| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is aroK
Identifier: 34496283
GI number: 34496283
Start: 855471
End: 856025
Strand: Reverse
Name: aroK
Synonym: CV_0828
Alternate gene names: 34496283
Gene position: 856025-855471 (Counterclockwise)
Preceding gene: 34496284
Following gene: 34496282
Centisome position: 18.02
GC content: 63.96
Gene sequence:
>555_bases ATGCCTGCCATGGAGAAACTGGCAGGCAACTTTTTTCTGGTCGGTCTGATGGGCGCGGGCAAGACCACGGTGGGCAGAGC GCTGGCGCGCCGCACCGGCAAAACGTTCTACGACTCCGACCAGGAGATCGAGGCGCGCACCGGCGTGCGCGTGGCCACCA TCTTCGACATCGAAGGCGAAATGCGCTTCCGCAACCGCGAGGCCTGCGTGATCCGCGACCTGGCCCAGCAGCGCGACATC GTGCTCGCCACCGGCGGCGGCGCTGTGCTGCGCGAGGAAAACCGCAAGGTGCTGGCCAGCCACGGCACAGTGATCTACCT GCGCGCCTCGATAGACGACCTTCTGGCCCGCACCCAGCACGACAAGAACCGTCCGCTGCTGCAGATCGCCGACCCTCGCG CCAAACTGGAAAGCCTGTTCAACGAGCGCGATCCGTTTTACCGCGAAATCGCCGACATCATCATCGACACCACCCAGCAG AACGTCAATCTGCTGGTCGGCCGTCTGGTCGACCAGTTGTTGGACTCCCCGCACCATCCCAAGGAAACCGACTAG
Upstream 100 bases:
>100_bases CGCAGCGAACTGCTGATTTTCATCACGCCCAAAGTGATCAACGACCTGGTCGCCGAGTCTCGCTAAGCGGCCAAGACAGA TTCGTTAACGATCGGCTACA
Downstream 100 bases:
>100_bases TGATCACCCTCGACCTGATCCTGCCCGACACCCGATACCCGATACACATTGGCCACGGACTTCTGGAACAGGTCGACCTG CTGCTACCCCACCTGCCGCT
Product: shikimate kinase
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MPAMEKLAGNFFLVGLMGAGKTTVGRALARRTGKTFYDSDQEIEARTGVRVATIFDIEGEMRFRNREACVIRDLAQQRDI VLATGGGAVLREENRKVLASHGTVIYLRASIDDLLARTQHDKNRPLLQIADPRAKLESLFNERDPFYREIADIIIDTTQQ NVNLLVGRLVDQLLDSPHHPKETD
Sequences:
>Translated_184_residues MPAMEKLAGNFFLVGLMGAGKTTVGRALARRTGKTFYDSDQEIEARTGVRVATIFDIEGEMRFRNREACVIRDLAQQRDI VLATGGGAVLREENRKVLASHGTVIYLRASIDDLLARTQHDKNRPLLQIADPRAKLESLFNERDPFYREIADIIIDTTQQ NVNLLVGRLVDQLLDSPHHPKETD >Mature_183_residues PAMEKLAGNFFLVGLMGAGKTTVGRALARRTGKTFYDSDQEIEARTGVRVATIFDIEGEMRFRNREACVIRDLAQQRDIV LATGGGAVLREENRKVLASHGTVIYLRASIDDLLARTQHDKNRPLLQIADPRAKLESLFNERDPFYREIADIIIDTTQQN VNLLVGRLVDQLLDSPHHPKETD
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family
Homologues:
Organism=Escherichia coli, GI87082255, Length=165, Percent_Identity=52.1212121212121, Blast_Score=171, Evalue=2e-44, Organism=Escherichia coli, GI1786587, Length=153, Percent_Identity=37.9084967320261, Blast_Score=98, Evalue=3e-22,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): AROK_CHRVO (Q7NZU3)
Other databases:
- EMBL: AE016825 - RefSeq: NP_900498.1 - ProteinModelPortal: Q7NZU3 - SMR: Q7NZU3 - GeneID: 2549258 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_0828 - NMPDR: fig|243365.1.peg.828 - HOGENOM: HBG335815 - OMA: VIYLRAN - PhylomeDB: Q7NZU3 - ProtClustDB: CLSK2485332 - BioCyc: CVIO243365:CV_0828-MONOMER - BRENDA: 2.7.1.71 - GO: GO:0005737 - HAMAP: MF_00109 - InterPro: IPR000623 - InterPro: IPR023000 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 20671; Mature: 20540
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: BINDING 40-40 BINDING 64-64 BINDING 86-86 BINDING 124-124 BINDING 143-143 BINDING 160-160
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAMEKLAGNFFLVGLMGAGKTTVGRALARRTGKTFYDSDQEIEARTGVRVATIFDIEGE CCCHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCEEEEEEEECCCC MRFRNREACVIRDLAQQRDIVLATGGGAVLREENRKVLASHGTVIYLRASIDDLLARTQH EEECCCCHHHHHHHHHCCCEEEEECCCEEEECCCCEEEECCCCEEEEECCHHHHHHHHCC DKNRPLLQIADPRAKLESLFNERDPFYREIADIIIDTTQQNVNLLVGRLVDQLLDSPHHP CCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC KETD CCCC >Mature Secondary Structure PAMEKLAGNFFLVGLMGAGKTTVGRALARRTGKTFYDSDQEIEARTGVRVATIFDIEGE CCHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCEEEEEEEECCCC MRFRNREACVIRDLAQQRDIVLATGGGAVLREENRKVLASHGTVIYLRASIDDLLARTQH EEECCCCHHHHHHHHHCCCEEEEECCCEEEECCCCEEEECCCCEEEEECCHHHHHHHHCC DKNRPLLQIADPRAKLESLFNERDPFYREIADIIIDTTQQNVNLLVGRLVDQLLDSPHHP CCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC KETD CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782