| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496538
Identifier: 34496538
GI number: 34496538
Start: 1132894
End: 1133340
Strand: Reverse
Name: 34496538
Synonym: CV_1083
Alternate gene names: NA
Gene position: 1133340-1132894 (Counterclockwise)
Preceding gene: 34496539
Following gene: 34496533
Centisome position: 23.85
GC content: 64.88
Gene sequence:
>447_bases ATGAAATGGATAGCCACCGCCCTGTTGCTGCTTTCGCTTGCCGGATGCGGCAGCATGGGCCTGAAAAAGCCTGAAGTCAG CCTCAGCAATATCGAACCGGGCAGCAGCACGCTGTTCGAGCAGAACTTCGCGGTGACGCTGCGCGTCGCCAACCCCAATC CCATCCCGCTGAACGCCAGCGGCGTCGATTTCGAGCTGATGCTGGGCGGAGAAAAACTGGGCGGCGGCAGCAGCCAGCAA GCGGTGTCCATCCCCTCGCGCGGCGAAGGGATGGTGACCCTGCAGGTGCATACCTCGCTGGCCGCCTGGATACGCCAGCT GGCCAACTGGCGGCAGCTGCCGGGCGGCAAGCTCAACTACGAGCTGCGCGGCCAGCTGCACGGCCTGAACGGCCTGGCCG ACCTGCCGTTCAACAACAAGGGCGAATGGCAGCTGCCGCAGCGCTGA
Upstream 100 bases:
>100_bases CTTTTGGGCGTTCGTCCGCTAACAATTCCGCACATTCCGTTTACACAACGCCACAAGGCCTGCCCGTAAAATAGCGGACA TCTCAATCGGGAATGTCGTC
Downstream 100 bases:
>100_bases TCACTGCCGCGGCACCGCCAGGCAGTTGTTGCCGTCGAAGCTGACGCTCAGCACTTCCTTGGTTTTCTTGTCCACCACGA AGTTGGTGGTGCATTCGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKWIATALLLLSLAGCGSMGLKKPEVSLSNIEPGSSTLFEQNFAVTLRVANPNPIPLNASGVDFELMLGGEKLGGGSSQQ AVSIPSRGEGMVTLQVHTSLAAWIRQLANWRQLPGGKLNYELRGQLHGLNGLADLPFNNKGEWQLPQR
Sequences:
>Translated_148_residues MKWIATALLLLSLAGCGSMGLKKPEVSLSNIEPGSSTLFEQNFAVTLRVANPNPIPLNASGVDFELMLGGEKLGGGSSQQ AVSIPSRGEGMVTLQVHTSLAAWIRQLANWRQLPGGKLNYELRGQLHGLNGLADLPFNNKGEWQLPQR >Mature_148_residues MKWIATALLLLSLAGCGSMGLKKPEVSLSNIEPGSSTLFEQNFAVTLRVANPNPIPLNASGVDFELMLGGEKLGGGSSQQ AVSIPSRGEGMVTLQVHTSLAAWIRQLANWRQLPGGKLNYELRGQLHGLNGLADLPFNNKGEWQLPQR
Specific function: Unknown
COG id: COG5608
COG function: function code S; Conserved secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15890; Mature: 15890
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWIATALLLLSLAGCGSMGLKKPEVSLSNIEPGSSTLFEQNFAVTLRVANPNPIPLNAS CHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEECCEEEEEEECCCCCCCCCCC GVDFELMLGGEKLGGGSSQQAVSIPSRGEGMVTLQVHTSLAAWIRQLANWRQLPGGKLNY CCEEEEEECCCCCCCCCCCCEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEECE ELRGQLHGLNGLADLPFNNKGEWQLPQR EEEEEEECCCCEEECCCCCCCCEECCCC >Mature Secondary Structure MKWIATALLLLSLAGCGSMGLKKPEVSLSNIEPGSSTLFEQNFAVTLRVANPNPIPLNAS CHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEECCEEEEEEECCCCCCCCCCC GVDFELMLGGEKLGGGSSQQAVSIPSRGEGMVTLQVHTSLAAWIRQLANWRQLPGGKLNY CCEEEEEECCCCCCCCCCCCEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEECE ELRGQLHGLNGLADLPFNNKGEWQLPQR EEEEEEECCCCEEECCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA