| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34496670
Identifier: 34496670
GI number: 34496670
Start: 1277651
End: 1278145
Strand: Reverse
Name: 34496670
Synonym: CV_1215
Alternate gene names: NA
Gene position: 1278145-1277651 (Counterclockwise)
Preceding gene: 34496671
Following gene: 34496669
Centisome position: 26.9
GC content: 62.02
Gene sequence:
>495_bases ATGCATCACCACATCGAAACGCTGGACGGCCGCGTTTGTCCCGCTCAAGACGCCACCGGCATCCGCCAATGGCTTGCCGA TCTGCTATCTGGCTCGCACCAAGCGGCTCCGGCCACGCTGCTATTGAGCATCAACAAGCTGCCGCAAACCGGCGCCTGGT TGCTGAATCAACTGCGCACCGCCGAACTCAATGATCAGCTGCGCGCGGGATTGCCGTTCTCCACGCACAGCTTGGGCCAA GTGTGCTGCACGCCAGGCTTTGCCGCACTGGCCGAACCTGAGCGCTTCCTCGCCGCGATCCGGGCGGCCCACGTGTTCCA TGCCAGCAACGATCCTTATCTGGAGCACGACTTTGGCCAGGTGCAGATCGACGGCGATACCGTGTTCTGGAAGATCGACT ACTACGCGCTGGATAGCGAATTCGGCAGCGAAGCCCCCTGGGATGCCCAGCAAACGCGCCGAGTGCTGACCCTCATGCTG GCGGAGGAATACTGA
Upstream 100 bases:
>100_bases GCTTTACTGCTGCTGGACTGACCCATTCTCTTCCCTCGCTCCCCTGCTCTGGCCTGGCCAGACAGGGGATTTTTTATGCC CGTCATTTGGAGATCTCTTT
Downstream 100 bases:
>100_bases TGCCGACACTTCATCCACAAGCAGACGCACACTGGGTCATGGCCATCCCCGTGCTCTCCACCTCGCACATTCGCCAGCAA ACCCACGCTTGGTTGCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MHHHIETLDGRVCPAQDATGIRQWLADLLSGSHQAAPATLLLSINKLPQTGAWLLNQLRTAELNDQLRAGLPFSTHSLGQ VCCTPGFAALAEPERFLAAIRAAHVFHASNDPYLEHDFGQVQIDGDTVFWKIDYYALDSEFGSEAPWDAQQTRRVLTLML AEEY
Sequences:
>Translated_164_residues MHHHIETLDGRVCPAQDATGIRQWLADLLSGSHQAAPATLLLSINKLPQTGAWLLNQLRTAELNDQLRAGLPFSTHSLGQ VCCTPGFAALAEPERFLAAIRAAHVFHASNDPYLEHDFGQVQIDGDTVFWKIDYYALDSEFGSEAPWDAQQTRRVLTLML AEEY >Mature_164_residues MHHHIETLDGRVCPAQDATGIRQWLADLLSGSHQAAPATLLLSINKLPQTGAWLLNQLRTAELNDQLRAGLPFSTHSLGQ VCCTPGFAALAEPERFLAAIRAAHVFHASNDPYLEHDFGQVQIDGDTVFWKIDYYALDSEFGSEAPWDAQQTRRVLTLML AEEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18226; Mature: 18226
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHHIETLDGRVCPAQDATGIRQWLADLLSGSHQAAPATLLLSINKLPQTGAWLLNQLRT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH AELNDQLRAGLPFSTHSLGQVCCTPGFAALAEPERFLAAIRAAHVFHASNDPYLEHDFGQ HHHCHHHHCCCCCCCCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCEECCCCE VQIDGDTVFWKIDYYALDSEFGSEAPWDAQQTRRVLTLMLAEEY EEECCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MHHHIETLDGRVCPAQDATGIRQWLADLLSGSHQAAPATLLLSINKLPQTGAWLLNQLRT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH AELNDQLRAGLPFSTHSLGQVCCTPGFAALAEPERFLAAIRAAHVFHASNDPYLEHDFGQ HHHCHHHHCCCCCCCCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCEECCCCE VQIDGDTVFWKIDYYALDSEFGSEAPWDAQQTRRVLTLMLAEEY EEECCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA