Click here to switch to the map view.

The map label for this gene is pilN

Identifier: 34496287

GI number: 34496287

Start: 859285

End: 859860

Strand: Reverse

Name: pilN

Synonym: CV_0832

Alternate gene names: NA

Gene position: 859860-859285 (Counterclockwise)

Preceding gene: 34496288

Following gene: 34496286

Centisome position: 18.1

GC content: 61.28

Gene sequence:

>576_bases
ATGATACGGATCAACCTCCTTCCCCACCGAGAGCAGAAAAAGGCAGCCCATCGGCTGCGCTTCCAACTGATGCTGGGCGC
CACCGTGCTCGCTTCGCTGCTGCTGCTGACCATAGGCTATCTGACGCTGCAGCACCAGATAGCCGGCCAGGAAGCGCGCA
ACCTCTTTCTGCAAAAGGAAATCGGCAAGCTGGACCGGCAGATTAAGGACATCGGCAAGCTGAAGAAACAACGCGACGAC
CTGCTGGCGCGCAAGCAGCTGGTAGAGCGGCTGCAGGAAGGCCGCAACTCCGCGGTGCACCTGTTCGACCAACTCGTGCG
CCAGACGCCGGACGGCGTCTACCTGAAAAGCTTCAAACAGACCGGCAACCAGGTGACGCTGACCGGCTACGCCCAATCGG
GAGCAAGGGTCTCCAGCTATATGCGCCTGCTCGGCCAGTCCGAGACCTTCGACGCGCCGGTGCTGGTGGAAGTCAGCTCA
AGCATCGTCAACAACCAGCGCGTCAGCGCGTTTACCCTTAATGCGGGCATAAGGCAAAGCCCGCCCGCCAACAAACCCGC
CGGAGCCACGCCATGA

Upstream 100 bases:

>100_bases
CACCCTGGTGCAGGCGCCCGGCATCCGGCTGAAGGAGCTGTTGATGGACGCGCCATCGCTGCTGATCGCCTGCGGCCTGG
CGCTCAGGAGGTTCGACTGA

Downstream 100 bases:

>100_bases
CGCTGGACGAACTGCGCGCGCTCGACCCCAAGGACATGCCCAACTGGCCGCTGCAGGCGCAGGGACTGATGATGTTTCTG
CTGCTGCTGCTGGTGGTCGG

Product: type 4 fimbrial biogenesis protein PilN

Products: NA

Alternate protein names: Fimbrial Assembly; Type IV Pilus Biogenesis Protein PilN; Type 4 Fimbrial Biogenesis Protein PilN; Tfp Pilus Assembly Protein PilN; Fimbrial Assembly Protein; Type IV Pilus Assembly Protein PilN; Fimbrial Assembly Protein PilN; Periplasmic Sensor Signal Transduction Histidine Kinase; Tfp Pilus Assembly Protein; PilN Type IV Pilus Assembly Protein; Type IV Pilus Protein PilN; Type IV Pilus Biogenesis Fimbrial Assembly; Fimbrial Assembly Membrane Protein; LOW QUALITY PROTEIN Tfp Pilus Assembly Protein PilN; Pili Assembly Protein PilN; Type IV Fimbrial Biogenesis Protein PilN; Fimbriae Biogenesis-Like Protein; Type 4 Fimbrial Biogenesis Protein; Type IV Pilus Biogenesis PilN; Fimbrial Type-4 Assembly Transmembrane Protein; Type IV Pilus Assembly Protein Piln

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MIRINLLPHREQKKAAHRLRFQLMLGATVLASLLLLTIGYLTLQHQIAGQEARNLFLQKEIGKLDRQIKDIGKLKKQRDD
LLARKQLVERLQEGRNSAVHLFDQLVRQTPDGVYLKSFKQTGNQVTLTGYAQSGARVSSYMRLLGQSETFDAPVLVEVSS
SIVNNQRVSAFTLNAGIRQSPPANKPAGATP

Sequences:

>Translated_191_residues
MIRINLLPHREQKKAAHRLRFQLMLGATVLASLLLLTIGYLTLQHQIAGQEARNLFLQKEIGKLDRQIKDIGKLKKQRDD
LLARKQLVERLQEGRNSAVHLFDQLVRQTPDGVYLKSFKQTGNQVTLTGYAQSGARVSSYMRLLGQSETFDAPVLVEVSS
SIVNNQRVSAFTLNAGIRQSPPANKPAGATP
>Mature_191_residues
MIRINLLPHREQKKAAHRLRFQLMLGATVLASLLLLTIGYLTLQHQIAGQEARNLFLQKEIGKLDRQIKDIGKLKKQRDD
LLARKQLVERLQEGRNSAVHLFDQLVRQTPDGVYLKSFKQTGNQVTLTGYAQSGARVSSYMRLLGQSETFDAPVLVEVSS
SIVNNQRVSAFTLNAGIRQSPPANKPAGATP

Specific function: Unknown

COG id: COG3166

COG function: function code NU; Tfp pilus assembly protein PilN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21297; Mature: 21297

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRINLLPHREQKKAAHRLRFQLMLGATVLASLLLLTIGYLTLQHQIAGQEARNLFLQKE
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGKLDRQIKDIGKLKKQRDDLLARKQLVERLQEGRNSAVHLFDQLVRQTPDGVYLKSFKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHH
TGNQVTLTGYAQSGARVSSYMRLLGQSETFDAPVLVEVSSSIVNNQRVSAFTLNAGIRQS
CCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEHHHHHHCCCCCEEEEECCCCCCC
PPANKPAGATP
CCCCCCCCCCC
>Mature Secondary Structure
MIRINLLPHREQKKAAHRLRFQLMLGATVLASLLLLTIGYLTLQHQIAGQEARNLFLQKE
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGKLDRQIKDIGKLKKQRDDLLARKQLVERLQEGRNSAVHLFDQLVRQTPDGVYLKSFKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHH
TGNQVTLTGYAQSGARVSSYMRLLGQSETFDAPVLVEVSSSIVNNQRVSAFTLNAGIRQS
CCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEHHHHHHCCCCCEEEEECCCCCCC
PPANKPAGATP
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA