Click here to switch to the map view.

The map label for this gene is pilM

Identifier: 34496288

GI number: 34496288

Start: 859861

End: 860973

Strand: Reverse

Name: pilM

Synonym: CV_0833

Alternate gene names: NA

Gene position: 860973-859861 (Counterclockwise)

Preceding gene: 34496292

Following gene: 34496287

Centisome position: 18.12

GC content: 63.34

Gene sequence:

>1113_bases
ATGCTAGTCGATAAATTGAGGCTCGGGCGCTCCTTGCTCGAACAACTGGGGCTGGGGAAATCCCATAATTCGCCGCTGCT
GGGACTGGACATCAGCAGCACCGCAATCAAGCTGGTAGAACTCTCGCGAAACGGCCGCAACATCCAGGTTGAGCGGTACG
TGATCGAGCCGCTGCCCAAGGATGCGGTCAACGACGGCAACCTGGTCGACATCGAAGGCATCGCCGAGGCGCTGCGCCGC
GGCTGGAAACGGCTGGGCAGTCCGATACGCAGCGTCGCCATCGCCATCCCCACGCCGATGGCCATCTACAAGAAGCTGCT
GGTGCCGGCCAGCCAGACCGAGGACATGGACGAGCTGATCGAGTCCGAGGCCAACCAGATCATTCCCTTTCCGCTCGACG
AGGTGAACCTCGACCACCAGGTGCTGGGCCCGTCGCCGTCCAGCATGGACGACCTGGAAGTGCTGCTGTGCGCCGCGCGC
AAGGAAAAAGTGGAGGAGCGGGTGGCAGTGGTGGAGATGGCCGGCCTGCGCGCGCACGTGGTGGACGTGGAATCGTTCGC
GATGATGACCGCTTTCGAGCAGATCCAGCAGCAGCTGCCGGAAGAAGGCATGAACCAGACCTTCGCCCTGTTCGATATCG
GCGCCACCCGCATCCACTGCAACATCATCCGCAACAACCAGCAGATCTACTACCGCGAGCAGATGTTCGGCGGACACCAG
CTGACCCGCGACGTCCAGCGCCGCTACAACGTCAGCTTCGAGGAGGCGGAAAGCGGCAAACGCAGCATGGCGCTGCCGGA
CGGCTACGAATCCGAGCTGATGCACCCGTTCATCGATTCGCTGGCCCAGGAAATCCAGCGCGCGCTGCAGTTCTTCTACA
CCACGGTCAGCGTGTCGCAGTACCTGCGCGTCGACTACATCCTGCTGGCCGGCGGCTGCAGCATGCTGCCCGGACTGGAC
GACGCAGTGGCCGGACGCTCTCAGATCAGCACCATGATCGCCAACCCGTTCACCACCCTGGTGCAGGCGCCCGGCATCCG
GCTGAAGGAGCTGTTGATGGACGCGCCATCGCTGCTGATCGCCTGCGGCCTGGCGCTCAGGAGGTTCGACTGA

Upstream 100 bases:

>100_bases
TCACTGGAAACCGGATTATAACGTCTTGTGAAAGCCAACAAGACAAACAATGGCGGCAACAGTTCGAATTTCTGTTGCAT
GAGACCGGATCGAGGCGCGG

Downstream 100 bases:

>100_bases
ATGATACGGATCAACCTCCTTCCCCACCGAGAGCAGAAAAAGGCAGCCCATCGGCTGCGCTTCCAACTGATGCTGGGCGC
CACCGTGCTCGCTTCGCTGC

Product: type 4 fimbrial biogenesis protein PilM

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilM; Type 4 Fimbrial Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM; Type Iv Pilus Assembly Protein Pilm; Fimbrial Assembly Membrane Protein; Type IV Pili Biogenesis Protein PilM; Tfp Pilus Assembly Protein; Fimbrial Assembly Protein PilM; Type IV Pilus Assembly Protein; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Protein FtsA; Type IV Fimbrial Biogenesis Protein PilM; PilM Type IV Pilus Assembly Protein; Fimbrial Assembly Protein; Type IV Pilus Biogenesis Protein TapM; Tfp Pilus Assembly Protein ATPase PilM-Like Protein; Type 4 Fimbrial Biogenesis Protein; Pili Assembly Protein; Competence Protein PilM; Type IV Pilus Biogenesis ATPase PilM

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MLVDKLRLGRSLLEQLGLGKSHNSPLLGLDISSTAIKLVELSRNGRNIQVERYVIEPLPKDAVNDGNLVDIEGIAEALRR
GWKRLGSPIRSVAIAIPTPMAIYKKLLVPASQTEDMDELIESEANQIIPFPLDEVNLDHQVLGPSPSSMDDLEVLLCAAR
KEKVEERVAVVEMAGLRAHVVDVESFAMMTAFEQIQQQLPEEGMNQTFALFDIGATRIHCNIIRNNQQIYYREQMFGGHQ
LTRDVQRRYNVSFEEAESGKRSMALPDGYESELMHPFIDSLAQEIQRALQFFYTTVSVSQYLRVDYILLAGGCSMLPGLD
DAVAGRSQISTMIANPFTTLVQAPGIRLKELLMDAPSLLIACGLALRRFD

Sequences:

>Translated_370_residues
MLVDKLRLGRSLLEQLGLGKSHNSPLLGLDISSTAIKLVELSRNGRNIQVERYVIEPLPKDAVNDGNLVDIEGIAEALRR
GWKRLGSPIRSVAIAIPTPMAIYKKLLVPASQTEDMDELIESEANQIIPFPLDEVNLDHQVLGPSPSSMDDLEVLLCAAR
KEKVEERVAVVEMAGLRAHVVDVESFAMMTAFEQIQQQLPEEGMNQTFALFDIGATRIHCNIIRNNQQIYYREQMFGGHQ
LTRDVQRRYNVSFEEAESGKRSMALPDGYESELMHPFIDSLAQEIQRALQFFYTTVSVSQYLRVDYILLAGGCSMLPGLD
DAVAGRSQISTMIANPFTTLVQAPGIRLKELLMDAPSLLIACGLALRRFD
>Mature_370_residues
MLVDKLRLGRSLLEQLGLGKSHNSPLLGLDISSTAIKLVELSRNGRNIQVERYVIEPLPKDAVNDGNLVDIEGIAEALRR
GWKRLGSPIRSVAIAIPTPMAIYKKLLVPASQTEDMDELIESEANQIIPFPLDEVNLDHQVLGPSPSSMDDLEVLLCAAR
KEKVEERVAVVEMAGLRAHVVDVESFAMMTAFEQIQQQLPEEGMNQTFALFDIGATRIHCNIIRNNQQIYYREQMFGGHQ
LTRDVQRRYNVSFEEAESGKRSMALPDGYESELMHPFIDSLAQEIQRALQFFYTTVSVSQYLRVDYILLAGGCSMLPGLD
DAVAGRSQISTMIANPFTTLVQAPGIRLKELLMDAPSLLIACGLALRRFD

Specific function: Unknown

COG id: COG4972

COG function: function code NU; Tfp pilus assembly protein, ATPase PilM

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41241; Mature: 41241

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS01036 HSP70_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVDKLRLGRSLLEQLGLGKSHNSPLLGLDISSTAIKLVELSRNGRNIQVERYVIEPLPK
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHEEHEEECCCCCEEEEEEEEECCCCC
DAVNDGNLVDIEGIAEALRRGWKRLGSPIRSVAIAIPTPMAIYKKLLVPASQTEDMDELI
CCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHEEEECCCCHHHHHHHHCCCCCCCCHHHHH
ESEANQIIPFPLDEVNLDHQVLGPSPSSMDDLEVLLCAARKEKVEERVAVVEMAGLRAHV
HHCCCCCCCCCCHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
VDVESFAMMTAFEQIQQQLPEEGMNQTFALFDIGATRIHCNIIRNNQQIYYREQMFGGHQ
EEHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCEEEEEEEEECCCEEEEHHHHCCCHH
LTRDVQRRYNVSFEEAESGKRSMALPDGYESELMHPFIDSLAQEIQRALQFFYTTVSVSQ
HHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLRVDYILLAGGCSMLPGLDDAVAGRSQISTMIANPFTTLVQAPGIRLKELLMDAPSLLI
HHHHHEEEEECCCCCCCCCCHHHCCHHHHHHHHHCHHHHHHHCCCCHHHHHHHCCHHHHH
ACGLALRRFD
HHHHHHHCCC
>Mature Secondary Structure
MLVDKLRLGRSLLEQLGLGKSHNSPLLGLDISSTAIKLVELSRNGRNIQVERYVIEPLPK
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHEEHEEECCCCCEEEEEEEEECCCCC
DAVNDGNLVDIEGIAEALRRGWKRLGSPIRSVAIAIPTPMAIYKKLLVPASQTEDMDELI
CCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHEEEECCCCHHHHHHHHCCCCCCCCHHHHH
ESEANQIIPFPLDEVNLDHQVLGPSPSSMDDLEVLLCAARKEKVEERVAVVEMAGLRAHV
HHCCCCCCCCCCHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
VDVESFAMMTAFEQIQQQLPEEGMNQTFALFDIGATRIHCNIIRNNQQIYYREQMFGGHQ
EEHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCEEEEEEEEECCCEEEEHHHHCCCHH
LTRDVQRRYNVSFEEAESGKRSMALPDGYESELMHPFIDSLAQEIQRALQFFYTTVSVSQ
HHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLRVDYILLAGGCSMLPGLDDAVAGRSQISTMIANPFTTLVQAPGIRLKELLMDAPSLLI
HHHHHEEEEECCCCCCCCCCHHHCCHHHHHHHHHCHHHHHHHCCCCHHHHHHHCCHHHHH
ACGLALRRFD
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA