Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34496514

Identifier: 34496514

GI number: 34496514

Start: 1105436

End: 1106800

Strand: Reverse

Name: 34496514

Synonym: CV_1059

Alternate gene names: NA

Gene position: 1106800-1105436 (Counterclockwise)

Preceding gene: 34496515

Following gene: 34496510

Centisome position: 23.3

GC content: 32.97

Gene sequence:

>1365_bases
ATGGAAAATCACGCCCTAACCTGCGAATGTGCTATTTGTAAAAATGAAAAAGATTTTGAGATATCAGAAGCACTTATTGA
CGAAATTAACTCACAAAAGGTTACGATATTTGCAGGTGCAGGCATTAGCACAGAATCTCGCATCGTTCTCAAAAATACAT
TTTATGATGATGTAGCACTAGAACTTTACAAAATCAATCCCCACTTAAGGGTCAAAGAACTTACATTTCCAAATCTAATG
CAAGCTCTAAAATCACAGCCTAATGGCAGGATAAAATTATTGGAAATGATAACTAAAAGATTCTCTCTAATAAAATCATT
TCCAGAACTCCGTAAAATGGCAACAAGATTCCATAGAGAATTAGGAACATTCTTCCCTATCAAGAATATCATCACAACCA
ATTGGGATACATTTTTTGAGGAGGAATGTAAGGCAACCCCATTTGTATTTGACCAAGACATAGCATTCTGGGAAGCCGCA
AAGAGAAGAGTATTAAAAATACACGGATCAGAAACCAATTTTGGATCGATTATTGCAGACGCCGATGATTACAAAAAATG
CACAAAAAATTTAAGCAAGGGAATAATAGGAAGCAAACTAAAAGACATTCTTGCAACGCAAACAATAATATTCATTGGAT
ACTCATTATCCGATTATGACTTTAACAGCATATATACTTTTGTTAGAAAACAAATGCGAGGTTTACACAAGCAAGCATAT
ATAGTAACGCCATTTGAAAATGAGATAGAAAAGTTTAGAAAAATTGGGCTAATTCCGATTATTACGGATGGAACGTATTT
TATTAAAAAATTAAAGCAACACCCTAAAATAGCCAGCCATTTTATAAAAGATTCATTTATAGAATTTTCCGCTCGGCTTT
TATATAAAACAAACATTCAACACAACAGACTTCATAGTGAAATTAATTTTCTCAATCAACCTGATGCAATCTATTCGGCA
TGTTATCAAGATGGATTAAAACACTCTCTAGAACGTGCAATTAATATGAGTGGGAACTCTGAATACTCTCATGCATGCGA
ACTAAAAGAAATTATAAACAAATACGAAGATATAAAAAATAAAATAATTAATCGTGGCATTTTCGAAGACATTGCATATA
TTGAAGGCTATATTAATGGACTAGTCGCCATTTATGAGCATGAAAAATTTACGGAAAATGACATCCCAATGTACTTTCAT
TTTTCAGAAAGTGAAAATAGCCCAAGTATTACTGATATCGAGCATTACAAAGAAAAAATTCACTCACTCACAAAGAATGA
TGAGTCATATCGCCATGCAGAAAAAGTTGTACAGCGATTAAAAGAAAATCCACTTTTAGAATATCATCACCCACCTTGGC
TGTAA

Upstream 100 bases:

>100_bases
TACATTGGGCTAAAGAGAAAGCCGCTCACTGCAAGGTGAGCGGCTTTTTTGCGACCTTTAAACGTAGCCTGTCCTATTTA
TCCATCAGAAATGGAATAAC

Downstream 100 bases:

>100_bases
GTCAGCTGAACCACGTAAAGCCCAAAGTTTACTACGCAATACCAATTAGTGTTGTGTCCGCTTCGCGGACAAATATTTAG
GCGCCGGTTCCGCCCGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MENHALTCECAICKNEKDFEISEALIDEINSQKVTIFAGAGISTESRIVLKNTFYDDVALELYKINPHLRVKELTFPNLM
QALKSQPNGRIKLLEMITKRFSLIKSFPELRKMATRFHRELGTFFPIKNIITTNWDTFFEEECKATPFVFDQDIAFWEAA
KRRVLKIHGSETNFGSIIADADDYKKCTKNLSKGIIGSKLKDILATQTIIFIGYSLSDYDFNSIYTFVRKQMRGLHKQAY
IVTPFENEIEKFRKIGLIPIITDGTYFIKKLKQHPKIASHFIKDSFIEFSARLLYKTNIQHNRLHSEINFLNQPDAIYSA
CYQDGLKHSLERAINMSGNSEYSHACELKEIINKYEDIKNKIINRGIFEDIAYIEGYINGLVAIYEHEKFTENDIPMYFH
FSESENSPSITDIEHYKEKIHSLTKNDESYRHAEKVVQRLKENPLLEYHHPPWL

Sequences:

>Translated_454_residues
MENHALTCECAICKNEKDFEISEALIDEINSQKVTIFAGAGISTESRIVLKNTFYDDVALELYKINPHLRVKELTFPNLM
QALKSQPNGRIKLLEMITKRFSLIKSFPELRKMATRFHRELGTFFPIKNIITTNWDTFFEEECKATPFVFDQDIAFWEAA
KRRVLKIHGSETNFGSIIADADDYKKCTKNLSKGIIGSKLKDILATQTIIFIGYSLSDYDFNSIYTFVRKQMRGLHKQAY
IVTPFENEIEKFRKIGLIPIITDGTYFIKKLKQHPKIASHFIKDSFIEFSARLLYKTNIQHNRLHSEINFLNQPDAIYSA
CYQDGLKHSLERAINMSGNSEYSHACELKEIINKYEDIKNKIINRGIFEDIAYIEGYINGLVAIYEHEKFTENDIPMYFH
FSESENSPSITDIEHYKEKIHSLTKNDESYRHAEKVVQRLKENPLLEYHHPPWL
>Mature_454_residues
MENHALTCECAICKNEKDFEISEALIDEINSQKVTIFAGAGISTESRIVLKNTFYDDVALELYKINPHLRVKELTFPNLM
QALKSQPNGRIKLLEMITKRFSLIKSFPELRKMATRFHRELGTFFPIKNIITTNWDTFFEEECKATPFVFDQDIAFWEAA
KRRVLKIHGSETNFGSIIADADDYKKCTKNLSKGIIGSKLKDILATQTIIFIGYSLSDYDFNSIYTFVRKQMRGLHKQAY
IVTPFENEIEKFRKIGLIPIITDGTYFIKKLKQHPKIASHFIKDSFIEFSARLLYKTNIQHNRLHSEINFLNQPDAIYSA
CYQDGLKHSLERAINMSGNSEYSHACELKEIINKYEDIKNKIINRGIFEDIAYIEGYINGLVAIYEHEKFTENDIPMYFH
FSESENSPSITDIEHYKEKIHSLTKNDESYRHAEKVVQRLKENPLLEYHHPPWL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52931; Mature: 52931

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENHALTCECAICKNEKDFEISEALIDEINSQKVTIFAGAGISTESRIVLKNTFYDDVAL
CCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCEE
ELYKINPHLRVKELTFPNLMQALKSQPNGRIKLLEMITKRFSLIKSFPELRKMATRFHRE
EEEEECCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGTFFPIKNIITTNWDTFFEEECKATPFVFDQDIAFWEAAKRRVLKIHGSETNFGSIIAD
HHCCCCHHHHHHCCCHHHHHHHHCCCCCEECCCHHHHHHHCCCEEEEECCCCCCCCEEEC
ADDYKKCTKNLSKGIIGSKLKDILATQTIIFIGYSLSDYDFNSIYTFVRKQMRGLHKQAY
CHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCEE
IVTPFENEIEKFRKIGLIPIITDGTYFIKKLKQHPKIASHFIKDSFIEFSARLLYKTNIQ
EECCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
HNRLHSEINFLNQPDAIYSACYQDGLKHSLERAINMSGNSEYSHACELKEIINKYEDIKN
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
KIINRGIFEDIAYIEGYINGLVAIYEHEKFTENDIPMYFHFSESENSPSITDIEHYKEKI
HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
HSLTKNDESYRHAEKVVQRLKENPLLEYHHPPWL
HHHHCCCHHHHHHHHHHHHHHHCCCEECCCCCCC
>Mature Secondary Structure
MENHALTCECAICKNEKDFEISEALIDEINSQKVTIFAGAGISTESRIVLKNTFYDDVAL
CCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCEE
ELYKINPHLRVKELTFPNLMQALKSQPNGRIKLLEMITKRFSLIKSFPELRKMATRFHRE
EEEEECCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGTFFPIKNIITTNWDTFFEEECKATPFVFDQDIAFWEAAKRRVLKIHGSETNFGSIIAD
HHCCCCHHHHHHCCCHHHHHHHHCCCCCEECCCHHHHHHHCCCEEEEECCCCCCCCEEEC
ADDYKKCTKNLSKGIIGSKLKDILATQTIIFIGYSLSDYDFNSIYTFVRKQMRGLHKQAY
CHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCEE
IVTPFENEIEKFRKIGLIPIITDGTYFIKKLKQHPKIASHFIKDSFIEFSARLLYKTNIQ
EECCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
HNRLHSEINFLNQPDAIYSACYQDGLKHSLERAINMSGNSEYSHACELKEIINKYEDIKN
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
KIINRGIFEDIAYIEGYINGLVAIYEHEKFTENDIPMYFHFSESENSPSITDIEHYKEKI
HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
HSLTKNDESYRHAEKVVQRLKENPLLEYHHPPWL
HHHHCCCHHHHHHHHHHHHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA