| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is wzc [C]
Identifier: 34496227
GI number: 34496227
Start: 793530
End: 794735
Strand: Reverse
Name: wzc [C]
Synonym: CV_0772
Alternate gene names: 34496227
Gene position: 794735-793530 (Counterclockwise)
Preceding gene: 34496228
Following gene: 34496225
Centisome position: 16.73
GC content: 55.39
Gene sequence:
>1206_bases ATGAGCGTGGATCAGATGAAAGAAATACAGATACAGTCAAGCCAGCCAACTCAAAACGATGAGATCGATTTGACGGCACT TCTGGTTAAGCTGGCTCGACAGCGAAACTGGATCATAGCTTGCACTATCTTGTGCGGGACAGTGACCCTCTGCTATGCCT TGCTGGCCAAGCCGATTTTCACCGCACAAACCAGCATCATGCCTCCGCAACAGCAAAGCAGCGGCATGAGCGCCCTGCTT GGGCAATTGGGTGGATTGGCCGGAGCGGCAGGCGGCATCTCGGGTCTGAAAAATCCGAACGACCTATACATCGGCATGTT GCAGAGCCGCACCGTCGCCGACAAGCTGATTGCCCGTTTCAAGCTGCAATCACGCTATGAGCAAGAAACCGTCGAAGGGG CTCGCAAAACACTGCAACAGAAATCCAGTTTCGTCAGCGGAAAGGATGGCCTAATAGCCGTTGCCGTGGACGATACCGAT CCTCAATTTGCCGCCACACTGGCGAATGCCTACGTTGATGAACTGAAGGCGCTCAATCGCTCGCTAGCCGTCACTGACGC CGCCAAGCGCCGTCTGTTCTTCGAACAGCAGCTGAAAGACACCAAGGCGCAATTGGCGGCGGCAGAGACAGACTTGCGCA AGACACAGGAAGCGACGGGCCTGATCCTGCCTGAGGGTCAATTGCCGGCCATTGTGTCCTCCGTCACCCAGCTGCGCGCC ACCATCGCGGCCAAAGAAGTCCAACTGGAGGCGATGAAAAGCTTCGCGACAGCTCAGAATCCTGCCTACATCAAAGCACA GCAGGAGTTGAGCGGCCTGCACGAGCAATTGGCCAAGCTGGAAACCGGCCAACGCGGCAACGGCGACCTATTGGTTCCAA CCGGGAAGTTTGCGCAGAGCGGCTTGGAATACATGCGCAAGCTGCGTGAACTGAAATATCAGGAAACCATTTTCGAACTG CTGTCCAAACAGTACGAATTGGCGAAGATAGACGAAGCCAAGGATTCCTCGCTGATTCAAGTACTGGATACGGCGGTCCC CCCTGAACTCAAGAGCAAACCAAAGCGATCCCTTATCGTGATGCTTGGCTTGCTCGGGGGATTGATGATAGGCATACTCA GCGCCTTGCTGCGCGATTTGTTTCAGAGTGAGCACTCCCAGCAGCGGCGGCGCCAACTGTTGCTCGCTCTCAAGAGCAGC CAATGA
Upstream 100 bases:
>100_bases CAGAAGAATTGAACACTGGTAGCTGGACTCAAGCACTCAAGGAATGGACCACCATTCTCTATCAATTCGGTCTGGGCGCT GCGGGTCTGAAAGTACTGAA
Downstream 100 bases:
>100_bases TAAACAAACCGGTCGTCCTCAAACGGCCGGTTTGTTTTCGTCCTTCCCAAGCTGTCTAAACCGATATCCCATCCGGCAGA TAAATCCCAGCAGCAGCAGC
Product: hypothetical protein
Products: ADP; protein tyrosine phosphate [C]
Alternate protein names: Lipopolysaccharide Biosynthesis; Chain Length Determinant Protein Domain Protein; Chain Length Determinant Domain-Containing Protein; Capsule Polysaccharide Export Protein
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MSVDQMKEIQIQSSQPTQNDEIDLTALLVKLARQRNWIIACTILCGTVTLCYALLAKPIFTAQTSIMPPQQQSSGMSALL GQLGGLAGAAGGISGLKNPNDLYIGMLQSRTVADKLIARFKLQSRYEQETVEGARKTLQQKSSFVSGKDGLIAVAVDDTD PQFAATLANAYVDELKALNRSLAVTDAAKRRLFFEQQLKDTKAQLAAAETDLRKTQEATGLILPEGQLPAIVSSVTQLRA TIAAKEVQLEAMKSFATAQNPAYIKAQQELSGLHEQLAKLETGQRGNGDLLVPTGKFAQSGLEYMRKLRELKYQETIFEL LSKQYELAKIDEAKDSSLIQVLDTAVPPELKSKPKRSLIVMLGLLGGLMIGILSALLRDLFQSEHSQQRRRQLLLALKSS Q
Sequences:
>Translated_401_residues MSVDQMKEIQIQSSQPTQNDEIDLTALLVKLARQRNWIIACTILCGTVTLCYALLAKPIFTAQTSIMPPQQQSSGMSALL GQLGGLAGAAGGISGLKNPNDLYIGMLQSRTVADKLIARFKLQSRYEQETVEGARKTLQQKSSFVSGKDGLIAVAVDDTD PQFAATLANAYVDELKALNRSLAVTDAAKRRLFFEQQLKDTKAQLAAAETDLRKTQEATGLILPEGQLPAIVSSVTQLRA TIAAKEVQLEAMKSFATAQNPAYIKAQQELSGLHEQLAKLETGQRGNGDLLVPTGKFAQSGLEYMRKLRELKYQETIFEL LSKQYELAKIDEAKDSSLIQVLDTAVPPELKSKPKRSLIVMLGLLGGLMIGILSALLRDLFQSEHSQQRRRQLLLALKSS Q >Mature_400_residues SVDQMKEIQIQSSQPTQNDEIDLTALLVKLARQRNWIIACTILCGTVTLCYALLAKPIFTAQTSIMPPQQQSSGMSALLG QLGGLAGAAGGISGLKNPNDLYIGMLQSRTVADKLIARFKLQSRYEQETVEGARKTLQQKSSFVSGKDGLIAVAVDDTDP QFAATLANAYVDELKALNRSLAVTDAAKRRLFFEQQLKDTKAQLAAAETDLRKTQEATGLILPEGQLPAIVSSVTQLRAT IAAKEVQLEAMKSFATAQNPAYIKAQQELSGLHEQLAKLETGQRGNGDLLVPTGKFAQSGLEYMRKLRELKYQETIFELL SKQYELAKIDEAKDSSLIQVLDTAVPPELKSKPKRSLIVMLGLLGGLMIGILSALLRDLFQSEHSQQRRRQLLLALKSSQ
Specific function: Required For The Extracellular Polysaccharide Colanic Acid Synthesis. The Autophosphorylated Form Is Inactive. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Inner membrane (Probable) [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.112 [C]
Molecular weight: Translated: 43858; Mature: 43727
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDQMKEIQIQSSQPTQNDEIDLTALLVKLARQRNWIIACTILCGTVTLCYALLAKPIF CCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHH TAQTSIMPPQQQSSGMSALLGQLGGLAGAAGGISGLKNPNDLYIGMLQSRTVADKLIARF HHHCCCCCCCHHHCCHHHHHHHHHCHHHCCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHH KLQSRYEQETVEGARKTLQQKSSFVSGKDGLIAVAVDDTDPQFAATLANAYVDELKALNR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH SLAVTDAAKRRLFFEQQLKDTKAQLAAAETDLRKTQEATGLILPEGQLPAIVSSVTQLRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHH TIAAKEVQLEAMKSFATAQNPAYIKAQQELSGLHEQLAKLETGQRGNGDLLVPTGKFAQS HHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHH GLEYMRKLRELKYQETIFELLSKQYELAKIDEAKDSSLIQVLDTAVPPELKSKPKRSLIV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCHHHCCCHHHHHH MLGLLGGLMIGILSALLRDLFQSEHSQQRRRQLLLALKSSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVDQMKEIQIQSSQPTQNDEIDLTALLVKLARQRNWIIACTILCGTVTLCYALLAKPIF CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHH TAQTSIMPPQQQSSGMSALLGQLGGLAGAAGGISGLKNPNDLYIGMLQSRTVADKLIARF HHHCCCCCCCHHHCCHHHHHHHHHCHHHCCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHH KLQSRYEQETVEGARKTLQQKSSFVSGKDGLIAVAVDDTDPQFAATLANAYVDELKALNR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH SLAVTDAAKRRLFFEQQLKDTKAQLAAAETDLRKTQEATGLILPEGQLPAIVSSVTQLRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHH TIAAKEVQLEAMKSFATAQNPAYIKAQQELSGLHEQLAKLETGQRGNGDLLVPTGKFAQS HHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHH GLEYMRKLRELKYQETIFELLSKQYELAKIDEAKDSSLIQVLDTAVPPELKSKPKRSLIV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCHHHCCCHHHHHH MLGLLGGLMIGILSALLRDLFQSEHSQQRRRQLLLALKSSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; a protein tyrosine [C]
Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA