| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is yfgD [H]
Identifier: 34496225
GI number: 34496225
Start: 791756
End: 792106
Strand: Reverse
Name: yfgD [H]
Synonym: CV_0770
Alternate gene names: 34496225
Gene position: 792106-791756 (Counterclockwise)
Preceding gene: 34496227
Following gene: 34496224
Centisome position: 16.67
GC content: 61.82
Gene sequence:
>351_bases ATGATCCGTCTCTATCACAATCCCAAGTGCTCGAAATCCCGAGCCGCCCTCAGCCTGCTGGAAGAGGCCGGCGCCGAAAT CGAAATCGTCGAGTATCTGAAGCACCCTCCCAGCTATGAGGAACTGGACCAGCTGCTGGGCCTGCTGGGCCTGGAGCCGC GCGAGCTGATGCGCCAGAAGGAAGAGGAGTACGCCGACCTCTACCTGGACGACATCACGTTGGAACGCAAGCATCTGATC GCCGCGATGGTGGACAATCCCAACCTGATCGAACGCCCCATCGCCATCGCGGATGGCCGCGCCGTGATCGGCCGCCCGCC GGAGCGGGTGCTGAATCTGCTGGGCAAATAA
Upstream 100 bases:
>100_bases GCTTTCATGCCACGATGCGCCCCCTTCCCAACCCACAAGCAGCGGGTTATGCTGCCGGCAATGCCGCAGCGGCCCGGATC AACGACAAGGGAGAAGACTC
Downstream 100 bases:
>100_bases GCCTGCCCGTGGCGGCGCCTCCCCCGCCGCCACTCTCCCTCCTTCCCCCGTCTCGCCGGCCCTTCGGCTGCCGCCGTCTA CCGGCCGCCAATCTAACCCA
Product: arsenate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MIRLYHNPKCSKSRAALSLLEEAGAEIEIVEYLKHPPSYEELDQLLGLLGLEPRELMRQKEEEYADLYLDDITLERKHLI AAMVDNPNLIERPIAIADGRAVIGRPPERVLNLLGK
Sequences:
>Translated_116_residues MIRLYHNPKCSKSRAALSLLEEAGAEIEIVEYLKHPPSYEELDQLLGLLGLEPRELMRQKEEEYADLYLDDITLERKHLI AAMVDNPNLIERPIAIADGRAVIGRPPERVLNLLGK >Mature_116_residues MIRLYHNPKCSKSRAALSLLEEAGAEIEIVEYLKHPPSYEELDQLLGLLGLEPRELMRQKEEEYADLYLDDITLERKHLI AAMVDNPNLIERPIAIADGRAVIGRPPERVLNLLGK
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1788841, Length=115, Percent_Identity=54.7826086956522, Blast_Score=124, Evalue=1e-30, Organism=Escherichia coli, GI1789918, Length=113, Percent_Identity=37.1681415929204, Blast_Score=79, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006659 - InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 13215; Mature: 13215
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLYHNPKCSKSRAALSLLEEAGAEIEIVEYLKHPPSYEELDQLLGLLGLEPRELMRQK CEEECCCCCCCHHHHHHHHHHHCCCCEEHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHH EEEYADLYLDDITLERKHLIAAMVDNPNLIERPIAIADGRAVIGRPPERVLNLLGK HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEECCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MIRLYHNPKCSKSRAALSLLEEAGAEIEIVEYLKHPPSYEELDQLLGLLGLEPRELMRQK CEEECCCCCCCHHHHHHHHHHHCCCCEEHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHH EEEYADLYLDDITLERKHLIAAMVDNPNLIERPIAIADGRAVIGRPPERVLNLLGK HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEECCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]