Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34496445

Identifier: 34496445

GI number: 34496445

Start: 1026537

End: 1026956

Strand: Reverse

Name: 34496445

Synonym: CV_0990

Alternate gene names: NA

Gene position: 1026956-1026537 (Counterclockwise)

Preceding gene: 34496449

Following gene: 34496442

Centisome position: 21.62

GC content: 71.9

Gene sequence:

>420_bases
TTGAAGCCGAACAGGCCGCGCGCCAGGTTTTCCATCCGCTGCGCGGCCACGTCGCCGAACACCCGCGACAAATCCTCGCT
GGCGTGCCAGTGCAGCTGGCCGACGATGCGGCCCACCGCGGACGCCAGCTCGGCGTCGCCCTCCAGCGCGATGTCCGACA
GTTGCGGCGCCTGGCCGGTCAGATGCGACAGCACCGCGCCGTGGCGCAGCTTGAGCCTGGCCTCCGGCTCGCCGTCGCAG
GCGGCCAGCCAGCCCTCTTCCGTGATCACGCCGGCCACGTGCAAGGGCGGCAGCGCGATCGCCACCCGGCGGCCGGCATG
GGCGGCCAGCTCGGCGCGCCGCGCCGGATGCTGGTTCAGCAGGTGGTTGAAGGCTGCGATCTGGATGGCCATGGCGCGCT
CCCGCGTGATCAGAACTTGA

Upstream 100 bases:

>100_bases
GGCGACGAAGCGTTGAACCAGATGGCGGCTGGCCAGCAACGGCGCCTCTTCGCGCAGGTGCTCGATCCAGCCATCGGCCA
AGCGGAAAGCCAGCTGGCCC

Downstream 100 bases:

>100_bases
CGCCCTTGTGCAGCGCAACAACGCCGCCGGTCAGATTATGGTAGTCCACCTTGCCGAAGCCCGCGTCCAGCATCATCTGC
TTCAGCGTCTCCTGATCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKPNRPRARFSIRCAATSPNTRDKSSLACQCSWPTMRPTADASSASPSSAMSDSCGAWPVRCDSTAPWRSLSLASGSPSQ
AASQPSSVITPATCKGGSAIATRRPAWAASSARRAGCWFSRWLKAAIWMAMARSRVIRT

Sequences:

>Translated_139_residues
MKPNRPRARFSIRCAATSPNTRDKSSLACQCSWPTMRPTADASSASPSSAMSDSCGAWPVRCDSTAPWRSLSLASGSPSQ
AASQPSSVITPATCKGGSAIATRRPAWAASSARRAGCWFSRWLKAAIWMAMARSRVIRT
>Mature_139_residues
MKPNRPRARFSIRCAATSPNTRDKSSLACQCSWPTMRPTADASSASPSSAMSDSCGAWPVRCDSTAPWRSLSLASGSPSQ
AASQPSSVITPATCKGGSAIATRRPAWAASSARRAGCWFSRWLKAAIWMAMARSRVIRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14796; Mature: 14796

Theoretical pI: Translated: 12.05; Mature: 12.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPNRPRARFSIRCAATSPNTRDKSSLACQCSWPTMRPTADASSASPSSAMSDSCGAWPV
CCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCE
RCDSTAPWRSLSLASGSPSQAASQPSSVITPATCKGGSAIATRRPAWAASSARRAGCWFS
EECCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHH
RWLKAAIWMAMARSRVIRT
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKPNRPRARFSIRCAATSPNTRDKSSLACQCSWPTMRPTADASSASPSSAMSDSCGAWPV
CCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCE
RCDSTAPWRSLSLASGSPSQAASQPSSVITPATCKGGSAIATRRPAWAASSARRAGCWFS
EECCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHH
RWLKAAIWMAMARSRVIRT
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA