| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34496490
Identifier: 34496490
GI number: 34496490
Start: 1084262
End: 1084684
Strand: Reverse
Name: 34496490
Synonym: CV_1035
Alternate gene names: NA
Gene position: 1084684-1084262 (Counterclockwise)
Preceding gene: 34496491
Following gene: 34496487
Centisome position: 22.83
GC content: 68.09
Gene sequence:
>423_bases ATGACCGCGGCGGCGCTGGTCGCCGCCTCCCTGACCAGCCTGCCCAGCCAGGCCGGCGTATCCATCAGCGTCGGCGAGCC CGGCTTCTACGGCCAGATAGACATAGGCGGCTATCCCCAGCCGCAGCTCGTCTACCCGCAGCCGGTTATCGTCCAGCCGG CCGTCACCGTCCTGCCGCCCTTGTATCTGCGCGTGCCGCCGGGGCACATCAAACACTGGGACCGTTACTGCCGCGGCTAC GGCGCCTGCGGCCGCCAGGTCTATTTCGTCCGCGACGACTGGTACAACCGCGTCTACGTGCCGCACTACCGCGAATACCA TCACGACAACGGCCGGCATGAGGGATGGAAGCACGAGCGCCACGACGACCACCGAGACGAGTGGCACGGCGACGAGTGGC ACGGCGACCGCCACGAGCACTGA
Upstream 100 bases:
>100_bases CTATCTTTCCTTTGCGCTTGCGAAACAAAACGGGGCCATAGTGCAAGCATGGGCGATGCCTGCTCGTTTATGTAAAAGGA AGACTGCCATGAAACACGTG
Downstream 100 bases:
>100_bases TCTTGGCGCCTACTGGCCCGCATTGAGTCCGGCCAGCGCCGCATCATCCGCCAGCCTGGCGGCGAACGCGTCGCCAGGCA TGGGCCGGCCCAGCCAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTAAALVAASLTSLPSQAGVSISVGEPGFYGQIDIGGYPQPQLVYPQPVIVQPAVTVLPPLYLRVPPGHIKHWDRYCRGY GACGRQVYFVRDDWYNRVYVPHYREYHHDNGRHEGWKHERHDDHRDEWHGDEWHGDRHEH
Sequences:
>Translated_140_residues MTAAALVAASLTSLPSQAGVSISVGEPGFYGQIDIGGYPQPQLVYPQPVIVQPAVTVLPPLYLRVPPGHIKHWDRYCRGY GACGRQVYFVRDDWYNRVYVPHYREYHHDNGRHEGWKHERHDDHRDEWHGDEWHGDRHEH >Mature_139_residues TAAALVAASLTSLPSQAGVSISVGEPGFYGQIDIGGYPQPQLVYPQPVIVQPAVTVLPPLYLRVPPGHIKHWDRYCRGYG ACGRQVYFVRDDWYNRVYVPHYREYHHDNGRHEGWKHERHDDHRDEWHGDEWHGDRHEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16231; Mature: 16100
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAALVAASLTSLPSQAGVSISVGEPGFYGQIDIGGYPQPQLVYPQPVIVQPAVTVLPP CCHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEECCCCCCCCEECCCCEEECCHHHHCCC LYLRVPPGHIKHWDRYCRGYGACGRQVYFVRDDWYNRVYVPHYREYHHDNGRHEGWKHER EEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCHHHHCCCCCCCCCCCCCC HDDHRDEWHGDEWHGDRHEH CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAAALVAASLTSLPSQAGVSISVGEPGFYGQIDIGGYPQPQLVYPQPVIVQPAVTVLPP CHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEECCCCCCCCEECCCCEEECCHHHHCCC LYLRVPPGHIKHWDRYCRGYGACGRQVYFVRDDWYNRVYVPHYREYHHDNGRHEGWKHER EEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCHHHHCCCCCCCCCCCCCC HDDHRDEWHGDEWHGDRHEH CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA