Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34496183

Identifier: 34496183

GI number: 34496183

Start: 751152

End: 751661

Strand: Reverse

Name: 34496183

Synonym: CV_0728

Alternate gene names: NA

Gene position: 751661-751152 (Counterclockwise)

Preceding gene: 34496184

Following gene: 34496182

Centisome position: 15.82

GC content: 71.18

Gene sequence:

>510_bases
ATGGATCCCCAATTCCTGTCCGACTGGTTGCGGAGCCTCGACGACGGCTGGCAACGGCTGGCAGAGGCCGGCCTGCCCGA
TGAGCGGGCGTGGAAAGGCGCGCTCAAAGCCTGGCTGGACTGCGGCCAGCGCCTGGCGGAACGGCAGCAGGAGACGCAGC
GCCAATGGTCCGAGGCCTGGCTGCGGCGCGCGGGCGCGGACTCGCTGTTGGCCTTTTGCCGCCAATGCGACGAGGTCTGC
ACCGAGTTCGCCCGGCAAAGCCTGCTCTGGCAGCTGGAGTGGAGCGCCGGGCTGCGGCGCCAGGCCGGCGAACTGGCGGG
CTCTCTGCTGCAGGCGCGGGGCGAGGGCGACGCGCTGCTGGCCCTCAACGCCGCCGTCCAGAGCGGACGCCAGAGCTGGG
ACGAACAACTGGAGGCCTTGCAGCAGACGCTGAGCGAGTTGTCGCCGGCGCTGGCGCAGAACCTGCAGCAATGGCTGACG
CCGCCGCCCGAGAACCCGCCCGAGACCTGA

Upstream 100 bases:

>100_bases
CCGGCCAATCCCGACTACTACGCCAAGCACGCGCCGCAGATGTCCGCCATCCGCGCGATGCTCGACCGCCTGAACAGCCA
CCGCAAATAAGGAGCAAGCC

Downstream 100 bases:

>100_bases
ATCGCCGCCCCGGCGCCGGGGCGGCGCCCACCACCCTGAAATGGAGAACACGCGATGAAAACCAACGCAGCAGGCATCAG
CCTGATCAAGCAATTCGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MDPQFLSDWLRSLDDGWQRLAEAGLPDERAWKGALKAWLDCGQRLAERQQETQRQWSEAWLRRAGADSLLAFCRQCDEVC
TEFARQSLLWQLEWSAGLRRQAGELAGSLLQARGEGDALLALNAAVQSGRQSWDEQLEALQQTLSELSPALAQNLQQWLT
PPPENPPET

Sequences:

>Translated_169_residues
MDPQFLSDWLRSLDDGWQRLAEAGLPDERAWKGALKAWLDCGQRLAERQQETQRQWSEAWLRRAGADSLLAFCRQCDEVC
TEFARQSLLWQLEWSAGLRRQAGELAGSLLQARGEGDALLALNAAVQSGRQSWDEQLEALQQTLSELSPALAQNLQQWLT
PPPENPPET
>Mature_169_residues
MDPQFLSDWLRSLDDGWQRLAEAGLPDERAWKGALKAWLDCGQRLAERQQETQRQWSEAWLRRAGADSLLAFCRQCDEVC
TEFARQSLLWQLEWSAGLRRQAGELAGSLLQARGEGDALLALNAAVQSGRQSWDEQLEALQQTLSELSPALAQNLQQWLT
PPPENPPET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19099; Mature: 19099

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPQFLSDWLRSLDDGWQRLAEAGLPDERAWKGALKAWLDCGQRLAERQQETQRQWSEAW
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRRAGADSLLAFCRQCDEVCTEFARQSLLWQLEWSAGLRRQAGELAGSLLQARGEGDALL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ALNAAVQSGRQSWDEQLEALQQTLSELSPALAQNLQQWLTPPPENPPET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDPQFLSDWLRSLDDGWQRLAEAGLPDERAWKGALKAWLDCGQRLAERQQETQRQWSEAW
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRRAGADSLLAFCRQCDEVCTEFARQSLLWQLEWSAGLRRQAGELAGSLLQARGEGDALL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ALNAAVQSGRQSWDEQLEALQQTLSELSPALAQNLQQWLTPPPENPPET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA