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The map label for this gene is flhF [H]

Identifier: 34496479

GI number: 34496479

Start: 1067787

End: 1069226

Strand: Reverse

Name: flhF [H]

Synonym: CV_1024

Alternate gene names: 34496479

Gene position: 1069226-1067787 (Counterclockwise)

Preceding gene: 34496480

Following gene: 34496478

Centisome position: 22.5

GC content: 69.24

Gene sequence:

>1440_bases
ATGGTGGTGAAAAAGTTCTTCGGGAAAACCACTCGAGACGCACTCCGGCAAGTTCGCGAAGAACTGGGTGCGGACGCCCT
CATTTTGTCCAATCGCCCGACCATGGGCGGCGGCGTGGAAATCATGGCGGTGGCGGACGCCGACGTCGCCAACCTGGCCA
GCACGCTGTCCACCTCCAGCAGCAAGCATCCGCCGCGCAACGCGCCGCCGGCGGTCAACCGGCCGCAGCAGCCGGCGCCC
ATTCCCCAGGCCAACGGCAGCGCGATGAACCGCGCCATCGCCCGCACTTACGCGATGCCGGTGGAGCCGCTGGAAAGCCC
GGCCCCGCCGCGGCTGGACGCCGCGCCGCCGCGCGTGGAGCCGACCTACGCCCCGCCGCAACCCGTCGCCCAGCCCCTCA
TGCAGCCGGCGGCGCAGCCCATTCCCCGCGCCGCGCCGCGCCCGCCGGCGCCGGAGCCCGCCGCGCCTCACGCCAACGGC
GAGGAGCAGGAACAGATGGCCCAGGAACTCAGGCAGATCGGCGACGAGATCAAGCTGCTCAGGAGCCTGCTGCAAAGCCA
GCTGGCCAGCTTCGCCTGGTCGGACATGGAAGGCAAGGCGCCCAACCGGCTGGAATTGTTCAAGCACCTGCTGGCCATGG
GCTTCTCCGCCCAACTGATCCGCCAGCTGATAGAAAAGATGCCGGCGCAGTACCAAGCCGAGGTCGCGGTGAAATGGGCG
CGCTCGGCGCTGGCGCACAATCTGAAGTGCGCGGACGCCGACCGCGAGGTGATGGACCGCGGCGGCATCTTCGCGCTGGT
CGGCCCCACCGGCGTCGGCAAGACCACCACCGTGGCCAAGCTGGCCGCGCGCGCGACGATGCGCTTCGGCGCCCAGCACG
TGGCGCTGATCACCACCGACAGCTACCGGATCGGCGCGCAGGACCAGCTGCGCATCTACGGCAAGATCCTTGGCGTGCCG
GTGTTCTCCATCCAGAACGAGGGCGATCTGCAGTTGACGCTGGCCGACCTGTCCAACCGCCACATCGTGTTCATCGACAC
CGTGGGCATGGGCCAGCGCGACGCGCGCGTGCTGGCGCAGATCGACATGCTGCGCACCGCCGGCCGCCCGATCGAGCGGC
TGCTGCTGCTGGCCGCCAACACCGACGGCCACACGCTGGAGGACGTGGTGAAGCGCTACCGCGGCGACGGCCTCGCCGGC
TGCATCCTGTCCAAGATAGACGAGGCGGTGGCCCAGGGGCCCAGCCTGGACGTGATCATCCGCAACCGGCTCAAGCTCTA
CTACGTCACCAACGGCCAGCGCGTGCCGGAAGACCTGCATTCCGCCAACGCCGCCTTCTTGGTCGACCGCGCGATGCGCG
CCCAGCAGATCGCCTCGCCGTTCGCGCTGCAGGCCGATGAGATGTCCATCATGCAGGCGGCGCAGGCCGGATGGCTATGA

Upstream 100 bases:

>100_bases
CCGCAGTTGCGCGTGATTTCGCATAATGAGATTCCGGACAATAAATCCATTCGTATAATTGCGGTAATCGGCGGCAGCAA
GGGCTAAGGGCTAATCGACA

Downstream 100 bases:

>100_bases
ACGCCATGCAGGACCAGGCCGCCAGTCTCCGCCGGCTCGCCGCCCAGCGGCAGCGCGCGCCCAGCTTCGCCTTCATCGGC
TCCGAGCACGCCGGCACCAG

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MVVKKFFGKTTRDALRQVREELGADALILSNRPTMGGGVEIMAVADADVANLASTLSTSSSKHPPRNAPPAVNRPQQPAP
IPQANGSAMNRAIARTYAMPVEPLESPAPPRLDAAPPRVEPTYAPPQPVAQPLMQPAAQPIPRAAPRPPAPEPAAPHANG
EEQEQMAQELRQIGDEIKLLRSLLQSQLASFAWSDMEGKAPNRLELFKHLLAMGFSAQLIRQLIEKMPAQYQAEVAVKWA
RSALAHNLKCADADREVMDRGGIFALVGPTGVGKTTTVAKLAARATMRFGAQHVALITTDSYRIGAQDQLRIYGKILGVP
VFSIQNEGDLQLTLADLSNRHIVFIDTVGMGQRDARVLAQIDMLRTAGRPIERLLLLAANTDGHTLEDVVKRYRGDGLAG
CILSKIDEAVAQGPSLDVIIRNRLKLYYVTNGQRVPEDLHSANAAFLVDRAMRAQQIASPFALQADEMSIMQAAQAGWL

Sequences:

>Translated_479_residues
MVVKKFFGKTTRDALRQVREELGADALILSNRPTMGGGVEIMAVADADVANLASTLSTSSSKHPPRNAPPAVNRPQQPAP
IPQANGSAMNRAIARTYAMPVEPLESPAPPRLDAAPPRVEPTYAPPQPVAQPLMQPAAQPIPRAAPRPPAPEPAAPHANG
EEQEQMAQELRQIGDEIKLLRSLLQSQLASFAWSDMEGKAPNRLELFKHLLAMGFSAQLIRQLIEKMPAQYQAEVAVKWA
RSALAHNLKCADADREVMDRGGIFALVGPTGVGKTTTVAKLAARATMRFGAQHVALITTDSYRIGAQDQLRIYGKILGVP
VFSIQNEGDLQLTLADLSNRHIVFIDTVGMGQRDARVLAQIDMLRTAGRPIERLLLLAANTDGHTLEDVVKRYRGDGLAG
CILSKIDEAVAQGPSLDVIIRNRLKLYYVTNGQRVPEDLHSANAAFLVDRAMRAQQIASPFALQADEMSIMQAAQAGWL
>Mature_479_residues
MVVKKFFGKTTRDALRQVREELGADALILSNRPTMGGGVEIMAVADADVANLASTLSTSSSKHPPRNAPPAVNRPQQPAP
IPQANGSAMNRAIARTYAMPVEPLESPAPPRLDAAPPRVEPTYAPPQPVAQPLMQPAAQPIPRAAPRPPAPEPAAPHANG
EEQEQMAQELRQIGDEIKLLRSLLQSQLASFAWSDMEGKAPNRLELFKHLLAMGFSAQLIRQLIEKMPAQYQAEVAVKWA
RSALAHNLKCADADREVMDRGGIFALVGPTGVGKTTTVAKLAARATMRFGAQHVALITTDSYRIGAQDQLRIYGKILGVP
VFSIQNEGDLQLTLADLSNRHIVFIDTVGMGQRDARVLAQIDMLRTAGRPIERLLLLAANTDGHTLEDVVKRYRGDGLAG
CILSKIDEAVAQGPSLDVIIRNRLKLYYVTNGQRVPEDLHSANAAFLVDRAMRAQQIASPFALQADEMSIMQAAQAGWL

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 51889; Mature: 51889

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVKKFFGKTTRDALRQVREELGADALILSNRPTMGGGVEIMAVADADVANLASTLSTSS
CCCHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHCCC
SKHPPRNAPPAVNRPQQPAPIPQANGSAMNRAIARTYAMPVEPLESPAPPRLDAAPPRVE
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PTYAPPQPVAQPLMQPAAQPIPRAAPRPPAPEPAAPHANGEEQEQMAQELRQIGDEIKLL
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RSLLQSQLASFAWSDMEGKAPNRLELFKHLLAMGFSAQLIRQLIEKMPAQYQAEVAVKWA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH
RSALAHNLKCADADREVMDRGGIFALVGPTGVGKTTTVAKLAARATMRFGAQHVALITTD
HHHHHHCCCCCCCHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEC
SYRIGAQDQLRIYGKILGVPVFSIQNEGDLQLTLADLSNRHIVFIDTVGMGQRDARVLAQ
CEEECCCHHHHHHHHHHCCEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHH
IDMLRTAGRPIERLLLLAANTDGHTLEDVVKRYRGDGLAGCILSKIDEAVAQGPSLDVII
HHHHHHCCCCHHHHEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEE
RNRLKLYYVTNGQRVPEDLHSANAAFLVDRAMRAQQIASPFALQADEMSIMQAAQAGWL
ECCEEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVVKKFFGKTTRDALRQVREELGADALILSNRPTMGGGVEIMAVADADVANLASTLSTSS
CCCHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHCCC
SKHPPRNAPPAVNRPQQPAPIPQANGSAMNRAIARTYAMPVEPLESPAPPRLDAAPPRVE
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PTYAPPQPVAQPLMQPAAQPIPRAAPRPPAPEPAAPHANGEEQEQMAQELRQIGDEIKLL
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RSLLQSQLASFAWSDMEGKAPNRLELFKHLLAMGFSAQLIRQLIEKMPAQYQAEVAVKWA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH
RSALAHNLKCADADREVMDRGGIFALVGPTGVGKTTTVAKLAARATMRFGAQHVALITTD
HHHHHHCCCCCCCHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEC
SYRIGAQDQLRIYGKILGVPVFSIQNEGDLQLTLADLSNRHIVFIDTVGMGQRDARVLAQ
CEEECCCHHHHHHHHHHCCEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHH
IDMLRTAGRPIERLLLLAANTDGHTLEDVVKRYRGDGLAGCILSKIDEAVAQGPSLDVII
HHHHHHCCCCHHHHEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEE
RNRLKLYYVTNGQRVPEDLHSANAAFLVDRAMRAQQIASPFALQADEMSIMQAAQAGWL
ECCEEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]