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The map label for this gene is yhfM [C]

Identifier: 34496641

GI number: 34496641

Start: 1249033

End: 1250454

Strand: Reverse

Name: yhfM [C]

Synonym: CV_1186

Alternate gene names: 34496641

Gene position: 1250454-1249033 (Counterclockwise)

Preceding gene: 34496644

Following gene: 34496640

Centisome position: 26.32

GC content: 69.62

Gene sequence:

>1422_bases
ATGAACGCATCGACACCCGGCCTCGCGCGCAAGCTCGGCGGCTGGCAATTATGGGGCATCGCCGTCGGCCTGGTGATATC
CGGCGAATACTTCGGCTGGAGCTACGGCTGGGCGCAGGCCGGCCCCCTGGGCTTTCTGTGCGCGACGCTGTTCGTCGCGC
TGATGTACACCGCCTTCATCTTCAGCTTCACCGAGCTGACCACCGCCATCCCGCACGCCGGCGGGCCGTTCGCCTACGCC
CGCCGCGCCTTCGGCCCGCTGGGCGGCTTCGTCGCCGGCTTCGCCACCTTGTGCGAATTCGTGTTCGCCCCGCCGGCCAT
CGCGCTGGCGATAGGCGCGTATCTCAATGTGCAGTTCCCGTCGCTGGCGCCCAAGTGGAGCGCCTGCGGCGCCTACCTGG
TCTTCATGGCGCTGAACATCGCCGGGGTCGGCATCGCCGCGATGTTCGAGCTGGCGGTGACGCTGCTGGCCATCTTCGAA
CTCTTGGTGTTCATGGGCGTGGTGGCGCCGGGCTTCAGTTGGGCGCACTTCATGCACCAAGGCTGGGCCGGGCAGAACGC
CTTCCACTGGGGCGCGGTCGGCGGCATGTTCGCCGCCCTGCCGTTCGCGATCTGGTTCTTCCTGGCGATAGAGGGCGCGG
CGATGGCGGCCGAAGAGGCCAAAGACCCGGCGCGCACCATCCCGCGCGCCTACATCGCCGGCATCCTCACCCTGGTGGCG
CTGGCCTTCGGCGTGATGGTGATGGCCGGCGGCGCCGGCGACTGGAGCCGGCTGGCCAATATCAACGACCCGCTGCCGCA
GGCGATGAAGCAGATCGTCGGCGCGCACAGCGGCTGGCTGCACATGCTGGTGTGGCTGGGCCTGTTCGGCCTGGTGGCGT
CGTTCCACGGCATCATCATGGGCTATTCGCGGCAGATCTTCGCCCTGGCGCGGGCCGGCTACCTGCCGCGCGCGCTGGCC
GCCGTCCATCCGCGCTTCAAGACGCCGCACCGCGCCATCCTGGCCGGCGGCGCGGTCGGCATCGCCGCCATCTTCAGCGA
CGACTTGGTGCAGATCGCCGGCCAGCCGCTGACCGCCAACATCGTCACGCTGTCGGTGTTCGGCGCCATCGTCATGTACA
TCGTGTCGATGCTGGCGCTGTTCCGGCTGCGCGGCCGCGAGCCGGCGCTGCCCCGGCCGTTCTCCGCGCCCTGTTATCCG
TGGCTGCCGGCGCTGGCGCTGGGCTGTTCCGTCATCTGCCTGGTCGCCATGGTGTATTACAACCTGCTGCTGGCCGGCAT
CTTCGCCGCGATGCTGGCCGCCGGCTACCTGTATTTCCTCGCCACCGCCCGCCAGCGCGCCGCCGCCGCCGACGACGCGC
AGCTGCAAGGTTTGGCCGAGCCGCCAGCCGAGCCAGCCCCCTCCGTCCGGAGTCCGACATGA

Upstream 100 bases:

>100_bases
AATCGGCGGCGGACACTGGCATTCTTTTTGCATAAACGGGCGATGCGGGCATGCCCGCCCTTCCCCCGCGGAAGGCCATC
CAATCGGACAGGAGTCTGCC

Downstream 100 bases:

>100_bases
GCCACGCCATCGCCATAGGCCCGCGAACCTACCGCTTCGCCGACTTGAAAACGCTGCTGGCGCGCGCCAGTCCCCTGCGC
TCCGGCGACCAGCTGGCCGG

Product: ethanolamin permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MNASTPGLARKLGGWQLWGIAVGLVISGEYFGWSYGWAQAGPLGFLCATLFVALMYTAFIFSFTELTTAIPHAGGPFAYA
RRAFGPLGGFVAGFATLCEFVFAPPAIALAIGAYLNVQFPSLAPKWSACGAYLVFMALNIAGVGIAAMFELAVTLLAIFE
LLVFMGVVAPGFSWAHFMHQGWAGQNAFHWGAVGGMFAALPFAIWFFLAIEGAAMAAEEAKDPARTIPRAYIAGILTLVA
LAFGVMVMAGGAGDWSRLANINDPLPQAMKQIVGAHSGWLHMLVWLGLFGLVASFHGIIMGYSRQIFALARAGYLPRALA
AVHPRFKTPHRAILAGGAVGIAAIFSDDLVQIAGQPLTANIVTLSVFGAIVMYIVSMLALFRLRGREPALPRPFSAPCYP
WLPALALGCSVICLVAMVYYNLLLAGIFAAMLAAGYLYFLATARQRAAAADDAQLQGLAEPPAEPAPSVRSPT

Sequences:

>Translated_473_residues
MNASTPGLARKLGGWQLWGIAVGLVISGEYFGWSYGWAQAGPLGFLCATLFVALMYTAFIFSFTELTTAIPHAGGPFAYA
RRAFGPLGGFVAGFATLCEFVFAPPAIALAIGAYLNVQFPSLAPKWSACGAYLVFMALNIAGVGIAAMFELAVTLLAIFE
LLVFMGVVAPGFSWAHFMHQGWAGQNAFHWGAVGGMFAALPFAIWFFLAIEGAAMAAEEAKDPARTIPRAYIAGILTLVA
LAFGVMVMAGGAGDWSRLANINDPLPQAMKQIVGAHSGWLHMLVWLGLFGLVASFHGIIMGYSRQIFALARAGYLPRALA
AVHPRFKTPHRAILAGGAVGIAAIFSDDLVQIAGQPLTANIVTLSVFGAIVMYIVSMLALFRLRGREPALPRPFSAPCYP
WLPALALGCSVICLVAMVYYNLLLAGIFAAMLAAGYLYFLATARQRAAAADDAQLQGLAEPPAEPAPSVRSPT
>Mature_473_residues
MNASTPGLARKLGGWQLWGIAVGLVISGEYFGWSYGWAQAGPLGFLCATLFVALMYTAFIFSFTELTTAIPHAGGPFAYA
RRAFGPLGGFVAGFATLCEFVFAPPAIALAIGAYLNVQFPSLAPKWSACGAYLVFMALNIAGVGIAAMFELAVTLLAIFE
LLVFMGVVAPGFSWAHFMHQGWAGQNAFHWGAVGGMFAALPFAIWFFLAIEGAAMAAEEAKDPARTIPRAYIAGILTLVA
LAFGVMVMAGGAGDWSRLANINDPLPQAMKQIVGAHSGWLHMLVWLGLFGLVASFHGIIMGYSRQIFALARAGYLPRALA
AVHPRFKTPHRAILAGGAVGIAAIFSDDLVQIAGQPLTANIVTLSVFGAIVMYIVSMLALFRLRGREPALPRPFSAPCYP
WLPALALGCSVICLVAMVYYNLLLAGIFAAMLAAGYLYFLATARQRAAAADDAQLQGLAEPPAEPAPSVRSPT

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI115648063, Length=385, Percent_Identity=25.1948051948052, Blast_Score=66, Evalue=8e-11,
Organism=Homo sapiens, GI115648022, Length=385, Percent_Identity=25.1948051948052, Blast_Score=66, Evalue=8e-11,
Organism=Escherichia coli, GI87082250, Length=458, Percent_Identity=25.9825327510917, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI87081869, Length=481, Percent_Identity=24.5322245322245, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI87082023, Length=374, Percent_Identity=25.4010695187166, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1786602, Length=399, Percent_Identity=22.8070175438596, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1786302, Length=461, Percent_Identity=23.2104121475054, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=308, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24667468, Length=347, Percent_Identity=23.0547550432277, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI281366235, Length=408, Percent_Identity=24.5098039215686, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI116007820, Length=408, Percent_Identity=24.5098039215686, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI116007818, Length=408, Percent_Identity=25, Blast_Score=66, Evalue=7e-11,
Organism=Drosophila melanogaster, GI85725152, Length=408, Percent_Identity=25, Blast_Score=66, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50034; Mature: 50034

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]