| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34496671
Identifier: 34496671
GI number: 34496671
Start: 1278225
End: 1279190
Strand: Reverse
Name: 34496671
Synonym: CV_1216
Alternate gene names: NA
Gene position: 1279190-1278225 (Counterclockwise)
Preceding gene: 34496672
Following gene: 34496670
Centisome position: 26.92
GC content: 61.49
Gene sequence:
>966_bases ATGGAGTTCGATATGTCGCATTTAGTGGAAACTATGGCCTATGTCGGCCAAACCCCTTGGCATGGCTTGGGCAACTGCCT GCCGGCTGGGCAGCCTGTCGAGGTCTGGCAGCGCGAGGCGGGACTGGATTGGTCGATCCAGGAAGCGGAAGTACTGTTCA ACACCGCTGCCGATGCCATCCACATCCGCTCTCACAGCGATGCCAAAGTGCTGTATCGCTCGGATACGCTGGCGCCGCTG TCGGTCGTTTCCAGCCGCTACCAAGTGGTGCAGCCACAGGAGGTGCTGCATTTCTATAACGACCTGGTTCATGCAGGCGG CTTTGAGCTGGAAACGGCCGGCATGCTCAAGGGCGGCCGCAAGTTGTGGGCGCTGGCGCGTACTGGACAGGGTACGCAGG TCAAAGGCCTGGATCAGGTCAATGCTTACTTGCTGCTGGCCACCAGCTGCGATGGCACGCTTTGCACCACCGCGCAGTTC ACCTCGGTGCGCGTGGTCTGCAACAACACGCTGCAGTTTGTCGTCGGCCGCGAAGGCGGCGGCGTCAAAGTGCCGCATTC CACCCGTTTTGATCCGAAGTTGGTCAAGGAGTCGCTGGGCATCGGTTTGTCCGCCTGGGATCGCTTCATTGTCGATATCA AGCAATTGGCCAACCGTCCCATCTCGCCCGATGAGGCCAAACAGTATTTCAGCGCTGTGCTGCGCGAGCCGGCGATGGCG TCGCCGGATGACCCGGTTTCACGCGCCATGCAGCAAGTCACCTCGCTGTATGCCGGCGAAGGACGCGGCGCGCTGCTGCC CGGTAGTCGCGGCACCGCCTGGGGCCTGCTGAACTCAGTAACTGAATACGTGGATCACCGCCGCCGCTCCCGCAGCCAGG ATCACCGGCTGGATTCCGCCTGGTTCGGCCTGGGCGCGCAGCTGAAAGAAAACGCCCTCAAACACGCTTTACTGCTGCTG GACTGA
Upstream 100 bases:
>100_bases AGATTTTTTCAACTACATATCATCGACTTGAACTGGGCTTGATTTGTCCCAAACGTTCTCATCTTTCCCCTTCATCCATT TGAATGGATGAAGCCCCCTC
Downstream 100 bases:
>100_bases CCCATTCTCTTCCCTCGCTCCCCTGCTCTGGCCTGGCCAGACAGGGGATTTTTTATGCCCGTCATTTGGAGATCTCTTTA TGCATCACCACATCGAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage/Plasmid-Like Protein; Phage/Plasmid-Like Protein TIGR; Phage/Plasmid-Related Protein Tigr; Phage/Plasmid-Related Protein
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MEFDMSHLVETMAYVGQTPWHGLGNCLPAGQPVEVWQREAGLDWSIQEAEVLFNTAADAIHIRSHSDAKVLYRSDTLAPL SVVSSRYQVVQPQEVLHFYNDLVHAGGFELETAGMLKGGRKLWALARTGQGTQVKGLDQVNAYLLLATSCDGTLCTTAQF TSVRVVCNNTLQFVVGREGGGVKVPHSTRFDPKLVKESLGIGLSAWDRFIVDIKQLANRPISPDEAKQYFSAVLREPAMA SPDDPVSRAMQQVTSLYAGEGRGALLPGSRGTAWGLLNSVTEYVDHRRRSRSQDHRLDSAWFGLGAQLKENALKHALLLL D
Sequences:
>Translated_321_residues MEFDMSHLVETMAYVGQTPWHGLGNCLPAGQPVEVWQREAGLDWSIQEAEVLFNTAADAIHIRSHSDAKVLYRSDTLAPL SVVSSRYQVVQPQEVLHFYNDLVHAGGFELETAGMLKGGRKLWALARTGQGTQVKGLDQVNAYLLLATSCDGTLCTTAQF TSVRVVCNNTLQFVVGREGGGVKVPHSTRFDPKLVKESLGIGLSAWDRFIVDIKQLANRPISPDEAKQYFSAVLREPAMA SPDDPVSRAMQQVTSLYAGEGRGALLPGSRGTAWGLLNSVTEYVDHRRRSRSQDHRLDSAWFGLGAQLKENALKHALLLL D >Mature_321_residues MEFDMSHLVETMAYVGQTPWHGLGNCLPAGQPVEVWQREAGLDWSIQEAEVLFNTAADAIHIRSHSDAKVLYRSDTLAPL SVVSSRYQVVQPQEVLHFYNDLVHAGGFELETAGMLKGGRKLWALARTGQGTQVKGLDQVNAYLLLATSCDGTLCTTAQF TSVRVVCNNTLQFVVGREGGGVKVPHSTRFDPKLVKESLGIGLSAWDRFIVDIKQLANRPISPDEAKQYFSAVLREPAMA SPDDPVSRAMQQVTSLYAGEGRGALLPGSRGTAWGLLNSVTEYVDHRRRSRSQDHRLDSAWFGLGAQLKENALKHALLLL D
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35256; Mature: 35256
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFDMSHLVETMAYVGQTPWHGLGNCLPAGQPVEVWQREAGLDWSIQEAEVLFNTAADAI CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCEE HIRSHSDAKVLYRSDTLAPLSVVSSRYQVVQPQEVLHFYNDLVHAGGFELETAGMLKGGR EEECCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEHHHHHHCCC KLWALARTGQGTQVKGLDQVNAYLLLATSCDGTLCTTAQFTSVRVVCNNTLQFVVGREGG EEEEEEECCCCCEECCHHHCCEEEEEEECCCCCEEECCHHHEEEEEECCCEEEEEECCCC GVKVPHSTRFDPKLVKESLGIGLSAWDRFIVDIKQLANRPISPDEAKQYFSAVLREPAMA CEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC SPDDPVSRAMQQVTSLYAGEGRGALLPGSRGTAWGLLNSVTEYVDHRRRSRSQDHRLDSA CCCCHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCHHH WFGLGAQLKENALKHALLLLD HHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MEFDMSHLVETMAYVGQTPWHGLGNCLPAGQPVEVWQREAGLDWSIQEAEVLFNTAADAI CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCEE HIRSHSDAKVLYRSDTLAPLSVVSSRYQVVQPQEVLHFYNDLVHAGGFELETAGMLKGGR EEECCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEHHHHHHCCC KLWALARTGQGTQVKGLDQVNAYLLLATSCDGTLCTTAQFTSVRVVCNNTLQFVVGREGG EEEEEEECCCCCEECCHHHCCEEEEEEECCCCCEEECCHHHEEEEEECCCEEEEEECCCC GVKVPHSTRFDPKLVKESLGIGLSAWDRFIVDIKQLANRPISPDEAKQYFSAVLREPAMA CEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC SPDDPVSRAMQQVTSLYAGEGRGALLPGSRGTAWGLLNSVTEYVDHRRRSRSQDHRLDSA CCCCHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCHHH WFGLGAQLKENALKHALLLLD HHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA