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The map label for this gene is yfdH [C]

Identifier: 34496615

GI number: 34496615

Start: 1217846

End: 1218853

Strand: Reverse

Name: yfdH [C]

Synonym: CV_1160

Alternate gene names: 34496615

Gene position: 1218853-1217846 (Counterclockwise)

Preceding gene: 34496616

Following gene: 34496614

Centisome position: 25.65

GC content: 64.78

Gene sequence:

>1008_bases
ATGACCGACGCACGCAACTTCGTACCGCCCTACCTGCTGGAACTGCACGCCGCCGAACGGCCGGCCGACCCGCTGGTCAG
CTGCCTGATCCCGGCCTACAACGAGTCGGAAAACATCGTGCCGATGCTGGAGACGCTGCACCGGCTGCTGTCGGCGCACG
GCTATCGCCACGAACTGGTGGTGGTGGACGACGGCAGCCGCGACGACACCGTGCCCAAGGCGCTGGAAGCCGCCAAGCGG
CTGCCGGTGACGCTGATCCAGCTGTCGCGCAATTTCGGCAAGGAAATCGCGCTGACCGCCGGCATCGACAATATCGGCGG
CGATGTCGCGGTGCTGATAGACGGCGACTTCCAGCATCCGCCGGAAATGGTGCCGGTCTTCCTCGCCAAATGGCGCGAGG
GCTATGACATGGTCTACAGCGTGCGCGCCAACCGCGACGGCGAAACCCTGGCCAAGCGCGCGTTCACCCGCGTGTTCTAT
GCGCTGCTGAACAGCGGCGCGCCGCTGAAAATCCCGGAAAACACCCAGGATTTCCGGGTGCTGGACAAGAGCATCCTGGA
GGCGCTCAGGCGCATGCCGGAGCGCAACCGCTTCATGAAGGGCCTGTACAACTGGGTGGGCTTCACCCAGCTGGCGATGG
AGACGCAGACGCGGGAACGCCGCGCCGGCAAAAGCAGCTTCAATTTCCGCAGCCTGTTCAATCTGGGCCTGACCGGACTC
ACCGCCTTCTCCAACATGCCGCTGCGGATCTGGACCCTGGTCGGCTGCGTGATCTCGCTGCTGTCCATCGGCTACGCGAT
CTGGGAGCTGGTGCACACGCTGCTGTTCGGCAACCCGGTCAGCGGCTGGCCGACGCTGGCGGTCGCCGTCACCTTCCTCG
GCGGCGTGCAGCTGCTGTCCATCGGCATACTCGGCGAATACGTCGGCCGCATCTTCAACGAAGTCAAGGGCCGGCCTACC
TATTTGATCAGCCGCATCGCCAAACCCAGGGACGAGCGGGACGAATGA

Upstream 100 bases:

>100_bases
CCATCGCCGCGGGCTATCTGAAGGCCGGAGAGTTTCCGGTGATGAAAGACAGGATGTTGCTGCTCAAGCCGGCGACAGCC
CATTGACTGCGAAGACCACC

Downstream 100 bases:

>100_bases
AAAAGCAGTTGTTCTGGTTCGGCGTCGTCGGCGTATCGGCGATGCTGCTGCACTTCGCGCTGGTGACGCTGGTTCTGGTG
CCGCTGGGCGCGCCGCCGCT

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MTDARNFVPPYLLELHAAERPADPLVSCLIPAYNESENIVPMLETLHRLLSAHGYRHELVVVDDGSRDDTVPKALEAAKR
LPVTLIQLSRNFGKEIALTAGIDNIGGDVAVLIDGDFQHPPEMVPVFLAKWREGYDMVYSVRANRDGETLAKRAFTRVFY
ALLNSGAPLKIPENTQDFRVLDKSILEALRRMPERNRFMKGLYNWVGFTQLAMETQTRERRAGKSSFNFRSLFNLGLTGL
TAFSNMPLRIWTLVGCVISLLSIGYAIWELVHTLLFGNPVSGWPTLAVAVTFLGGVQLLSIGILGEYVGRIFNEVKGRPT
YLISRIAKPRDERDE

Sequences:

>Translated_335_residues
MTDARNFVPPYLLELHAAERPADPLVSCLIPAYNESENIVPMLETLHRLLSAHGYRHELVVVDDGSRDDTVPKALEAAKR
LPVTLIQLSRNFGKEIALTAGIDNIGGDVAVLIDGDFQHPPEMVPVFLAKWREGYDMVYSVRANRDGETLAKRAFTRVFY
ALLNSGAPLKIPENTQDFRVLDKSILEALRRMPERNRFMKGLYNWVGFTQLAMETQTRERRAGKSSFNFRSLFNLGLTGL
TAFSNMPLRIWTLVGCVISLLSIGYAIWELVHTLLFGNPVSGWPTLAVAVTFLGGVQLLSIGILGEYVGRIFNEVKGRPT
YLISRIAKPRDERDE
>Mature_334_residues
TDARNFVPPYLLELHAAERPADPLVSCLIPAYNESENIVPMLETLHRLLSAHGYRHELVVVDDGSRDDTVPKALEAAKRL
PVTLIQLSRNFGKEIALTAGIDNIGGDVAVLIDGDFQHPPEMVPVFLAKWREGYDMVYSVRANRDGETLAKRAFTRVFYA
LLNSGAPLKIPENTQDFRVLDKSILEALRRMPERNRFMKGLYNWVGFTQLAMETQTRERRAGKSSFNFRSLFNLGLTGLT
AFSNMPLRIWTLVGCVISLLSIGYAIWELVHTLLFGNPVSGWPTLAVAVTFLGGVQLLSIGILGEYVGRIFNEVKGRPTY
LISRIAKPRDERDE

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=181, Percent_Identity=29.2817679558011, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1788692, Length=305, Percent_Identity=41.9672131147541, Blast_Score=256, Evalue=1e-69,
Organism=Escherichia coli, GI1788588, Length=329, Percent_Identity=29.7872340425532, Blast_Score=170, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24585265, Length=173, Percent_Identity=30.635838150289, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 37575; Mature: 37444

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDARNFVPPYLLELHAAERPADPLVSCLIPAYNESENIVPMLETLHRLLSAHGYRHELV
CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
VVDDGSRDDTVPKALEAAKRLPVTLIQLSRNFGKEIALTAGIDNIGGDVAVLIDGDFQHP
EEECCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCC
PEMVPVFLAKWREGYDMVYSVRANRDGETLAKRAFTRVFYALLNSGAPLKIPENTQDFRV
HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHH
LDKSILEALRRMPERNRFMKGLYNWVGFTQLAMETQTRERRAGKSSFNFRSLFNLGLTGL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
TAFSNMPLRIWTLVGCVISLLSIGYAIWELVHTLLFGNPVSGWPTLAVAVTFLGGVQLLS
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
IGILGEYVGRIFNEVKGRPTYLISRIAKPRDERDE
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TDARNFVPPYLLELHAAERPADPLVSCLIPAYNESENIVPMLETLHRLLSAHGYRHELV
CCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
VVDDGSRDDTVPKALEAAKRLPVTLIQLSRNFGKEIALTAGIDNIGGDVAVLIDGDFQHP
EEECCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCC
PEMVPVFLAKWREGYDMVYSVRANRDGETLAKRAFTRVFYALLNSGAPLKIPENTQDFRV
HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHH
LDKSILEALRRMPERNRFMKGLYNWVGFTQLAMETQTRERRAGKSSFNFRSLFNLGLTGL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
TAFSNMPLRIWTLVGCVISLLSIGYAIWELVHTLLFGNPVSGWPTLAVAVTFLGGVQLLS
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
IGILGEYVGRIFNEVKGRPTYLISRIAKPRDERDE
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]