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The map label for this gene is emrR [H]

Identifier: 34496224

GI number: 34496224

Start: 791066

End: 791566

Strand: Reverse

Name: emrR [H]

Synonym: CV_0769

Alternate gene names: 34496224

Gene position: 791566-791066 (Counterclockwise)

Preceding gene: 34496225

Following gene: 34496223

Centisome position: 16.66

GC content: 63.27

Gene sequence:

>501_bases
ATGAGTCCAAACAAGTCCTTTTCCCAGTTGGAGCAAGCGATCAACCGCGTCGAATCGCGCTTTCCCGGCGTGCCCCGCCA
GGAAGTGATCCTGACCCGCCTGATCTTCCACATCGTGCCGCGGCTGACCTCCCATCTGTGCGAGTGCCTGAAGCAGCATG
GCCTGAACGAGACGGTGTGGATGGCGCTGCTGGCCTTGTACGCCTGTCCGAACCAGATGCTGAATCCATCGGATATCAGC
GAAACGCTGGACTCCTCGCGCACCAATGCCACCCGCATCGCGGACGAGTTGGTGAAAAACGGCTGGGCCGCGCGCTCGGC
CAGCGCCGAGGACCGGCGGAAGATCGTGCTGGAGTTGACGCCTGCCGGCGTGGAGCTGGTGGAAGGCCTGCTGCCCTACT
CCCGCGAAATCCACCGCTCGCTGTGGGCCGACTTCGAAGCCGACGAGAAAGCCGAACTGGAACGGCTGATGCGCAAGCTC
CTGAGCAAGCTCGGCGGCTGA

Upstream 100 bases:

>100_bases
AATCTAACCCATTGTCATTTCGCCACACTTTTCGCCAGCATTTCATTAGCAAGGTTATTATTACTTGCAAAATAATACCG
CACGTTACTAAAATGGCCGC

Downstream 100 bases:

>100_bases
GCCCGCGCTTTTTCACTCGAATAATAACCCGGGTGATTATCACCAGATTAATCACGTCCGGACCGACATGCATCATTGAT
GGAGACCGACAAGGTGAACA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Protein emrR [H]

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSPNKSFSQLEQAINRVESRFPGVPRQEVILTRLIFHIVPRLTSHLCECLKQHGLNETVWMALLALYACPNQMLNPSDIS
ETLDSSRTNATRIADELVKNGWAARSASAEDRRKIVLELTPAGVELVEGLLPYSREIHRSLWADFEADEKAELERLMRKL
LSKLGG

Sequences:

>Translated_166_residues
MSPNKSFSQLEQAINRVESRFPGVPRQEVILTRLIFHIVPRLTSHLCECLKQHGLNETVWMALLALYACPNQMLNPSDIS
ETLDSSRTNATRIADELVKNGWAARSASAEDRRKIVLELTPAGVELVEGLLPYSREIHRSLWADFEADEKAELERLMRKL
LSKLGG
>Mature_165_residues
SPNKSFSQLEQAINRVESRFPGVPRQEVILTRLIFHIVPRLTSHLCECLKQHGLNETVWMALLALYACPNQMLNPSDISE
TLDSSRTNATRIADELVKNGWAARSASAEDRRKIVLELTPAGVELVEGLLPYSREIHRSLWADFEADEKAELERLMRKLL
SKLGG

Specific function: Negative regulator of the multidrug operon emrAB [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789040, Length=161, Percent_Identity=43.4782608695652, Blast_Score=127, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18766; Mature: 18635

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPNKSFSQLEQAINRVESRFPGVPRQEVILTRLIFHIVPRLTSHLCECLKQHGLNETVW
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
MALLALYACPNQMLNPSDISETLDSSRTNATRIADELVKNGWAARSASAEDRRKIVLELT
HHHHHHHHCCHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHCC
PAGVELVEGLLPYSREIHRSLWADFEADEKAELERLMRKLLSKLGG
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SPNKSFSQLEQAINRVESRFPGVPRQEVILTRLIFHIVPRLTSHLCECLKQHGLNETVW
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
MALLALYACPNQMLNPSDISETLDSSRTNATRIADELVKNGWAARSASAEDRRKIVLELT
HHHHHHHHCCHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHCC
PAGVELVEGLLPYSREIHRSLWADFEADEKAELERLMRKLLSKLGG
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]