| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is guaB [H]
Identifier: 34496758
GI number: 34496758
Start: 1372814
End: 1374277
Strand: Reverse
Name: guaB [H]
Synonym: CV_1303
Alternate gene names: 34496758
Gene position: 1374277-1372814 (Counterclockwise)
Preceding gene: 34496767
Following gene: 34496755
Centisome position: 28.93
GC content: 65.98
Gene sequence:
>1464_bases ATGCGCATCATCGAGAAAGCCTACACCTTCGACGACGTCCTCCTCGTCCCGGCCCATTCTGAAGTTCTGCCGCGCGATGT AGCGCTCAGCACCAAACTCACCCGCAACATCACGCTCAATCTGCCGCTGGTTTCCGCCGCCATGGACACCGTGACCGAAG CCCGCCTCGCCATCGCCATGGCCCAGGAAGGCGGCATCGGCATCGTGCACAAGAACATGAGCGTGGAAAAGCAGGCGGCC GAGGTTTCCAAGGTGAAGCGCCATGAAAGCGGCGTGGTGAAAGACCCGATCACCATCGCGCCGGACATGCTGGTGCGCGA CCTGGTCCTGCTGACCCGCCAGTACAAGATTTCCGGCCTACCGGTGATCGAAGCCGGCAAGGTGGTGGGCATCGTCACCA ACCGCGACCTGCGCTTTGAAACCCGCCTCGACCAGACCGTCGGCTCCATCATGACCCCGCGCGAGCGCCTGATCACCGTC AAGGAAGGCGCCAGCATCGACGAAGCCCGCGAGCTGATGCACACCCACCGCCTCGAGCGCGTGCTGGTGATCAACGACGC CTGGGAGCTAAAGGGCCTGATCACGGTCAAGGACATCATCAAGACCAGCGAACATCCGAACGCCAATAAGGACAGCCAGG GCCGCCTGCGCGTCGGCGCGGCGGTCGGCACCGGCGCCGACACCGAAGAGCGCGTCAAGGCGCTGGTTGCCGCCGGCGTA GACGTGATCGTGGTCGACACCGCCCACGGCCACAGCCAGGGCGTGCTGGAACGCGTGCGCTGGGTCAAGCAGAACTTCCC GCAAGTGGACGTGATCGGCGGCAACATCGCCACCGCCCAGGCGGCGCTGGATCTGGTCAAGGCCGGCGCCGACGGCGTCA AGGTCGGCATCGGCCCCGGCTCGATCTGCACCACCCGCATCGTCGCCGGCGTGGGCGTGCCGCAACTGACCGCCATCCAC AATGTGTCCGAAGCGCTGAAGGGCACCGGCGTGCCGATGATCGCCGACGGCGGCATCCGCTTCTCCGGCGACATCGCCAA GGCGCTGGCGGCCGGCGGCAACGCGGTAATGCTGGGCGGCATGTTCGCCGGCACCGAGGAAGCCCCGGGCGAGGTGGAAC TGTTCCAGGGCCGTTCGTACAAGTCCTACCGCGGCATGGGTTCGCTGGGCGCGATGAGCCAGGGTTCGGCCGACCGCTAC TTCCAGGAAAGCTCCAACGCCGCCGACAAGTTCGTGCCGGAAGGCATCGAAGGCCGCGTGCCGTACAAGGGCCCGATCGC CCAAGTGATCCACCAGCTGGTGGGCGGCCTGCGCTCGTCGATGGGCTACCTCGGCTGCCCGAGCATCGACCAACTGCACC AGAAGGCCCAATTCGTCGAGATCACCTCGGCCGGCATCCGCGAATCCCACGTCCACGACGTGCAGATCACCAAGGAAGCG CCGAACTACCACGTGGAGCGCTAA
Upstream 100 bases:
>100_bases TAAAGCCTGCCCTCCAGCCGCGCAAAAAGCCGCGTCACGCCGCTTTTGCAGAAAAGTCGACGGTTCGGTATAATGCGGCT TTGCCGCCTAAGGAAATGCG
Downstream 100 bases:
>100_bases GGCGCCTTCCGCTGGAAGCGAAAAAGCCCGCGTTGCGCAACGCGGGCTTTTTTTCGCGCCGGCCGATCAGGCCAGCGACA GCAGCAACAAGGTTTTCAGC
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MRIIEKAYTFDDVLLVPAHSEVLPRDVALSTKLTRNITLNLPLVSAAMDTVTEARLAIAMAQEGGIGIVHKNMSVEKQAA EVSKVKRHESGVVKDPITIAPDMLVRDLVLLTRQYKISGLPVIEAGKVVGIVTNRDLRFETRLDQTVGSIMTPRERLITV KEGASIDEARELMHTHRLERVLVINDAWELKGLITVKDIIKTSEHPNANKDSQGRLRVGAAVGTGADTEERVKALVAAGV DVIVVDTAHGHSQGVLERVRWVKQNFPQVDVIGGNIATAQAALDLVKAGADGVKVGIGPGSICTTRIVAGVGVPQLTAIH NVSEALKGTGVPMIADGGIRFSGDIAKALAAGGNAVMLGGMFAGTEEAPGEVELFQGRSYKSYRGMGSLGAMSQGSADRY FQESSNAADKFVPEGIEGRVPYKGPIAQVIHQLVGGLRSSMGYLGCPSIDQLHQKAQFVEITSAGIRESHVHDVQITKEA PNYHVER
Sequences:
>Translated_487_residues MRIIEKAYTFDDVLLVPAHSEVLPRDVALSTKLTRNITLNLPLVSAAMDTVTEARLAIAMAQEGGIGIVHKNMSVEKQAA EVSKVKRHESGVVKDPITIAPDMLVRDLVLLTRQYKISGLPVIEAGKVVGIVTNRDLRFETRLDQTVGSIMTPRERLITV KEGASIDEARELMHTHRLERVLVINDAWELKGLITVKDIIKTSEHPNANKDSQGRLRVGAAVGTGADTEERVKALVAAGV DVIVVDTAHGHSQGVLERVRWVKQNFPQVDVIGGNIATAQAALDLVKAGADGVKVGIGPGSICTTRIVAGVGVPQLTAIH NVSEALKGTGVPMIADGGIRFSGDIAKALAAGGNAVMLGGMFAGTEEAPGEVELFQGRSYKSYRGMGSLGAMSQGSADRY FQESSNAADKFVPEGIEGRVPYKGPIAQVIHQLVGGLRSSMGYLGCPSIDQLHQKAQFVEITSAGIRESHVHDVQITKEA PNYHVER >Mature_487_residues MRIIEKAYTFDDVLLVPAHSEVLPRDVALSTKLTRNITLNLPLVSAAMDTVTEARLAIAMAQEGGIGIVHKNMSVEKQAA EVSKVKRHESGVVKDPITIAPDMLVRDLVLLTRQYKISGLPVIEAGKVVGIVTNRDLRFETRLDQTVGSIMTPRERLITV KEGASIDEARELMHTHRLERVLVINDAWELKGLITVKDIIKTSEHPNANKDSQGRLRVGAAVGTGADTEERVKALVAAGV DVIVVDTAHGHSQGVLERVRWVKQNFPQVDVIGGNIATAQAALDLVKAGADGVKVGIGPGSICTTRIVAGVGVPQLTAIH NVSEALKGTGVPMIADGGIRFSGDIAKALAAGGNAVMLGGMFAGTEEAPGEVELFQGRSYKSYRGMGSLGAMSQGSADRY FQESSNAADKFVPEGIEGRVPYKGPIAQVIHQLVGGLRSSMGYLGCPSIDQLHQKAQFVEITSAGIRESHVHDVQITKEA PNYHVER
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=452, Percent_Identity=42.2566371681416, Blast_Score=352, Evalue=5e-97, Organism=Homo sapiens, GI34328930, Length=452, Percent_Identity=42.2566371681416, Blast_Score=350, Evalue=1e-96, Organism=Homo sapiens, GI156616279, Length=452, Percent_Identity=42.2566371681416, Blast_Score=350, Evalue=1e-96, Organism=Homo sapiens, GI34328928, Length=452, Percent_Identity=42.2566371681416, Blast_Score=350, Evalue=2e-96, Organism=Homo sapiens, GI66933016, Length=481, Percent_Identity=40.3326403326403, Blast_Score=347, Evalue=2e-95, Organism=Homo sapiens, GI217035152, Length=449, Percent_Identity=42.3162583518931, Blast_Score=346, Evalue=3e-95, Organism=Homo sapiens, GI217035148, Length=452, Percent_Identity=41.3716814159292, Blast_Score=339, Evalue=3e-93, Organism=Homo sapiens, GI217035150, Length=452, Percent_Identity=39.1592920353982, Blast_Score=313, Evalue=3e-85, Organism=Homo sapiens, GI156104880, Length=262, Percent_Identity=36.2595419847328, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI50541956, Length=266, Percent_Identity=36.4661654135338, Blast_Score=172, Evalue=8e-43, Organism=Homo sapiens, GI50541954, Length=266, Percent_Identity=36.4661654135338, Blast_Score=172, Evalue=9e-43, Organism=Homo sapiens, GI50541952, Length=266, Percent_Identity=36.4661654135338, Blast_Score=172, Evalue=9e-43, Organism=Homo sapiens, GI50541948, Length=266, Percent_Identity=36.4661654135338, Blast_Score=172, Evalue=9e-43, Organism=Escherichia coli, GI1788855, Length=490, Percent_Identity=64.4897959183673, Blast_Score=598, Evalue=1e-172, Organism=Escherichia coli, GI1786293, Length=237, Percent_Identity=34.1772151898734, Blast_Score=152, Evalue=6e-38, Organism=Caenorhabditis elegans, GI71994385, Length=474, Percent_Identity=37.7637130801688, Blast_Score=291, Evalue=5e-79, Organism=Caenorhabditis elegans, GI71994389, Length=420, Percent_Identity=40, Blast_Score=282, Evalue=4e-76, Organism=Caenorhabditis elegans, GI17560440, Length=239, Percent_Identity=34.7280334728033, Blast_Score=160, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6323585, Length=483, Percent_Identity=39.3374741200828, Blast_Score=347, Evalue=2e-96, Organism=Saccharomyces cerevisiae, GI6322012, Length=488, Percent_Identity=39.1393442622951, Blast_Score=343, Evalue=2e-95, Organism=Saccharomyces cerevisiae, GI6323464, Length=483, Percent_Identity=39.1304347826087, Blast_Score=334, Evalue=1e-92, Organism=Saccharomyces cerevisiae, GI6319352, Length=336, Percent_Identity=38.3928571428571, Blast_Score=254, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6319353, Length=119, Percent_Identity=42.8571428571429, Blast_Score=85, Evalue=2e-17, Organism=Drosophila melanogaster, GI24641071, Length=480, Percent_Identity=40.4166666666667, Blast_Score=344, Evalue=8e-95, Organism=Drosophila melanogaster, GI24641073, Length=480, Percent_Identity=40.4166666666667, Blast_Score=344, Evalue=8e-95, Organism=Drosophila melanogaster, GI28571163, Length=441, Percent_Identity=40.5895691609977, Blast_Score=310, Evalue=1e-84,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 52050; Mature: 52050
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIIEKAYTFDDVLLVPAHSEVLPRDVALSTKLTRNITLNLPLVSAAMDTVTEARLAIAM CCCHHHHCCCCCEEEEECCCCCCCCHHHHHHEEECEEEEECCHHHHHHHHHHHHHHEEEE AQEGGIGIVHKNMSVEKQAAEVSKVKRHESGVVKDPITIAPDMLVRDLVLLTRQYKISGL ECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC PVIEAGKVVGIVTNRDLRFETRLDQTVGSIMTPRERLITVKEGASIDEARELMHTHRLER CEEECCCEEEEEECCCEEEHHHHHHHHHHHCCCHHHEEEEECCCCHHHHHHHHHHHHHCE VLVINDAWELKGLITVKDIIKTSEHPNANKDSQGRLRVGAAVGTGADTEERVKALVAAGV EEEEECCHHHCEEEEHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCC DVIVVDTAHGHSQGVLERVRWVKQNFPQVDVIGGNIATAQAALDLVKAGADGVKVGIGPG CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCC SICTTRIVAGVGVPQLTAIHNVSEALKGTGVPMIADGGIRFSGDIAKALAAGGNAVMLGG CHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCEEECCHHHHHHHCCCCEEEEEE MFAGTEEAPGEVELFQGRSYKSYRGMGSLGAMSQGSADRYFQESSNAADKFVPEGIEGRV EECCCCCCCCCEEEECCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHCCCCCCCCC PYKGPIAQVIHQLVGGLRSSMGYLGCPSIDQLHQKAQFVEITSAGIRESHVHDVQITKEA CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEEHHCCCCCCCCEEEEEEECC PNYHVER CCCCCCC >Mature Secondary Structure MRIIEKAYTFDDVLLVPAHSEVLPRDVALSTKLTRNITLNLPLVSAAMDTVTEARLAIAM CCCHHHHCCCCCEEEEECCCCCCCCHHHHHHEEECEEEEECCHHHHHHHHHHHHHHEEEE AQEGGIGIVHKNMSVEKQAAEVSKVKRHESGVVKDPITIAPDMLVRDLVLLTRQYKISGL ECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC PVIEAGKVVGIVTNRDLRFETRLDQTVGSIMTPRERLITVKEGASIDEARELMHTHRLER CEEECCCEEEEEECCCEEEHHHHHHHHHHHCCCHHHEEEEECCCCHHHHHHHHHHHHHCE VLVINDAWELKGLITVKDIIKTSEHPNANKDSQGRLRVGAAVGTGADTEERVKALVAAGV EEEEECCHHHCEEEEHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCC DVIVVDTAHGHSQGVLERVRWVKQNFPQVDVIGGNIATAQAALDLVKAGADGVKVGIGPG CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCC SICTTRIVAGVGVPQLTAIHNVSEALKGTGVPMIADGGIRFSGDIAKALAAGGNAVMLGG CHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCEEECCHHHHHHHCCCCEEEEEE MFAGTEEAPGEVELFQGRSYKSYRGMGSLGAMSQGSADRYFQESSNAADKFVPEGIEGRV EECCCCCCCCCEEEECCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHCCCCCCCCC PYKGPIAQVIHQLVGGLRSSMGYLGCPSIDQLHQKAQFVEITSAGIRESHVHDVQITKEA CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEEHHCCCCCCCCEEEEEEECC PNYHVER CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA