| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496672
Identifier: 34496672
GI number: 34496672
Start: 1279569
End: 1279976
Strand: Reverse
Name: 34496672
Synonym: CV_1217
Alternate gene names: NA
Gene position: 1279976-1279569 (Counterclockwise)
Preceding gene: 34496673
Following gene: 34496671
Centisome position: 26.94
GC content: 47.3
Gene sequence:
>408_bases ATGAACACACAGGAGCTGAATTTAACAAGCGAACTGGCACGGCTTTTGTACTATACGGCTCACATTGCGACCACCATCCG ACAGCGTAGTAGGCAAGCCACCGGCCGCACTCACCGCTTAAAAAATGGTAAAGATATTTGGCAGCTCGCGGATACGCTAC ACAACTTTGACCTGCTGGGCCATGCCATCCTGGCTAACAATCCCCAAACCATGTTGCGGGTTTGCGATTTATTGCTAAAG GACTACCAACGCTACATTGAGCGCTATGCAGTGCCGCTTGCCAATGTAGAAATTTCCGGAAATATAAAAGCAGGAAACTA TATGGTGGATTTGCAGGAAGGCATGGAAATTATTACGGAAATAAAAACCAGGGTTAGACCATTCACCAAGATGGCGAGCG CGCATTAA
Upstream 100 bases:
>100_bases ACTTACTCGACTTATTGATGGCTTAGCAAGCGCAGTCAGCTGGACTGGCGGTAACCGGACAGACAGATGGATTAAAAACT AATAAAACGAGGTGCGGATA
Downstream 100 bases:
>100_bases GGTGGCTGACCTTATACCCATTTCAATCACATTTTGATTTCTACCCTTGCCCCATTGCTGCACATGGGGCTTTTTTTCGC TCGGCTTATCTGCTCAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MNTQELNLTSELARLLYYTAHIATTIRQRSRQATGRTHRLKNGKDIWQLADTLHNFDLLGHAILANNPQTMLRVCDLLLK DYQRYIERYAVPLANVEISGNIKAGNYMVDLQEGMEIITEIKTRVRPFTKMASAH
Sequences:
>Translated_135_residues MNTQELNLTSELARLLYYTAHIATTIRQRSRQATGRTHRLKNGKDIWQLADTLHNFDLLGHAILANNPQTMLRVCDLLLK DYQRYIERYAVPLANVEISGNIKAGNYMVDLQEGMEIITEIKTRVRPFTKMASAH >Mature_135_residues MNTQELNLTSELARLLYYTAHIATTIRQRSRQATGRTHRLKNGKDIWQLADTLHNFDLLGHAILANNPQTMLRVCDLLLK DYQRYIERYAVPLANVEISGNIKAGNYMVDLQEGMEIITEIKTRVRPFTKMASAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15527; Mature: 15527
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTQELNLTSELARLLYYTAHIATTIRQRSRQATGRTHRLKNGKDIWQLADTLHNFDLLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHH HAILANNPQTMLRVCDLLLKDYQRYIERYAVPLANVEISGNIKAGNYMVDLQEGMEIITE HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEECCCEEEEHHHHHHHHHH IKTRVRPFTKMASAH HHHHHHHHHHHHCCC >Mature Secondary Structure MNTQELNLTSELARLLYYTAHIATTIRQRSRQATGRTHRLKNGKDIWQLADTLHNFDLLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHH HAILANNPQTMLRVCDLLLKDYQRYIERYAVPLANVEISGNIKAGNYMVDLQEGMEIITE HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEECCCEEEEHHHHHHHHHH IKTRVRPFTKMASAH HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA