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The map label for this gene is arnT [H]

Identifier: 34496616

GI number: 34496616

Start: 1218868

End: 1220355

Strand: Reverse

Name: arnT [H]

Synonym: CV_1161

Alternate gene names: 34496616

Gene position: 1220355-1218868 (Counterclockwise)

Preceding gene: 34496617

Following gene: 34496615

Centisome position: 25.69

GC content: 68.75

Gene sequence:

>1488_bases
TTGAAAACAAGTTTACGGATGAATACCGCTGCCACTTCCTCCTGGCGGAAGGCGGCCGGCTACGCCTTGCTGGCGCTGCT
GGCCATCCGCCTGCTGGCGCTGTGGGCGATCCCGCTCACCGACACCACCGAGGCCCGCTACGCCGAGATCGCCCGCAAGA
TGCTGGAAACCGGCAATTGGGTGACGCCGCTGCACGACTACGGCGTGCCGTTCTGGGCCAAGCCGCCGCTGTCCACCTGG
CTGTCCGCAGCCAGCATGGGCCTGTTCGGCGTCAACGAGTTCGCCGCCCGCCTGCCCGCGCTGCTGCTGGCCATCGGCGC
GCTGTGGCTGACGGCAGATCTGATGCGCCGCCGCGCCGGCAACGACGCCGCGATGGCCGCCGCGCTGATCTTGGGCGGCG
GCCTGCTGTTCTACGGCGCGGCCGGCACCGTGATGACCGATCCCTCGCTGATGTTCTGCGTCACGCTGAGCCAGGTGGCG
TTCTGGCATGCGATGAGCGGCGGCGGCCGGCCGTGGCGTTACGCCTTCTTCGCCGGCCTGGGCCTGGGCCTGTTGGCCAA
GGGGCCGCTGGCCGTGGTGCTGGTGGGCATGCCCATCTTCGTCTGGGTATTGGTCCGCAATCAATGGAAAGCGCTGTGGC
GCGAGCTGCCCTGGATATCCGGCACCCTGCTCGCCGCGGCCATCGCCCTGCCCTGGTACACATGGGCGGAAATCCGCACG
CCGGGCTTTCTCAACTACTTCATCATGGGCGAACACGTCAGCCGCTTCCTGGACGCTGGCTGGAAGGGCGACAAGTACGG
CTTCGCCCACGCCACGCCGCGCGGCATGATCTGGCCTTATGCGCTGGGCGCGCTGTTTCCATGGTCCATCGCCATGCTGG
CCTGGCTGGCCAGCCGGGCGCGCCGACTGCCGGCCATCGTCCGCGCCGGCGAAAACGACGGCTGGCTGCTGTATGTCTCC
TTGTGGACCGTGATGACGCTGCTGTTCTTCACGATGTCCGGCAACATCATCTTCCCGTACTCGCTGCCGATGCTGCCCGG
CGCGGCGCTGCTGATGGCGGAGCTGTGGCATCGCGGCCGCGACGAGCGCGCCGGCCGCGCGCTGCCGTGGCTGGCGCTGT
CCTCCGGCCTGCTGGTGCTGGCGGCGATCGGCCTGCAATGGCATGACGGCGCCAGATATTTCCGCACCCAGAAGCCGGTG
ATAGCCGCCTGGCGCCAGCAGCAGCCCGCGCCGCAGGCGACGCTGTTCTACTGGGACAGCCGCCGCGAGTTCTCCGCGGA
GTTCTACAGCCAGGGCCGGGTGCGCACCACCGCCGACGCGCACGCGCTGGCCCCGCAGCTGGCAGCCCATCCGGGCAGCT
GGATCGTCACCGAGCAGCGCGACTTCGCCAGCCTGCCGCCGGCCATCGCCGCGGGCTATCTGAAGGCCGGAGAGTTTCCG
GTGATGAAAGACAGGATGTTGCTGCTCAAGCCGGCGACAGCCCATTGA

Upstream 100 bases:

>100_bases
CGATCCAAGCCAACGCCGCCTCCGGGCGGCGTTTTCGCTGGCGGGACGGAAGACGCCGGTCCCGGTCTGTGATAGCCTTG
CGCCGATCCTCTACCCCGTT

Downstream 100 bases:

>100_bases
CTGCGAAGACCACCATGACCGACGCACGCAACTTCGTACCGCCCTACCTGCTGGAACTGCACGCCGCCGAACGGCCGGCC
GACCCGCTGGTCAGCTGCCT

Product: melitin resistence protein

Products: NA

Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MKTSLRMNTAATSSWRKAAGYALLALLAIRLLALWAIPLTDTTEARYAEIARKMLETGNWVTPLHDYGVPFWAKPPLSTW
LSAASMGLFGVNEFAARLPALLLAIGALWLTADLMRRRAGNDAAMAAALILGGGLLFYGAAGTVMTDPSLMFCVTLSQVA
FWHAMSGGGRPWRYAFFAGLGLGLLAKGPLAVVLVGMPIFVWVLVRNQWKALWRELPWISGTLLAAAIALPWYTWAEIRT
PGFLNYFIMGEHVSRFLDAGWKGDKYGFAHATPRGMIWPYALGALFPWSIAMLAWLASRARRLPAIVRAGENDGWLLYVS
LWTVMTLLFFTMSGNIIFPYSLPMLPGAALLMAELWHRGRDERAGRALPWLALSSGLLVLAAIGLQWHDGARYFRTQKPV
IAAWRQQQPAPQATLFYWDSRREFSAEFYSQGRVRTTADAHALAPQLAAHPGSWIVTEQRDFASLPPAIAAGYLKAGEFP
VMKDRMLLLKPATAH

Sequences:

>Translated_495_residues
MKTSLRMNTAATSSWRKAAGYALLALLAIRLLALWAIPLTDTTEARYAEIARKMLETGNWVTPLHDYGVPFWAKPPLSTW
LSAASMGLFGVNEFAARLPALLLAIGALWLTADLMRRRAGNDAAMAAALILGGGLLFYGAAGTVMTDPSLMFCVTLSQVA
FWHAMSGGGRPWRYAFFAGLGLGLLAKGPLAVVLVGMPIFVWVLVRNQWKALWRELPWISGTLLAAAIALPWYTWAEIRT
PGFLNYFIMGEHVSRFLDAGWKGDKYGFAHATPRGMIWPYALGALFPWSIAMLAWLASRARRLPAIVRAGENDGWLLYVS
LWTVMTLLFFTMSGNIIFPYSLPMLPGAALLMAELWHRGRDERAGRALPWLALSSGLLVLAAIGLQWHDGARYFRTQKPV
IAAWRQQQPAPQATLFYWDSRREFSAEFYSQGRVRTTADAHALAPQLAAHPGSWIVTEQRDFASLPPAIAAGYLKAGEFP
VMKDRMLLLKPATAH
>Mature_495_residues
MKTSLRMNTAATSSWRKAAGYALLALLAIRLLALWAIPLTDTTEARYAEIARKMLETGNWVTPLHDYGVPFWAKPPLSTW
LSAASMGLFGVNEFAARLPALLLAIGALWLTADLMRRRAGNDAAMAAALILGGGLLFYGAAGTVMTDPSLMFCVTLSQVA
FWHAMSGGGRPWRYAFFAGLGLGLLAKGPLAVVLVGMPIFVWVLVRNQWKALWRELPWISGTLLAAAIALPWYTWAEIRT
PGFLNYFIMGEHVSRFLDAGWKGDKYGFAHATPRGMIWPYALGALFPWSIAMLAWLASRARRLPAIVRAGENDGWLLYVS
LWTVMTLLFFTMSGNIIFPYSLPMLPGAALLMAELWHRGRDERAGRALPWLALSSGLLVLAAIGLQWHDGARYFRTQKPV
IAAWRQQQPAPQATLFYWDSRREFSAEFYSQGRVRTTADAHALAPQLAAHPGSWIVTEQRDFASLPPAIAAGYLKAGEFP
VMKDRMLLLKPATAH

Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 83 family [H]

Homologues:

Organism=Escherichia coli, GI1788591, Length=322, Percent_Identity=28.8819875776398, Blast_Score=100, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022839
- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: =2.4.2.43 [H]

Molecular weight: Translated: 54722; Mature: 54722

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSLRMNTAATSSWRKAAGYALLALLAIRLLALWAIPLTDTTEARYAEIARKMLETGNW
CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
VTPLHDYGVPFWAKPPLSTWLSAASMGLFGVNEFAARLPALLLAIGALWLTADLMRRRAG
CCCHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NDAAMAAALILGGGLLFYGAAGTVMTDPSLMFCVTLSQVAFWHAMSGGGRPWRYAFFAGL
CHHHHHHHHHHHCCHHEECCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
GLGLLAKGPLAVVLVGMPIFVWVLVRNQWKALWRELPWISGTLLAAAIALPWYTWAEIRT
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCC
PGFLNYFIMGEHVSRFLDAGWKGDKYGFAHATPRGMIWPYALGALFPWSIAMLAWLASRA
CCCEEHEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RRLPAIVRAGENDGWLLYVSLWTVMTLLFFTMSGNIIFPYSLPMLPGAALLMAELWHRGR
HHCCHHEECCCCCCEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCC
DERAGRALPWLALSSGLLVLAAIGLQWHDGARYFRTQKPVIAAWRQQQPAPQATLFYWDS
CCCCCCCCCHHHHHCCHHHHHHHCCEECCCCHHHHCCCHHHHHHHCCCCCCCEEEEEECC
RREFSAEFYSQGRVRTTADAHALAPQLAAHPGSWIVTEQRDFASLPPAIAAGYLKAGEFP
CCHHHHHHHHCCCEEECCHHHHHHHHHHCCCCCEEEECCCCHHCCCHHHHHHHHCCCCCC
VMKDRMLLLKPATAH
CCCCCEEEECCCCCC
>Mature Secondary Structure
MKTSLRMNTAATSSWRKAAGYALLALLAIRLLALWAIPLTDTTEARYAEIARKMLETGNW
CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
VTPLHDYGVPFWAKPPLSTWLSAASMGLFGVNEFAARLPALLLAIGALWLTADLMRRRAG
CCCHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NDAAMAAALILGGGLLFYGAAGTVMTDPSLMFCVTLSQVAFWHAMSGGGRPWRYAFFAGL
CHHHHHHHHHHHCCHHEECCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
GLGLLAKGPLAVVLVGMPIFVWVLVRNQWKALWRELPWISGTLLAAAIALPWYTWAEIRT
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCC
PGFLNYFIMGEHVSRFLDAGWKGDKYGFAHATPRGMIWPYALGALFPWSIAMLAWLASRA
CCCEEHEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RRLPAIVRAGENDGWLLYVSLWTVMTLLFFTMSGNIIFPYSLPMLPGAALLMAELWHRGR
HHCCHHEECCCCCCEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCC
DERAGRALPWLALSSGLLVLAAIGLQWHDGARYFRTQKPVIAAWRQQQPAPQATLFYWDS
CCCCCCCCCHHHHHCCHHHHHHHCCEECCCCHHHHCCCHHHHHHHCCCCCCCEEEEEECC
RREFSAEFYSQGRVRTTADAHALAPQLAAHPGSWIVTEQRDFASLPPAIAAGYLKAGEFP
CCHHHHHHHHCCCEEECCHHHHHHHHHHCCCCCEEEECCCCHHCCCHHHHHHHHCCCCCC
VMKDRMLLLKPATAH
CCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA