GI number: 34496768

Start: 1383422

End: 1384108

Strand: Reverse

Name: 34496768

Synonym: CV_1313

Alternate gene names: NA

Gene position: 1384108-1383422 (Counterclockwise)

Preceding gene: 34496770

Following gene: 34496767

Centisome position: 29.13

GC content: 70.01

Gene sequence:

>687_bases
ATGAACCCACCCTATACCATCGTTTTCGCCCTGTATCCCGGCGTCACCCAGCTCGACTTCACCGGCCCGCTGGAGTTTCT
GAGCAAGCTGCCCCATGCCCGCTGCGTACTGGCATCCAGCCGGGGGGAAGATATCCGCGCCGACGGCGGCATCGTCTTCG
CCGACATCGCCCGGCTTGGCGCTATCGAGCGCTGCGATCTGCTGCTGGTGCCGGGCGGCCTGGGCACCATAGAAGCGATG
GAGGATGCCGAATTGCTGGCGCAGTTGCGCCGTCTCGCCGCCAGCGCCGACTATGTCAGCTCGGTCTGCACCGGCTCGCT
GCTGCTCGGCGCGGCCGGCCTGCTCAAGGGTCGCCGCGCCGCCTGCCACTGGGCCTGGCTGGACAGCCTGGCGGCCTTCG
GCGCCCAGCCCTGCCCGGATCGGGTGGTGGTGGACGGCAAGCTGATCAGCGGCGGCGGCGTCACCGCCGGCATAGACATG
GCGCTGACGCTGATGGCGGAAATCGCCGGGCCGCAATTCGCGCAAACGGCGCAGCTGACGCTGGAATACGCGCCGGCTCC
GCCATTCGCATCCGGCCGGCCGGAGTTGGCCAGCCCGGAAGTGCTGGCCGCGGCCCGGCAGGGGATCGACCAGGTCAGAG
ACCGGCGCGAGGCGGCGGTGATACGCGCCGCCGCCGCATGCTTGTGA

Upstream 100 bases:

>100_bases
GCGATGTCCCGGATCATGGCATGAAAAGCTGCAATCTTGTCATTTACGCCAAATCATAGCCATTCGATGATGGCAGGGTC
AATCACGGCCCGGAGGCATC

Downstream 100 bases:

>100_bases
ATGGGGAAAACCTGTCCAAGCGGCTGACCTGCGCCGCTGCTGCAGCGGCTAAACCTAAAGCATGACACTCCATCCCTGCG
CGCGCCGCTCCGGCCCTCCG

Product: ThiJ/PfpI family protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Isonitrile Hydratase; Transcriptional Regulator; AraC Family Transcriptional Regulator; ThiJ Family Protein; DJ-1/PfpI Family; Transcription Regulator Protein; DJ-1/PfpI Superfamily Protein; Twin-Arginine Translocation Pathway Signal; Transcriptional Regulator AraC Family; PfpI Family Protein; Hydratase; Cyclohexyl-Isocyanide Hydratase; ThiH/PfpI Family Amidotransferase; Intracellular Protease/Amidase; Transcriptional Regulatory Protein; Thij/Pfpi Family Protein; Transcription Regulator Protein ThiJ/PfpI; Transcriptional Regulator Protein Thij/Pfpi; Transcriptional Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNPPYTIVFALYPGVTQLDFTGPLEFLSKLPHARCVLASSRGEDIRADGGIVFADIARLGAIERCDLLLVPGGLGTIEAM
EDAELLAQLRRLAASADYVSSVCTGSLLLGAAGLLKGRRAACHWAWLDSLAAFGAQPCPDRVVVDGKLISGGGVTAGIDM
ALTLMAEIAGPQFAQTAQLTLEYAPAPPFASGRPELASPEVLAAARQGIDQVRDRREAAVIRAAAACL

Sequences:

>Translated_228_residues
MNPPYTIVFALYPGVTQLDFTGPLEFLSKLPHARCVLASSRGEDIRADGGIVFADIARLGAIERCDLLLVPGGLGTIEAM
EDAELLAQLRRLAASADYVSSVCTGSLLLGAAGLLKGRRAACHWAWLDSLAAFGAQPCPDRVVVDGKLISGGGVTAGIDM
ALTLMAEIAGPQFAQTAQLTLEYAPAPPFASGRPELASPEVLAAARQGIDQVRDRREAAVIRAAAACL
>Mature_228_residues
MNPPYTIVFALYPGVTQLDFTGPLEFLSKLPHARCVLASSRGEDIRADGGIVFADIARLGAIERCDLLLVPGGLGTIEAM
EDAELLAQLRRLAASADYVSSVCTGSLLLGAAGLLKGRRAACHWAWLDSLAAFGAQPCPDRVVVDGKLISGGGVTAGIDM
ALTLMAEIAGPQFAQTAQLTLEYAPAPPFASGRPELASPEVLAAARQGIDQVRDRREAAVIRAAAACL

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23784; Mature: 23784

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPPYTIVFALYPGVTQLDFTGPLEFLSKLPHARCVLASSRGEDIRADGGIVFADIARLG
CCCCEEEEEEECCCCEEECCCCHHHHHHHCCCCEEEEECCCCCCEECCCCEEEEHHHHHC
AIERCDLLLVPGGLGTIEAMEDAELLAQLRRLAASADYVSSVCTGSLLLGAAGLLKGRRA
CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ACHWAWLDSLAAFGAQPCPDRVVVDGKLISGGGVTAGIDMALTLMAEIAGPQFAQTAQLT
HHHHHHHHHHHHHCCCCCCCCEEECCEEECCCCCHHHHHHHHHHHHHHCCCCHHCEEEEE
LEYAPAPPFASGRPELASPEVLAAARQGIDQVRDRREAAVIRAAAACL
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNPPYTIVFALYPGVTQLDFTGPLEFLSKLPHARCVLASSRGEDIRADGGIVFADIARLG
CCCCEEEEEEECCCCEEECCCCHHHHHHHCCCCEEEEECCCCCCEECCCCEEEEHHHHHC
AIERCDLLLVPGGLGTIEAMEDAELLAQLRRLAASADYVSSVCTGSLLLGAAGLLKGRRA
CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ACHWAWLDSLAAFGAQPCPDRVVVDGKLISGGGVTAGIDMALTLMAEIAGPQFAQTAQLT
HHHHHHHHHHHHHCCCCCCCCEEECCEEECCCCCHHHHHHHHHHHHHHCCCCHHCEEEEE
LEYAPAPPFASGRPELASPEVLAAARQGIDQVRDRREAAVIRAAAACL
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA